MGE detailed information
MGE type: Genomic_island MGE length: 56692 bp
Accession: NZ_CP074407 Location: 242147..298838 Organism: Escherichia coli strain GDAR2-2 Replicon: chromosome
Accession: NZ_CP074407 Location: 242147..298838 Organism: Escherichia coli strain GDAR2-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KHW16_RS01040 (237907) | 237907..238938 | - | 1032 | WP_000416159.1 | LacI family DNA-binding transcriptional regulator | - |
| KHW16_RS01045 (239209) | 239209..239652 | + | 444 | WP_000916811.1 | PTS sugar transporter subunit IIA | - |
| KHW16_RS01050 (239668) | 239668..239955 | + | 288 | WP_000705927.1 | PTS sugar transporter subunit IIB | - |
| KHW16_RS01055 (239968) | 239968..241224 | + | 1257 | WP_000345349.1 | PTS ascorbate transporter subunit IIC | - |
| KHW16_RS01060 (241471) | 241471..241725 | - | 255 | WP_001327567.1 | transposase | - |
| KHW16_RS01065 (242147) | 242147..243160 | - | 1014 | WP_000107474.1 | aldose 1-epimerase family protein | - |
| KHW16_RS01070 (243172) | 243172..244488 | - | 1317 | WP_000998353.1 | L-fucose:H+ symporter permease | - |
| KHW16_RS01075 (244516) | 244516..245436 | - | 921 | WP_000350265.1 | ribokinase | - |
| KHW16_RS01080 (245742) | 245742..246524 | + | 783 | WP_001305338.1 | DeoR family transcriptional regulator | - |
| KHW16_RS01085 (246526) | 246526..246752 | - | 227 | Protein_214 | acetolactate synthase small subunit | - |
| KHW16_RS01090 (247351) | 247351..247545 | + | 195 | WP_001305341.1 | hypothetical protein | - |
| KHW16_RS01095 (248063) | 248063..248521 | + | 459 | WP_001529506.1 | hypothetical protein | - |
| KHW16_RS01100 (248957) | 248957..249292 | + | 336 | WP_224491499.1 | CPBP family intramembrane metalloprotease | - |
| KHW16_RS01105 (249612) | 249612..250577 | - | 966 | WP_001305344.1 | hypothetical protein | - |
| KHW16_RS01110 (250685) | 250685..252991 | - | 2307 | WP_238557809.1 | exopolygalacturonate lyase | - |
| KHW16_RS01115 (252921) | 252921..254435 | - | 1515 | WP_000134160.1 | MFS transporter | - |
| KHW16_RS01120 (254801) | 254801..255124 | - | 324 | WP_000497518.1 | cupin domain-containing protein | - |
| KHW16_RS01125 (255179) | 255179..255979 | - | 801 | WP_000345753.1 | hypothetical protein | VF |
| KHW16_RS01130 (256009) | 256009..257181 | - | 1173 | WP_001051732.1 | oligogalacturonate lyase family protein | - |
| KHW16_RS01135 (257432) | 257432..258070 | + | 639 | WP_000684812.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| KHW16_RS01140 (258389) | 258389..258586 | - | 198 | WP_001305346.1 | AlpA family transcriptional regulator | - |
| KHW16_RS01145 (258654) | 258654..258924 | - | 271 | Protein_226 | hypothetical protein | - |
| KHW16_RS01150 (258974) | 258974..259540 | - | 567 | WP_000287897.1 | inovirus-type Gp2 protein | - |
| KHW16_RS01155 (259568) | 259568..259765 | - | 198 | WP_001305349.1 | hypothetical protein | - |
| KHW16_RS01160 (260012) | 260012..260194 | - | 183 | Protein_229 | putative zinc ribbon protein | - |
| KHW16_RS01165 (260273) | 260273..261450 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| KHW16_RS01170 (261460) | 261460..261699 | - | 240 | Protein_231 | zinc-ribbon domain-containing protein | - |
| KHW16_RS01175 (261696) | 261696..262079 | - | 384 | WP_000270955.1 | putative zinc ribbon protein | - |
| KHW16_RS01180 (262451) | 262451..263050 | - | 600 | WP_000860849.1 | inovirus-type Gp2 protein | - |
| KHW16_RS01185 (263282) | 263282..263431 | - | 150 | WP_072146520.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| KHW16_RS01190 (264497) | 264497..265288 | + | 792 | WP_001367564.1 | hypothetical protein | - |
| KHW16_RS01195 (265672) | 265672..265878 | + | 207 | WP_001305352.1 | AlpA family transcriptional regulator | - |
| KHW16_RS01200 (265966) | 265966..266574 | + | 609 | WP_000782654.1 | hypothetical protein | - |
| KHW16_RS24340 (267037) | 267037..267189 | + | 153 | Protein_238 | ATP-binding protein | - |
| KHW16_RS01210 (268368) | 268368..268582 | + | 215 | Protein_239 | hypothetical protein | - |
| KHW16_RS01215 (269107) | 269107..269364 | - | 258 | WP_001163787.1 | hypothetical protein | - |
| KHW16_RS01220 (269418) | 269418..270185 | - | 768 | WP_000016205.1 | hypothetical protein | VF |
| KHW16_RS01225 (270182) | 270182..271240 | - | 1059 | WP_000217077.1 | hypothetical protein | VF |
| KHW16_RS01230 (271259) | 271259..272248 | - | 990 | WP_000778018.1 | ABC transporter substrate-binding protein | - |
| KHW16_RS01235 (272259) | 272259..274424 | - | 2166 | WP_000856947.1 | TonB-dependent receptor | - |
| KHW16_RS01240 (274907) | 274907..275716 | + | 810 | WP_001305362.1 | hypothetical protein | - |
| KHW16_RS01245 (275834) | 275834..276571 | - | 738 | WP_000019301.1 | hypothetical protein | - |
| KHW16_RS01250 (276799) | 276799..277319 | - | 521 | Protein_247 | tyrosine-type recombinase/integrase | - |
| KHW16_RS01255 (277718) | 277718..278818 | + | 1101 | WP_001313577.1 | hypothetical protein | - |
| KHW16_RS01260 (279040) | 279040..279474 | + | 435 | WP_001069809.1 | hypothetical protein | - |
| KHW16_RS01265 (279692) | 279692..282088 | + | 2397 | WP_000544741.1 | dynamin family protein | - |
| KHW16_RS01270 (282085) | 282085..282990 | + | 906 | WP_000203555.1 | diguanylate cyclase regulator RdcB family protein | - |
| KHW16_RS01275 (282987) | 282987..284057 | + | 1071 | WP_000102646.1 | hypothetical protein | VF |
| KHW16_RS01280 (284186) | 284186..284653 | + | 468 | WP_001239911.1 | hypothetical protein | - |
| KHW16_RS01285 (284709) | 284709..285338 | + | 630 | WP_000680181.1 | hypothetical protein | - |
| KHW16_RS01290 (285773) | 285773..286225 | + | 453 | WP_000682723.1 | hypothetical protein | - |
| KHW16_RS01295 (286343) | 286343..286576 | + | 234 | WP_001213776.1 | DUF905 family protein | - |
| KHW16_RS01300 (286676) | 286676..287497 | + | 822 | WP_001234359.1 | DUF932 domain-containing protein | - |
| KHW16_RS01305 (287497) | 287497..287742 | + | 246 | WP_001164966.1 | hypothetical protein | - |
| KHW16_RS01310 (287836) | 287836..288309 | + | 474 | WP_001313575.1 | antirestriction protein | - |
| KHW16_RS01315 (288325) | 288325..288801 | + | 477 | WP_001313574.1 | RadC family protein | - |
| KHW16_RS01320 (288864) | 288864..289085 | + | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| KHW16_RS01325 (289104) | 289104..289748 | + | 645 | WP_000086759.1 | hypothetical protein | - |
| KHW16_RS01330 (289798) | 289798..290172 | + | 375 | WP_001285481.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KHW16_RS01335 (290219) | 290219..290596 | + | 378 | WP_000854730.1 | TA system toxin CbtA family protein | Toxin Detail |
| KHW16_RS01340 (290593) | 290593..291085 | + | 493 | Protein_265 | DUF5983 family protein | - |
| KHW16_RS01345 (291164) | 291164..292152 | - | 989 | Protein_266 | IS630 family transposase IS630 | Transposase |
| KHW16_RS01350 (292300) | 292300..293893 | - | 1594 | Protein_267 | IS66 family transposase ISEc47 | Transposase |
| KHW16_RS01355 (293924) | 293924..294274 | - | 351 | WP_000624707.1 | IS66 family transposase IS682 | Transposase |
| KHW16_RS01360 (294271) | 294271..294562 | - | 292 | Protein_269 | IS66 family transposase ISEc43 | Transposase |
| KHW16_RS01365 (294604) | 294604..294798 | + | 195 | WP_001313570.1 | DUF957 domain-containing protein | - |
| KHW16_RS01370 (294880) | 294880..295737 | + | 858 | Protein_271 | DUF4942 domain-containing protein | - |
| KHW16_RS01380 (296067) | 296067..296798 | - | 732 | WP_001308374.1 | DNA polymerase III subunit epsilon | - |
| KHW16_RS01385 (296863) | 296863..297330 | + | 468 | WP_000917878.1 | ribonuclease HI | - |
| KHW16_RS01390 (297327) | 297327..298049 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| KHW16_RS01395 (298083) | 298083..298838 | + | 756 | WP_001052735.1 | hydroxyacylglutathione hydrolase | - |
| KHW16_RS01400 (298910) | 298910..300268 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| KHW16_RS01405 (300317) | 300317..301087 | - | 771 | WP_000211716.1 | class I SAM-dependent methyltransferase | - |
| KHW16_RS01410 (301165) | 301165..301965 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| KHW16_RS01415 (302206) | 302206..303120 | + | 915 | WP_033560946.1 | DNA-binding transcriptional regulator YafC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|