MGE detailed information
MGE type: Prophage MGE length: 61792 bp
Accession: NZ_CP075107 Location: 1901234..1963025 Organism: Salmonella enterica strain CFSAN060809 Replicon: chromosome
Accession: NZ_CP075107 Location: 1901234..1963025 Organism: Salmonella enterica strain CFSAN060809 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIC22_RS08990 () | 1896973..1897425 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| CIC22_RS08995 () | 1897455..1898195 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CIC22_RS09000 () | 1898232..1898753 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CIC22_RS09005 () | 1898755..1899354 | - | 600 | WP_000716750.1 | YebB family permuted papain-like enzyme | - |
| CIC22_RS09010 () | 1899563..1900255 | + | 693 | WP_023230996.1 | hypothetical protein | - |
| CIC22_RS09015 () | 1900614..1901225 | + | 612 | WP_000580333.1 | Holliday junction branch migration protein RuvA | - |
| CIC22_RS09020 () | 1901234..1902244 | + | 1011 | WP_000568508.1 | hypothetical protein | VF |
| CIC22_RS09025 () | 1902323..1903108 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| CIC22_RS09030 () | 1903105..1903860 | - | 756 | WP_000203018.1 | hypothetical protein | VF |
| CIC22_RS09035 () | 1903939..1904883 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CIC22_RS09040 () | 1904899..1906218 | + | 1320 | WP_001184030.1 | murein DD-endopeptidase MepM | - |
| CIC22_RS09045 () | 1906335..1907306 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| CIC22_RS09050 () | 1907379..1908821 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| CIC22_RS09055 () | 1908945..1909814 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| CIC22_RS09060 () | 1910156..1911631 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| CIC22_RS09065 () | 1911866..1913677 | + | 1812 | WP_052950270.1 | phosphogluconate dehydratase | - |
| CIC22_RS09070 () | 1913715..1914356 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CIC22_RS09075 () | 1914456..1915634 | - | 1179 | WP_000173436.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CIC22_RS09080 () | 1915765..1916055 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| CIC22_RS09085 () | 1916123..1916476 | + | 354 | WP_001042123.1 | protein YebF | - |
| CIC22_RS09090 () | 1916570..1917229 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| CIC22_RS09095 () | 1917442..1919493 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| CIC22_RS09100 () | 1919530..1920228 | - | 699 | WP_000944280.1 | exodeoxyribonuclease X | - |
| CIC22_RS09105 () | 1920252..1920908 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| CIC22_RS09110 () | 1921016..1921246 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| CIC22_RS09115 () | 1921384..1921758 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| CIC22_RS09120 () | 1921759..1922634 | + | 876 | WP_000979695.1 | copper homeostasis membrane protein CopD | - |
| CIC22_RS09125 () | 1922651..1923004 | + | 354 | WP_000722363.1 | YebY family protein | - |
| - | 1923107..1923250 | - | 144 | - | - | Antitoxin Detail |
| - | 1923145..1923248 | + | 104 | - | - | Toxin Detail |
| CIC22_RS09130 () | 1923378..1924457 | - | 1080 | WP_220541863.1 | hypothetical protein ; Integrase | Integrase |
| CIC22_RS09135 () | 1924490..1925638 | - | 1149 | Protein_1788 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| CIC22_RS09140 () | 1925630..1925878 | + | 249 | Protein_1789 | glycoside hydrolase family 19 protein | - |
| CIC22_RS09145 () | 1925875..1926407 | + | 533 | Protein_1790 | DUF2514 domain-containing protein | - |
| CIC22_RS09150 () | 1926664..1926831 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| CIC22_RS09155 () | 1927134..1927394 | + | 261 | Protein_1792 | DUF1441 family protein | - |
| CIC22_RS21425 () | 1927396..1927611 | + | 216 | Protein_1793 | shikimate transporter | - |
| CIC22_RS09160 () | 1927621..1927908 | + | 288 | Protein_1794 | macro domain-containing protein | - |
| CIC22_RS09165 () | 1927921..1928441 | + | 521 | Protein_1795 | tail fiber assembly protein | - |
| CIC22_RS09170 () | 1928538..1928738 | - | 201 | WP_031615635.1 | PagK family vesicle-borne virulence factor | - |
| CIC22_RS21430 () | 1929128..1929308 | - | 181 | Protein_1797 | IS3 family transposase | - |
| CIC22_RS09175 () | 1929299..1929400 | + | 102 | Protein_1798 | arsenic transporter | - |
| CIC22_RS21435 () | 1930022..1930254 | + | 233 | Protein_1799 | helix-turn-helix domain-containing protein | - |
| CIC22_RS09185 () | 1930581..1931195 | - | 615 | WP_000848064.1 | disulfide bond formation protein B | - |
| CIC22_RS09190 () | 1931205..1931363 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| CIC22_RS09195 () | 1931496..1932410 | - | 915 | WP_046380654.1 | DMT family transporter | - |
| CIC22_RS09200 () | 1933705..1934127 | - | 423 | Protein_1803 | hypothetical protein ; Integrase | Integrase |
| CIC22_RS09205 () | 1934197..1935384 | + | 1188 | Protein_1804 | IS256 family transposase IS285 | Transposase |
| CIC22_RS09210 () | 1935530..1935670 | - | 141 | WP_001604859.1 | hypothetical protein | - |
| CIC22_RS09215 () | 1935836..1936105 | - | 270 | WP_077906414.1 | hypothetical protein | - |
| CIC22_RS09220 () | 1936145..1936345 | + | 201 | WP_000007801.1 | hypothetical protein | - |
| CIC22_RS09225 () | 1936474..1936893 | + | 420 | WP_000354406.1 | GNAT family N-acetyltransferase | - |
| CIC22_RS09230 () | 1937129..1938220 | - | 1092 | Protein_1809 | lipopolysaccharide N-acetylglucosaminyltransferase | - |
| CIC22_RS09235 () | 1939120..1939858 | - | 739 | Protein_1810 | hypothetical protein ; Integrase | Integrase |
| CIC22_RS09240 () | 1939977..1940990 | - | 1014 | WP_023168584.1 | acyltransferase family protein | - |
| CIC22_RS09245 () | 1941687..1941890 | - | 204 | WP_000774038.1 | hypothetical protein | VF |
| CIC22_RS09250 () | 1942074..1942319 | - | 246 | WP_001051755.1 | hypothetical protein | - |
| CIC22_RS09255 () | 1943518..1943691 | + | 174 | WP_079838199.1 | CZB domain-containing protein | - |
| CIC22_RS09260 () | 1943956..1944432 | - | 477 | WP_000102094.1 | hypothetical protein | - |
| CIC22_RS09265 () | 1944760..1945155 | - | 396 | WP_000422883.1 | DUF1398 domain-containing protein | - |
| CIC22_RS09270 () | 1945839..1946561 | + | 723 | WP_000182069.1 | hypothetical protein | VF |
| CIC22_RS09275 () | 1946846..1947010 | + | 165 | WP_001134850.1 | hypothetical protein | - |
| CIC22_RS09280 () | 1947235..1947885 | + | 651 | WP_000986166.1 | protein-serine/threonine phosphatase | - |
| CIC22_RS09285 () | 1947904..1948095 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| CIC22_RS09290 () | 1948206..1948442 | - | 237 | WP_024131167.1 | YebV family protein | - |
| CIC22_RS09295 () | 1948559..1949998 | - | 1440 | WP_001530936.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CIC22_RS09300 () | 1950076..1952709 | - | 2634 | WP_001530909.1 | hypothetical protein | VF |
| CIC22_RS09305 () | 1952678..1953961 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| CIC22_RS09310 () | 1954090..1954587 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| CIC22_RS09315 () | 1954685..1955371 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| CIC22_RS09320 () | 1955391..1957439 | + | 2049 | WP_001091241.1 | carboxy terminal-processing peptidase | - |
| CIC22_RS09325 () | 1957632..1958513 | + | 882 | WP_000984498.1 | protease HtpX | - |
| CIC22_RS09330 () | 1958561..1959934 | - | 1374 | WP_000416144.1 | MFS transporter | - |
| CIC22_RS09335 () | 1960110..1960901 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| CIC22_RS09340 () | 1961113..1961352 | - | 240 | WP_001236778.1 | invasion protein YobH | - |
| CIC22_RS09345 () | 1961510..1961653 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| CIC22_RS09350 () | 1961724..1962011 | + | 288 | WP_001000660.1 | YebO family protein | - |
| CIC22_RS09355 () | 1962660..1962803 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| CIC22_RS09360 () | 1962816..1963025 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CIC22_RS09365 () | 1963245..1964990 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| CIC22_RS09370 () | 1965056..1965865 | + | 810 | WP_000010916.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| CIC22_RS09375 () | 1965862..1966428 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| CIC22_RS09380 () | 1966838..1967296 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|