MGE detailed information
MGE type: Prophage MGE length: 70613 bp
Accession: NZ_CP075480 Location: 2216425..2287037 Organism: Escherichia coli strain NT1N31 Replicon: chromosome
Accession: NZ_CP075480 Location: 2216425..2287037 Organism: Escherichia coli strain NT1N31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI30_RS10625 (2213800) | 2213800..2216226 | - | 2427 | WP_032161813.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| IGI30_RS10630 (2216425) | 2216425..2216730 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| IGI30_RS10635 (2216838) | 2216838..2217548 | + | 711 | WP_072134188.1 | YnfC family lipoprotein | - |
| IGI30_RS10640 (2217551) | 2217551..2218111 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IGI30_RS10645 (2218146) | 2218146..2218487 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| IGI30_RS10650 (2218622) | 2218622..2218948 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| IGI30_RS10655 (2219154) | 2219154..2220368 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| IGI30_RS10660 (2220380) | 2220380..2221399 | + | 1020 | WP_052931303.1 | Zn-dependent oxidoreductase | - |
| IGI30_RS10665 (2221587) | 2221587..2222867 | - | 1281 | WP_000876979.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IGI30_RS10670 (2222902) | 2222902..2223153 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| IGI30_RS10675 (2223226) | 2223226..2225697 | - | 2472 | WP_001515375.1 | exonuclease | - |
| IGI30_RS10680 (2225819) | 2225819..2226516 | + | 698 | WP_223411729.1 | IS1 family transposase IS1S | Transposase |
| IGI30_RS10685 (2226526) | 2226526..2227410 | + | 885 | WP_225907802.1 | hypothetical protein | - |
| IGI30_RS10695 (2227451) | 2227451..2227873 | + | 423 | WP_097444841.1 | DUF977 family protein | - |
| IGI30_RS10700 (2227870) | 2227870..2228359 | + | 490 | Protein_2098 | class I SAM-dependent methyltransferase | - |
| IGI30_RS23335 (2228649) | 2228649..2228774 | + | 126 | WP_001315551.1 | hypothetical protein | - |
| IGI30_RS10710 (2228837) | 2228837..2229257 | + | 421 | Protein_2100 | hypothetical protein | - |
| IGI30_RS10715 (2229913) | 2229913..2231010 | + | 1098 | Protein_2101 | ISNCY family transposase ISCARN112 | Transposase |
| IGI30_RS23125 (2231083) | 2231083..2231232 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| IGI30_RS10720 (2231669) | 2231669..2232001 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| IGI30_RS10725 (2232204) | 2232204..2232509 | - | 306 | WP_072134164.1 | protein YdfV | - |
| IGI30_RS10730 (2232534) | 2232534..2232773 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IGI30_RS10735 (2232773) | 2232773..2233060 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IGI30_RS10740 (2233132) | 2233132..2233287 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IGI30_RS10745 (2233504) | 2233504..2233755 | + | 252 | WP_001463433.1 | protein Rem | - |
| IGI30_RS10750 (2233822) | 2233822..2234100 | + | 279 | WP_001515373.1 | hypothetical protein | - |
| IGI30_RS10755 (2234102) | 2234102..2235151 | + | 1050 | WP_193107722.1 | DUF968 domain-containing protein | - |
| IGI30_RS10760 (2235169) | 2235169..2235546 | + | 378 | WP_001204787.1 | antiterminator Q family protein | - |
| IGI30_RS10765 (2235702) | 2235702..2236226 | - | 525 | WP_000780584.1 | lipocalin family protein | - |
| IGI30_RS10770 (2236419) | 2236419..2237378 | + | 960 | WP_000592549.1 | DUF523 and DUF1722 domain-containing protein | - |
| IGI30_RS10775 (2237785) | 2237785..2238498 | + | 714 | WP_001146314.1 | HTH-type transcriptional activator RhaR | VF |
| IGI30_RS10780 (2238689) | 2238689..2238904 | + | 216 | WP_193107723.1 | phage lysis protein EssD | - |
| IGI30_RS10785 (2238909) | 2238909..2239223 | + | 315 | WP_001515370.1 | YdfR family protein | - |
| IGI30_RS10790 (2239279) | 2239279..2239812 | + | 534 | WP_001515369.1 | lysozyme | - |
| IGI30_RS10795 (2239809) | 2239809..2240306 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| IGI30_RS10800 (2240649) | 2240649..2241346 | + | 698 | WP_223411729.1 | IS1 family transposase IS1S | Transposase |
| IGI30_RS10805 (2241445) | 2241445..2241657 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IGI30_RS10810 (2241668) | 2241668..2241856 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| IGI30_RS10815 (2241859) | 2241859..2241924 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| IGI30_RS10820 (2242003) | 2242003..2242158 | + | 156 | WP_001309517.1 | protein YnfN | - |
| IGI30_RS10825 (2242330) | 2242330..2242503 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| IGI30_RS10830 (2242655) | 2242655..2243065 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| IGI30_RS10835 (2243123) | 2243123..2243356 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| IGI30_RS10840 (2243745) | 2243745..2244290 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| IGI30_RS10845 (2244265) | 2244265..2246190 | + | 1926 | WP_130061267.1 | phage terminase large subunit family protein | - |
| IGI30_RS10850 (2246187) | 2246187..2246393 | + | 207 | WP_000198149.1 | gpW family protein | - |
| IGI30_RS10855 (2246390) | 2246390..2247991 | + | 1602 | WP_024236215.1 | phage portal protein | - |
| IGI30_RS10860 (2247972) | 2247972..2249291 | + | 1320 | WP_024236216.1 | S49 family peptidase | - |
| IGI30_RS10865 (2249301) | 2249301..2249633 | + | 333 | WP_049238490.1 | head decoration protein | - |
| IGI30_RS10870 (2249689) | 2249689..2250714 | + | 1026 | WP_193107654.1 | major capsid protein | - |
| IGI30_RS10875 (2250756) | 2250756..2251151 | + | 396 | WP_000158876.1 | DNA-packaging protein FI | - |
| IGI30_RS10880 (2251163) | 2251163..2251516 | + | 354 | WP_000785282.1 | head-tail joining protein | - |
| IGI30_RS10885 (2251528) | 2251528..2252106 | + | 579 | WP_000985123.1 | phage tail protein | - |
| IGI30_RS10890 (2252103) | 2252103..2252498 | + | 396 | WP_001535869.1 | phage minor tail U family protein | - |
| IGI30_RS10895 (2252506) | 2252506..2253246 | + | 741 | WP_001374825.1 | phage tail protein | - |
| IGI30_RS10900 (2253262) | 2253262..2253684 | + | 423 | WP_000479155.1 | phage minor tail protein G | - |
| IGI30_RS10905 (2253666) | 2253666..2254100 | + | 435 | WP_000459480.1 | phage tail assembly protein T | - |
| IGI30_RS10910 (2254093) | 2254093..2256672 | + | 2580 | WP_053295398.1 | phage tail tape measure protein | - |
| IGI30_RS10915 (2256669) | 2256669..2256998 | + | 330 | WP_000847331.1 | phage tail protein | - |
| IGI30_RS10920 (2256998) | 2256998..2257696 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| IGI30_RS10925 (2257702) | 2257702..2258445 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| IGI30_RS10930 (2258442) | 2258442..2259014 | + | 573 | WP_000847666.1 | tail assembly protein | - |
| IGI30_RS10935 (2259075) | 2259075..2262473 | + | 3399 | WP_130061268.1 | host specificity protein J | - |
| IGI30_RS10940 (2262540) | 2262540..2263139 | + | 600 | WP_001230352.1 | hypothetical protein | VF |
| IGI30_RS10945 (2263204) | 2263204..2266227 | + | 3024 | WP_072134162.1 | phage tail protein | - |
| IGI30_RS10950 (2266227) | 2266227..2266802 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| IGI30_RS10955 (2266900) | 2266900..2267490 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IGI30_RS10960 (2267807) | 2267807..2268040 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IGI30_RS10965 (2268109) | 2268109..2268222 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| IGI30_RS10970 (2268827) | 2268827..2270110 | + | 1284 | Protein_2153 | MHS family MFS transporter YdfJ | - |
| IGI30_RS10975 (2270199) | 2270199..2271659 | + | 1461 | WP_193107655.1 | mannitol dehydrogenase family protein | - |
| IGI30_RS10980 (2271695) | 2271695..2271898 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| IGI30_RS10985 (2272075) | 2272075..2272761 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| IGI30_RS10990 (2272850) | 2272850..2273596 | - | 747 | WP_000636568.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| IGI30_RS10995 (2273733) | 2273733..2275778 | + | 2046 | WP_001515364.1 | peptidyl-dipeptidase Dcp | - |
| IGI30_RS11000 (2275822) | 2275822..2276340 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| IGI30_RS11005 (2276619) | 2276619..2277011 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| IGI30_RS11010 (2277266) | 2277266..2278156 | + | 891 | WP_000592802.1 | diguanylate cyclase DgcZ | - |
| IGI30_RS11015 (2278271) | 2278271..2278375 | - | 105 | WP_211180496.1 | protein MgtT | - |
| IGI30_RS11020 (2278375) | 2278375..2278470 | - | 96 | WP_000901367.1 | protein MgtS | - |
| IGI30_RS11025 (2278597) | 2278597..2279784 | - | 1188 | WP_053295363.1 | efflux MFS transporter YdeE | - |
| IGI30_RS11030 (2279979) | 2279979..2280879 | + | 901 | Protein_2165 | O-acetylserine/cysteine exporter | - |
| IGI30_RS11035 (2280910) | 2280910..2281128 | - | 219 | WP_000803654.1 | multiple antibiotic resistance protein MarB | - |
| IGI30_RS11040 (2281160) | 2281160..2281543 | - | 384 | WP_000091199.1 | HTH-type transcriptional activator RhaS | VF |
| IGI30_RS11045 (2281564) | 2281564..2281998 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| IGI30_RS11050 (2282218) | 2282218..2282538 | + | 321 | WP_000273128.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IGI30_RS11055 (2282528) | 2282528..2282812 | + | 285 | WP_000268704.1 | helix-turn-helix transcriptional regulator | - |
| IGI30_RS11060 (2282933) | 2282933..2283598 | + | 666 | WP_000885035.1 | NAAT family transporter MarC | - |
| IGI30_RS11065 (2283623) | 2283623..2284813 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| IGI30_RS11070 (2284963) | 2284963..2286078 | - | 1116 | WP_193107656.1 | putative protein YneK | - |
| IGI30_RS11075 (2286156) | 2286156..2287037 | - | 882 | WP_000366501.1 | HTH-type transcriptional regulator HdfR | VF |
| IGI30_RS11080 (2287138) | 2287138..2288526 | + | 1389 | WP_193107657.1 | succinate-semialdehyde dehydrogenase | - |
| IGI30_RS11085 (2288590) | 2288590..2289516 | + | 927 | WP_000257409.1 | glutaminase B | - |
| IGI30_RS11090 (2289516) | 2289516..2289875 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| IGI30_RS11095 (2290014) | 2290014..2291432 | + | 1419 | WP_000558030.1 | diguanylate cyclase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|