MGE detailed information
MGE type: Prophage MGE length: 33357 bp
Accession: NZ_CP074572 Location: 2523086..2556442 Organism: Shewanella dokdonensis strain DSM 23626 Replicon: chromosome
Accession: NZ_CP074572 Location: 2523086..2556442 Organism: Shewanella dokdonensis strain DSM 23626 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KHX94_RS12050 (KHX94_12045) | 2518224..2518823 | + | 600 | WP_213680821.1 | ATP-binding protein | - |
| KHX94_RS12055 (KHX94_12050) | 2518742..2520220 | + | 1479 | WP_213680822.1 | hypothetical protein | - |
| KHX94_RS12060 (KHX94_12055) | 2520383..2520955 | + | 573 | WP_213680823.1 | hypothetical protein | - |
| KHX94_RS12065 (KHX94_12060) | 2521015..2521671 | + | 657 | WP_213680824.1 | DUF4145 domain-containing protein | - |
| KHX94_RS12070 (KHX94_12065) | 2521732..2522130 | + | 399 | WP_213680825.1 | hypothetical protein | - |
| KHX94_RS12075 (KHX94_12070) | 2522357..2523058 | + | 702 | WP_213680826.1 | HNH endonuclease family protein | - |
| KHX94_RS12080 (KHX94_12075) | 2523086..2524036 | - | 951 | WP_213680827.1 | helix-turn-helix domain-containing protein | - |
| KHX94_RS12085 (KHX94_12080) | 2524117..2524362 | + | 246 | WP_244859131.1 | regulatory phage cox family protein | - |
| KHX94_RS12090 (KHX94_12085) | 2524415..2524945 | + | 531 | WP_244859132.1 | phage regulatory CII family protein | - |
| KHX94_RS12095 (KHX94_12090) | 2524956..2525228 | + | 273 | WP_213680829.1 | pyocin activator PrtN family protein | - |
| KHX94_RS12100 (KHX94_12095) | 2525225..2525671 | + | 447 | WP_213680830.1 | hypothetical protein | - |
| KHX94_RS12105 (KHX94_12100) | 2525755..2525985 | + | 231 | WP_213680831.1 | hypothetical protein | - |
| KHX94_RS12110 (KHX94_12105) | 2526000..2526293 | + | 294 | WP_213680832.1 | hypothetical protein | - |
| KHX94_RS12115 (KHX94_12110) | 2526290..2526517 | + | 228 | WP_213680833.1 | hypothetical protein | - |
| KHX94_RS12120 (KHX94_12115) | 2526514..2527002 | + | 489 | WP_213680834.1 | hypothetical protein | - |
| KHX94_RS12125 (KHX94_12120) | 2527081..2527272 | + | 192 | WP_213680835.1 | hypothetical protein | - |
| KHX94_RS21165 (KHX94_12125) | 2527596..2528294 | + | 699 | WP_280529658.1 | replication endonuclease | - |
| KHX94_RS20535 (KHX94_12130) | 2528231..2529526 | + | 1296 | Protein_2418 | replication endonuclease | - |
| KHX94_RS12140 (KHX94_12135) | 2529540..2529764 | + | 225 | WP_213680838.1 | hypothetical protein | - |
| KHX94_RS12145 (KHX94_12140) | 2529761..2530054 | + | 294 | WP_213680839.1 | hypothetical protein | - |
| KHX94_RS12150 (KHX94_12145) | 2530051..2530308 | + | 258 | WP_213680840.1 | hypothetical protein | - |
| KHX94_RS12155 (KHX94_12150) | 2530688..2530978 | - | 291 | WP_213680841.1 | helix-turn-helix transcriptional regulator | - |
| KHX94_RS12160 (KHX94_12155) | 2531368..2531547 | + | 180 | WP_213680842.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| KHX94_RS12165 (KHX94_12160) | 2531600..2532031 | + | 432 | WP_213680843.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| KHX94_RS12170 (KHX94_12165) | 2532028..2532282 | - | 255 | WP_280529659.1 | ogr/Delta-like zinc finger family protein | - |
| KHX94_RS12175 (KHX94_12170) | 2532412..2533251 | - | 840 | WP_244859134.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| KHX94_RS12180 (KHX94_12175) | 2533457..2533900 | - | 444 | WP_213680845.1 | phage tail protein | - |
| KHX94_RS12185 (KHX94_12180) | 2533906..2536527 | - | 2622 | WP_213680846.1 | phage tail tape measure protein | - |
| KHX94_RS12190 (KHX94_12185) | 2536520..2536657 | - | 138 | WP_213680847.1 | GpE family phage tail protein | - |
| KHX94_RS12195 (KHX94_12190) | 2536662..2536958 | - | 297 | WP_213680848.1 | phage tail assembly protein | - |
| KHX94_RS12200 (KHX94_12195) | 2537023..2537541 | - | 519 | WP_213680849.1 | phage major tail tube protein | - |
| KHX94_RS12205 (KHX94_12200) | 2537551..2538722 | - | 1172 | Protein_2432 | phage tail sheath protein | - |
| KHX94_RS12210 (KHX94_12205) | 2538834..2539604 | - | 771 | WP_213680850.1 | hypothetical protein | - |
| KHX94_RS12215 (KHX94_12210) | 2539673..2540926 | - | 1254 | WP_213680851.1 | hypothetical protein | - |
| KHX94_RS12220 (KHX94_12215) | 2540923..2541453 | - | 531 | WP_213680852.1 | phage tail protein I | - |
| KHX94_RS12225 (KHX94_12220) | 2541450..2542442 | - | 993 | WP_244859135.1 | baseplate J/gp47 family protein | - |
| KHX94_RS12230 (KHX94_12225) | 2542483..2542812 | - | 330 | WP_213680854.1 | GPW/gp25 family protein | - |
| KHX94_RS12235 (KHX94_12230) | 2542809..2543417 | - | 609 | WP_213680855.1 | phage baseplate assembly protein V | - |
| KHX94_RS12240 (KHX94_12235) | 2543568..2543903 | + | 336 | WP_213680856.1 | hypothetical protein | - |
| KHX94_RS12245 (KHX94_12240) | 2544004..2544288 | - | 285 | WP_213680857.1 | hypothetical protein | - |
| KHX94_RS12250 (KHX94_12245) | 2544461..2544661 | - | 201 | WP_213680858.1 | phage virion morphogenesis protein | - |
| KHX94_RS12255 (KHX94_12250) | 2544651..2545220 | - | 570 | WP_213680859.1 | hypothetical protein | - |
| KHX94_RS12260 (KHX94_12255) | 2545374..2545823 | - | 450 | WP_213680860.1 | phage virion morphogenesis protein | - |
| KHX94_RS12265 (KHX94_12260) | 2545805..2546272 | - | 468 | WP_213680861.1 | phage tail protein | - |
| KHX94_RS12270 (KHX94_12265) | 2546357..2546797 | - | 441 | WP_213680862.1 | Rz-like lysis system protein LysB | - |
| KHX94_RS12275 (KHX94_12270) | 2546790..2547599 | - | 810 | WP_213680863.1 | N-acetylmuramidase family protein | - |
| KHX94_RS12280 (KHX94_12275) | 2547596..2547907 | - | 312 | WP_213680864.1 | phage holin family protein | - |
| KHX94_RS12285 (KHX94_12280) | 2547904..2548275 | - | 372 | WP_213680865.1 | putative holin | - |
| KHX94_RS12290 (KHX94_12285) | 2548278..2548490 | - | 213 | WP_244859448.1 | tail protein X | - |
| KHX94_RS12295 (KHX94_12290) | 2548490..2548948 | - | 459 | WP_213680866.1 | head completion/stabilization protein | - |
| KHX94_RS12300 (KHX94_12295) | 2549050..2549733 | - | 684 | WP_213680867.1 | phage terminase small subunit | - |
| KHX94_RS12305 (KHX94_12300) | 2549736..2550764 | - | 1029 | WP_244859136.1 | phage major capsid protein, P2 family | - |
| KHX94_RS20540 | 2550758..2551018 | - | 261 | WP_244859137.1 | GPO family capsid scaffolding protein | - |
| KHX94_RS20545 | 2551015..2551185 | - | 171 | WP_244859449.1 | GPO family capsid scaffolding protein | - |
| KHX94_RS20550 | 2551104..2551577 | - | 474 | WP_244859138.1 | GPO family capsid scaffolding protein | - |
| KHX94_RS12315 (KHX94_12310) | 2551755..2553511 | + | 1757 | Protein_2456 | terminase ATPase subunit family protein | - |
| KHX94_RS12320 (KHX94_12315) | 2553511..2554524 | + | 1014 | WP_213680868.1 | phage portal protein | - |
| KHX94_RS12325 (KHX94_12320) | 2555384..2556442 | - | 1059 | WP_213680869.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KHX94_RS12330 (KHX94_12325) | 2556619..2557553 | + | 935 | Protein_2459 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| KHX94_RS12335 (KHX94_12330) | 2557765..2558073 | + | 309 | WP_213680870.1 | hypothetical protein | - |
| KHX94_RS12345 (KHX94_12340) | 2558312..2558671 | + | 360 | WP_213680872.1 | hypothetical protein | - |
| KHX94_RS12350 (KHX94_12345) | 2558730..2559467 | - | 738 | WP_213680873.1 | enoyl-CoA hydratase-related protein | - |
| KHX94_RS12355 (KHX94_12350) | 2559633..2560604 | + | 972 | WP_213680874.1 | DUF2333 family protein | - |
| KHX94_RS12360 (KHX94_12355) | 2560608..2561345 | + | 738 | WP_213680875.1 | TIGR04219 family outer membrane beta-barrel protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|