MGE detailed information
MGE type: IScluster/Tn MGE length: 3104 bp
Accession: NZ_CP075113 Location: 4193664..4196767 Organism: Salmonella enterica subsp. enterica serovar Dublin strain CFSAN059898 Replicon: chromosome
Accession: NZ_CP075113 Location: 4193664..4196767 Organism: Salmonella enterica subsp. enterica serovar Dublin strain CFSAN059898 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCO47_RS20490 (4188959) | 4188959..4189405 | - | 447 | WP_001077813.1 | SEF18 fimbria major subunit SefD | - |
| CCO47_RS20495 (4189402) | 4189402..4191840 | - | 2439 | WP_094912373.1 | SEF14/SEF18 fimbria usher protein SefC | - |
| CCO47_RS20500 (4191857) | 4191857..4192597 | - | 741 | WP_001575372.1 | SEF14/SEF18 fimbria chaperone SefB | - |
| CCO47_RS20505 (4192719) | 4192719..4193249 | - | 531 | WP_000909460.1 | SEF14 fimbria major subunit SefA | - |
| CCO47_RS20510 (4193572) | 4193572..4194705 | + | 1134 | Protein_4040 | IS3 family transposase | - |
| CCO47_RS20515 (4194737) | 4194737..4194877 | - | 141 | Protein_4041 | Arm DNA-binding domain-containing protein | - |
| CCO47_RS20520 (4195283) | 4195283..4195591 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| CCO47_RS20525 (4195594) | 4195594..4195833 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| CCO47_RS20530 (4195942) | 4195942..4196190 | - | 249 | WP_000168389.1 | ribbon-helix-helix domain-containing protein | - |
| CCO47_RS20535 (4196381) | 4196381..4196812 | - | 432 | Protein_4045 | IS630 family transposase ISEc33 | Transposase |
| CCO47_RS20545 (4197569) | 4197569..4198588 | + | 1020 | WP_000152558.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| CCO47_RS20550 (4198616) | 4198616..4199146 | - | 531 | WP_000896758.1 | gluconokinase | - |
| CCO47_RS20555 (4199363) | 4199363..4200394 | + | 1032 | WP_000453348.1 | L-idonate 5-dehydrogenase | - |
| CCO47_RS20560 (4200419) | 4200419..4201183 | + | 765 | WP_001061034.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|