MGE detailed information
MGE type: Genomic_island MGE length: 50102 bp
Accession: NZ_CP075649 Location: 4630562..4680663 Organism: Escherichia coli strain STEC17-190 Replicon: chromosome
Accession: NZ_CP075649 Location: 4630562..4680663 Organism: Escherichia coli strain STEC17-190 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX56_RS22205 (4625705) | 4625705..4626202 | + | 498 | WP_000098937.1 | type VI secretion system contractile sheath small subunit | - |
| JFX56_RS22210 (4626223) | 4626223..4626540 | + | 318 | Protein_4378 | type VI secretion system contractile sheath large subunit | - |
| JFX56_RS22220 (4628226) | 4628226..4629782 | + | 1557 | WP_136755787.1 | L-lactate permease | - |
| JFX56_RS22225 (4629832) | 4629832..4630551 | + | 720 | WP_001102090.1 | (Fe-S)-binding protein | - |
| JFX56_RS22230 (4630562) | 4630562..4631977 | + | 1416 | WP_000054156.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| JFX56_RS22235 (4631981) | 4631981..4632679 | + | 699 | WP_000431499.1 | lactate utilization protein C | - |
| JFX56_RS22240 (4633135) | 4633135..4633691 | - | 557 | Protein_4384 | IS3 family transposase IS1203 | Transposase |
| JFX56_RS22245 (4633906) | 4633906..4635453 | - | 1548 | WP_001294844.1 | hypothetical protein | - |
| JFX56_RS22250 (4635453) | 4635453..4640411 | - | 4959 | WP_000877067.1 | AAA domain-containing protein | - |
| JFX56_RS22255 (4640619) | 4640619..4640774 | + | 156 | Protein_4387 | integrase | - |
| JFX56_RS22260 (4640811) | 4640811..4642014 | - | 1204 | Protein_4388 | IS3 family transposase ISEc48 | Transposase |
| JFX56_RS22265 (4642092) | 4642092..4642364 | - | 273 | WP_000323312.1 | hypothetical protein | - |
| JFX56_RS22270 (4642398) | 4642398..4642589 | - | 192 | WP_000264907.1 | hypothetical protein | - |
| JFX56_RS22275 (4642599) | 4642599..4642964 | - | 366 | WP_001370958.1 | hypothetical protein | - |
| JFX56_RS22280 (4642975) | 4642975..4643166 | - | 192 | WP_000789656.1 | hypothetical protein | - |
| JFX56_RS22285 (4643456) | 4643456..4647547 | - | 4092 | WP_001034014.1 | hypothetical protein | VF |
| JFX56_RS22290 (4648460) | 4648460..4649197 | - | 738 | WP_000634452.1 | AraC family transcriptional regulator | - |
| JFX56_RS22295 (4649295) | 4649295..4649488 | - | 194 | Protein_4395 | IS66 family transposase ISEc23 | Transposase |
| JFX56_RS22300 (4650029) | 4650029..4652119 | + | 2091 | WP_001223349.1 | bifunctional siderophore receptor/adhesin Iha | - |
| JFX56_RS22305 (4652260) | 4652260..4652451 | - | 192 | Protein_4397 | IS256 family transposase ISEic2 | Transposase |
| JFX56_RS22310 (4652465) | 4652465..4654309 | - | 1845 | WP_000593013.1 | Vitamin B12 transporter BtuB | VF |
| JFX56_RS22315 (4654683) | 4654683..4654781 | + | 99 | Protein_4399 | beta-ketoacyl-ACP synthase IV | - |
| JFX56_RS24875 (4655012) | 4655012..4655281 | - | 270 | Protein_4400 | hypothetical protein | - |
| JFX56_RS22320 (4655678) | 4655678..4656709 | - | 1032 | WP_000416157.1 | LacI family DNA-binding transcriptional regulator | - |
| JFX56_RS22325 (4656980) | 4656980..4657423 | + | 444 | WP_000916811.1 | PTS sugar transporter subunit IIA | - |
| JFX56_RS22330 (4657439) | 4657439..4657726 | + | 288 | WP_000705928.1 | PTS sugar transporter subunit IIB | - |
| JFX56_RS22335 (4657739) | 4657739..4658995 | + | 1257 | WP_000345347.1 | PTS ascorbate transporter subunit IIC | - |
| JFX56_RS22345 (4659559) | 4659559..4659837 | + | 279 | Protein_4405 | transposase | - |
| JFX56_RS22350 (4660213) | 4660213..4660473 | + | 261 | Protein_4406 | IS3 family transposase ISSfl10 | Transposase |
| JFX56_RS24880 (4660455) | 4660455..4660541 | + | 87 | Protein_4407 | IS3 family transposase ISSfl10 | Transposase |
| JFX56_RS22355 (4660538) | 4660538..4661689 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| JFX56_RS22360 (4661696) | 4661696..4662596 | + | 901 | Protein_4409 | IS3 family transposase ISSd1 | Transposase |
| JFX56_RS22365 (4663340) | 4663340..4663567 | + | 228 | WP_000483811.1 | DUF465 domain-containing protein | - |
| JFX56_RS22370 (4663945) | 4663945..4664520 | + | 576 | WP_001238642.1 | division/outer membrane stress-associated lipid-binding lipoprotein | - |
| JFX56_RS22375 (4664950) | 4664950..4666227 | - | 1278 | WP_001499293.1 | YadA-like family protein | - |
| JFX56_RS22380 (4666457) | 4666457..4666882 | + | 426 | WP_000422722.1 | IS66 family transposase ISEc23 | Transposase |
| JFX56_RS22385 (4666879) | 4666879..4667229 | + | 351 | WP_000624684.1 | IS66 family transposase ISEc47 | Transposase |
| JFX56_RS22390 (4667260) | 4667260..4668873 | + | 1614 | WP_001499133.1 | IS66 family transposase ISEc43 | Transposase |
| JFX56_RS22395 (4668996) | 4668996..4670000 | + | 1005 | WP_001179707.1 | IS110 family transposase ISSfl8 | Transposase |
| JFX56_RS22400 (4670282) | 4670282..4670563 | + | 282 | Protein_4417 | DUF4942 domain-containing protein | - |
| JFX56_RS22405 (4671312) | 4671312..4672850 | + | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JFX56_RS22410 (4673216) | 4673216..4674550 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JFX56_RS22415 (4674630) | 4674630..4676777 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JFX56_RS22420 (4676836) | 4676836..4678293 | + | 1458 | WP_000856832.1 | dipeptide/tripeptide permease DtpC | - |
| JFX56_RS22425 (4678530) | 4678530..4680047 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| JFX56_RS22430 (4680166) | 4680166..4680339 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JFX56_RS22435 (4680367) | 4680367..4680663 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JFX56_RS22440 (4680890) | 4680890..4681162 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| JFX56_RS22445 (4681174) | 4681174..4681404 | - | 231 | WP_000371698.1 | 4Fe-4S mono-cluster protein YjdI | - |
| JFX56_RS22450 (4681585) | 4681585..4683216 | + | 1632 | WP_136755720.1 | sensor histidine kinase | - |
| JFX56_RS22455 (4683213) | 4683213..4683932 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|