MGE detailed information
MGE type: Genomic_island MGE length: 37249 bp
Accession: NZ_CP075474 Location: 2933096..2970344 Organism: Escherichia coli strain NT1N28 Replicon: chromosome
Accession: NZ_CP075474 Location: 2933096..2970344 Organism: Escherichia coli strain NT1N28 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI29_RS14795 (2929137) | 2929137..2929841 | + | 705 | WP_001241678.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| IGI29_RS14800 (2930126) | 2930126..2930344 | + | 219 | WP_001040187.1 | translation initiation factor IF-1 | - |
| IGI29_RS14810 (2930835) | 2930835..2931677 | - | 843 | WP_193119649.1 | DUF4942 domain-containing protein | - |
| IGI29_RS14815 (2931762) | 2931762..2931959 | - | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| IGI29_RS14820 (2931987) | 2931987..2932184 | - | 198 | Protein_2777 | DUF5983 family protein | - |
| IGI29_RS14825 (2932181) | 2932181..2932558 | - | 378 | WP_000854821.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | - |
| IGI29_RS14830 (2932648) | 2932648..2933016 | - | 369 | WP_024257643.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| IGI29_RS14835 (2933096) | 2933096..2933317 | - | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| IGI29_RS14840 (2933386) | 2933386..2933862 | - | 477 | WP_001186747.1 | RadC family protein | - |
| IGI29_RS14845 (2933877) | 2933877..2934362 | - | 486 | WP_000214317.1 | antirestriction protein | - |
| IGI29_RS14850 (2934453) | 2934453..2935271 | - | 819 | WP_001234702.1 | DUF932 domain-containing protein | - |
| IGI29_RS14855 (2935598) | 2935598..2938444 | - | 2847 | WP_193119650.1 | Ag43/Cah family autotransporter adhesin | - |
| IGI29_RS14860 (2938816) | 2938816..2939688 | - | 873 | WP_063120603.1 | GTPase family protein | - |
| IGI29_RS14865 (2939952) | 2939952..2941508 | + | 1557 | WP_193119651.1 | type I restriction-modification system subunit M | - |
| IGI29_RS14870 (2941505) | 2941505..2942710 | + | 1206 | WP_059239974.1 | restriction endonuclease subunit S | - |
| IGI29_RS14875 (2942832) | 2942832..2945948 | + | 3117 | WP_193119652.1 | HsdR family type I site-specific deoxyribonuclease | - |
| IGI29_RS14880 (2946109) | 2946109..2946375 | - | 267 | Protein_2789 | IS1 family transposase IS1S | Transposase |
| IGI29_RS14885 (2946381) | 2946381..2947372 | + | 992 | Protein_2790 | IS3 family transposase IS3 | Transposase |
| IGI29_RS14890 (2947413) | 2947413..2948770 | - | 1358 | Protein_2791 | GGDEF domain-containing protein | - |
| IGI29_RS14895 (2949423) | 2949423..2950120 | + | 698 | WP_225904509.1 | IS1 family transposase IS1A | Transposase |
| IGI29_RS14900 (2950145) | 2950145..2950360 | + | 216 | WP_000588737.1 | type I restriction-modification enzyme R subunit | - |
| IGI29_RS14905 (2950582) | 2950582..2950920 | + | 339 | WP_000117289.1 | hypothetical protein | - |
| IGI29_RS14910 (2951229) | 2951229..2952770 | + | 1542 | WP_069661456.1 | IS21 family transposase ISEc12 | Transposase |
| IGI29_RS14915 (2952785) | 2952785..2953531 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| IGI29_RS14920 (2954030) | 2954030..2955292 | + | 1263 | WP_096263470.1 | Prophage integrase IntS ; Integrase | Integrase |
| IGI29_RS14925 (2955478) | 2955478..2955693 | + | 216 | Protein_2798 | IS3 family transposase IS911 | Transposase |
| IGI29_RS14930 (2955803) | 2955803..2956180 | - | 378 | WP_053291281.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| IGI29_RS14935 (2956180) | 2956180..2956401 | - | 222 | WP_001603498.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IGI29_RS14940 (2956586) | 2956586..2957596 | - | 1011 | WP_193119655.1 | fimbrial protein | - |
| IGI29_RS14945 (2957607) | 2957607..2960093 | - | 2487 | WP_111970038.1 | Outer membrane usher protein YehB | VF |
| IGI29_RS14950 (2960111) | 2960111..2960791 | - | 681 | WP_053270475.1 | putative fimbrial chaperone YehC | VF |
| IGI29_RS14955 (2960847) | 2960847..2961410 | - | 564 | WP_193119654.1 | fimbrial protein YehD | - |
| IGI29_RS14965 (2962937) | 2962937..2963279 | - | 343 | Protein_2806 | DEAD/DEAH box helicase | - |
| IGI29_RS14970 (2963386) | 2963386..2963949 | - | 564 | WP_000282094.1 | inovirus-type Gp2 protein | - |
| IGI29_RS14975 (2965159) | 2965159..2966976 | - | 1818 | WP_225904510.1 | hypothetical protein | - |
| IGI29_RS14980 (2967083) | 2967083..2967331 | + | 249 | WP_001349431.1 | AlpA family transcriptional regulator | - |
| IGI29_RS14985 (2967347) | 2967347..2968912 | + | 1566 | WP_065304405.1 | DUF3987 domain-containing protein | - |
| IGI29_RS14990 (2969136) | 2969136..2970344 | - | 1209 | WP_000279862.1 | Prophage integrase IntA ; Integrase | Integrase |
| IGI29_RS14995 (2970978) | 2970978..2973254 | - | 2277 | WP_000934040.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | - |
| IGI29_RS15000 (2973285) | 2973285..2973605 | - | 321 | WP_000520781.1 | ATP-dependent Clp protease adapter ClpS | - |
| IGI29_RS15005 (2973704) | 2973704..2973778 | - | 75 | WP_001406719.1 | protein YljB | - |
| IGI29_RS15010 (2973928) | 2973928..2974152 | + | 225 | WP_000410785.1 | cold shock-like protein CspD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|