MGE detailed information
MGE type: IScluster/Tn MGE length: 3966 bp
Accession: NZ_CP075484 Location: 3040865..3044830 Organism: Escherichia coli strain NT1N25 Replicon: chromosome
Accession: NZ_CP075484 Location: 3040865..3044830 Organism: Escherichia coli strain NT1N25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI28_RS15040 (3036010) | 3036010..3036678 | + | 669 | WP_000464491.1 | arginine ABC transporter permease ArtM | - |
| IGI28_RS15045 (3036970) | 3036970..3037701 | + | 732 | WP_001295905.1 | arginine ABC transporter substrate-binding protein ArtJ | - |
| IGI28_RS15050 (3037876) | 3037876..3039003 | - | 1128 | WP_001149732.1 | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | - |
| IGI28_RS15055 (3039044) | 3039044..3039532 | - | 489 | WP_000389260.1 | YbjO family protein | - |
| IGI28_RS15060 (3039592) | 3039592..3040437 | - | 846 | WP_001061657.1 | putrescine ABC transporter permease PotI | - |
| IGI28_RS15065 (3040434) | 3040434..3040895 | - | 462 | Protein_2867 | ABC transporter permease subunit | - |
| IGI28_RS15070 (3040898) | 3040898..3041727 | - | 830 | Protein_2868 | IS3 family transposase ISEc14 | Transposase |
| IGI28_RS15075 (3041932) | 3041932..3042348 | - | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IGI28_RS15080 (3042345) | 3042345..3042575 | - | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| IGI28_RS23470 (3042532) | 3042532..3042786 | + | 255 | Protein_2871 | hypothetical protein | - |
| IGI28_RS15085 (3042774) | 3042774..3043265 | - | 492 | Protein_2872 | IS5 family transposase ISKpn26 | Transposase |
| IGI28_RS15090 (3043568) | 3043568..3044830 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| IGI28_RS15095 (3045018) | 3045018..3045512 | - | 495 | Protein_2874 | putrescine ABC transporter permease PotH | - |
| IGI28_RS15100 (3045522) | 3045522..3046655 | - | 1134 | WP_000996018.1 | putrescine ABC transporter ATP-binding subunit PotG | - |
| IGI28_RS15105 (3046750) | 3046750..3047862 | - | 1113 | WP_000126084.1 | spermidine/putrescine ABC transporter substrate-binding protein PotF | - |
| IGI28_RS15110 (3048213) | 3048213..3048689 | - | 477 | WP_000203025.1 | YbjN domain-containing protein | - |
| IGI28_RS15115 (3048777) | 3048777..3049679 | - | 903 | WP_000684321.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|