MGE detailed information
MGE type: Prophage MGE length: 10784 bp
Accession: NZ_CP075113 Location: 304794..315577 Organism: Salmonella enterica subsp. enterica serovar Dublin strain CFSAN059898 Replicon: chromosome
Accession: NZ_CP075113 Location: 304794..315577 Organism: Salmonella enterica subsp. enterica serovar Dublin strain CFSAN059898 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCO47_RS01365 (300213) | 300213..301268 | + | 1056 | WP_001081707.1 | permease-like cell division protein FtsX | - |
| CCO47_RS01370 (301514) | 301514..302368 | + | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| CCO47_RS01375 (302690) | 302690..303793 | + | 1104 | WP_001839269.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| CCO47_RS01380 (303877) | 303877..304011 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| CCO47_RS01385 (303989) | 303989..304372 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| CCO47_RS01390 (304794) | 304794..305903 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| CCO47_RS01395 (305963) | 305963..306889 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| CCO47_RS01400 (306886) | 306886..308163 | + | 1278 | WP_000803764.1 | branched chain amino acid ABC transporter permease LivM | - |
| CCO47_RS01405 (308160) | 308160..308927 | + | 768 | WP_000082080.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CCO47_RS01410 (308929) | 308929..309642 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| CCO47_RS01415 (309773) | 309773..309994 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CCO47_RS01420 (309991) | 309991..310359 | + | 369 | WP_001575091.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| CCO47_RS01425 (310618) | 310618..311934 | + | 1317 | WP_000624752.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| CCO47_RS01430 (312039) | 312039..312926 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| CCO47_RS01435 (312923) | 312923..313768 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| CCO47_RS01440 (313770) | 313770..314840 | + | 1071 | WP_000907846.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CCO47_RS01445 (314837) | 314837..315577 | + | 741 | WP_000073545.1 | glycerophosphodiester phosphodiesterase | - |
| CCO47_RS01450 (315574) | 315574..315990 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| CCO47_RS01455 (316116) | 316116..317858 | + | 1743 | WP_000805110.1 | gamma-glutamyltransferase | - |
| CCO47_RS01460 (317903) | 317903..318937 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| CCO47_RS01465 (318934) | 318934..319905 | - | 972 | WP_001038949.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|