MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 112267 bp
Accession: NZ_CP074008 Location: 1..112267 Organism: Escherichia coli strain PD4 Replicon: plasmid pYLPD4a
Accession: NZ_CP074008 Location: 1..112267 Organism: Escherichia coli strain PD4 Replicon: plasmid pYLPD4a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU74_RS23090 (KFU74_22935) | 1..1056 | + | 1056 | WP_025670526.1 | replication protein RepA | - |
| KFU74_RS23095 (KFU74_22940) | 1666..1836 | - | 171 | WP_096178431.1 | hypothetical protein | - |
| KFU74_RS23100 (KFU74_22945) | 1886..2583 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| KFU74_RS23105 (KFU74_22950) | 2816..3367 | + | 552 | WP_257188402.1 | fimbrial protein YehD | - |
| KFU74_RS23110 (KFU74_22955) | 3421..4101 | + | 681 | WP_025670919.1 | putative fimbrial chaperone YehC | VF |
| KFU74_RS23115 (KFU74_22960) | 4229..6715 | + | 2487 | WP_257233050.1 | Outer membrane usher protein YehB | VF |
| KFU74_RS23120 (KFU74_22965) | 6727..7740 | + | 1014 | WP_257188403.1 | fimbrial protein | - |
| KFU74_RS23125 (KFU74_22970) | 8064..9292 | + | 1229 | WP_105919137.1 | IS3 family transposase IS2 | Transposase |
| KFU74_RS23130 (KFU74_22975) | 9304..10017 | + | 714 | WP_025670475.1 | hypothetical protein | - |
| KFU74_RS23135 (KFU74_22980) | 10167..10340 | - | 174 | Protein_9 | IS3 family transposase | - |
| KFU74_RS23140 (KFU74_22985) | 10498..12837 | - | 2340 | WP_240778277.1 | LAGLIDADG family homing endonuclease | - |
| KFU74_RS23145 (KFU74_22990) | 12840..13106 | - | 267 | WP_000920226.1 | hypothetical protein | - |
| KFU74_RS23150 (KFU74_22995) | 13106..14050 | - | 945 | WP_023135728.1 | 5'-3' exonuclease H3TH domain-containing protein | - |
| KFU74_RS23155 (KFU74_23000) | 14111..15127 | - | 1017 | WP_124047400.1 | regulator | - |
| KFU74_RS23160 (KFU74_23005) | 15247..15678 | - | 432 | WP_257188404.1 | hypothetical protein | - |
| KFU74_RS23165 (KFU74_23010) | 16110..16688 | + | 579 | WP_257188405.1 | DNA-binding protein | - |
| KFU74_RS23170 (KFU74_23015) | 16717..20235 | - | 3519 | WP_257188406.1 | DNA polymerase III subunit alpha | - |
| KFU74_RS23175 (KFU74_23020) | 20416..21651 | - | 1236 | WP_001717302.1 | AAA family ATPase | - |
| KFU74_RS23180 (KFU74_23025) | 21747..23855 | - | 2109 | WP_257188407.1 | cobalamin biosynthesis protein CobT | - |
| KFU74_RS23185 (KFU74_23030) | 23954..24166 | - | 213 | WP_012640719.1 | hypothetical protein | - |
| KFU74_RS23190 (KFU74_23035) | 24418..24804 | + | 387 | WP_001282576.1 | transcriptional regulator | - |
| KFU74_RS23195 (KFU74_23040) | 24799..25902 | - | 1104 | WP_000797845.1 | site-specific integrase | - |
| KFU74_RS23200 (KFU74_23045) | 26113..26358 | - | 246 | WP_000156433.1 | GrxA family glutaredoxin | - |
| KFU74_RS23205 (KFU74_23050) | 26355..26705 | - | 351 | WP_077127604.1 | Gp49 family protein | - |
| KFU74_RS23225 (KFU74_23070) | 27953..28243 | - | 291 | WP_000067985.1 | hypothetical protein | - |
| KFU74_RS23230 | 28389..28604 | - | 216 | WP_000636535.1 | hypothetical protein | - |
| KFU74_RS23235 (KFU74_23075) | 28601..29923 | - | 1323 | WP_257188408.1 | DNA ligase | - |
| KFU74_RS23240 (KFU74_23080) | 29920..30402 | - | 483 | WP_106361768.1 | hypothetical protein | - |
| KFU74_RS23245 (KFU74_23085) | 30458..31240 | - | 783 | WP_257188409.1 | hypothetical protein | - |
| KFU74_RS23250 (KFU74_23090) | 31316..32431 | - | 1116 | WP_025670482.1 | hypothetical protein | - |
| KFU74_RS23255 (KFU74_23095) | 32579..33919 | - | 1341 | WP_257188410.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| KFU74_RS23260 (KFU74_23100) | 33963..34703 | - | 741 | WP_257188411.1 | hypothetical protein | - |
| KFU74_RS23265 (KFU74_23105) | 34986..35753 | + | 768 | WP_000342417.1 | hypothetical protein | - |
| KFU74_RS23270 (KFU74_23110) | 35806..36159 | - | 354 | WP_160378290.1 | hypothetical protein | - |
| KFU74_RS23275 (KFU74_23115) | 36165..36833 | - | 669 | WP_000161228.1 | division plane positioning ATPase MipZ | - |
| KFU74_RS23280 (KFU74_23120) | 37152..37421 | + | 270 | WP_001351987.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| KFU74_RS23285 (KFU74_23125) | 37429..37950 | + | 522 | WP_000072677.1 | GNAT family N-acetyltransferase | Toxin Detail |
| KFU74_RS23290 (KFU74_23130) | 38119..38370 | - | 252 | WP_257188412.1 | hypothetical protein | - |
| KFU74_RS23295 (KFU74_23135) | 38372..39064 | - | 693 | WP_032084069.1 | membrane protein | - |
| KFU74_RS23300 (KFU74_23140) | 39078..39401 | - | 324 | WP_257188413.1 | hypothetical protein | - |
| KFU74_RS23305 (KFU74_23145) | 39476..40264 | - | 789 | WP_193131347.1 | receptor-recognizing protein | - |
| KFU74_RS23310 | 40331..44908 | - | 4578 | WP_257233056.1 | tail fiber domain-containing protein | - |
| KFU74_RS23315 (KFU74_23170) | 45278..50005 | - | 4728 | WP_257188415.1 | phage tail protein | - |
| KFU74_RS23320 (KFU74_23175) | 50023..50616 | - | 594 | WP_089632746.1 | tail assembly protein | - |
| KFU74_RS23325 (KFU74_23180) | 50604..51401 | - | 798 | WP_000526938.1 | C40 family peptidase | - |
| KFU74_RS23330 (KFU74_23185) | 51394..52092 | - | 699 | WP_000511445.1 | phage minor tail protein L | - |
| KFU74_RS23335 (KFU74_23190) | 52175..52510 | - | 336 | WP_000442112.1 | phage tail protein | - |
| KFU74_RS23340 (KFU74_23195) | 52553..57097 | - | 4545 | WP_257233055.1 | tape measure protein | - |
| KFU74_RS23345 (KFU74_23200) | 57105..57329 | - | 225 | WP_000952686.1 | hypothetical protein | - |
| KFU74_RS23350 (KFU74_23205) | 57455..57772 | - | 318 | WP_025670489.1 | hypothetical protein | - |
| KFU74_RS23355 (KFU74_23210) | 57834..58580 | - | 747 | WP_000072375.1 | Ig domain-containing protein | - |
| KFU74_RS23360 (KFU74_23215) | 58655..59038 | - | 384 | WP_000469440.1 | minor capsid protein | - |
| KFU74_RS23365 (KFU74_23220) | 59040..59513 | - | 474 | WP_000523628.1 | hypothetical protein | - |
| KFU74_RS23370 (KFU74_23225) | 59504..59848 | - | 345 | WP_001027663.1 | hypothetical protein | - |
| KFU74_RS23375 (KFU74_23230) | 59928..60761 | - | 834 | WP_000057117.1 | hypothetical protein | - |
| KFU74_RS23380 (KFU74_23235) | 60761..61195 | - | 435 | WP_000801186.1 | hypothetical protein | - |
| KFU74_RS23385 (KFU74_23240) | 61240..62160 | - | 921 | WP_257233034.1 | Ig-like domain-containing protein | - |
| KFU74_RS23390 (KFU74_23245) | 62234..63109 | - | 876 | WP_257233035.1 | phage major capsid protein | - |
| KFU74_RS23395 (KFU74_23250) | 63135..64022 | - | 888 | WP_257233036.1 | DivIVA domain-containing protein | - |
| KFU74_RS23400 (KFU74_23255) | 64044..65618 | - | 1575 | WP_000422363.1 | phage portal protein | - |
| KFU74_RS23405 (KFU74_23260) | 65645..66901 | - | 1257 | WP_001007299.1 | phage terminase large subunit | - |
| KFU74_RS23410 (KFU74_23265) | 66901..67533 | - | 633 | WP_025670490.1 | hypothetical protein | - |
| KFU74_RS23415 (KFU74_23270) | 67730..67996 | - | 267 | WP_000176292.1 | hypothetical protein | - |
| KFU74_RS23420 (KFU74_23275) | 68006..68896 | - | 891 | WP_001351974.1 | hypothetical protein | - |
| KFU74_RS23425 (KFU74_23280) | 68902..69156 | - | 255 | WP_032187317.1 | hypothetical protein | - |
| KFU74_RS23430 (KFU74_23285) | 69149..69787 | - | 639 | WP_000049675.1 | ATP-binding cassette domain-containing protein | - |
| KFU74_RS23435 (KFU74_23290) | 69784..70452 | - | 669 | WP_257233037.1 | ParB/Srx family N-terminal domain-containing protein | - |
| KFU74_RS23440 (KFU74_23295) | 70452..71132 | - | 681 | WP_000382660.1 | ParB N-terminal domain-containing protein | - |
| KFU74_RS23445 (KFU74_23300) | 71215..72774 | + | 1560 | WP_021520107.1 | DEAD/DEAH box helicase | - |
| KFU74_RS23450 (KFU74_23305) | 72777..73055 | + | 279 | WP_001291061.1 | hypothetical protein | - |
| KFU74_RS23455 (KFU74_23310) | 73121..73687 | + | 567 | WP_257233038.1 | hypothetical protein | - |
| KFU74_RS23460 (KFU74_23315) | 73990..74580 | + | 591 | WP_063091537.1 | hypothetical protein | - |
| KFU74_RS23465 (KFU74_23320) | 74580..75104 | + | 525 | WP_063091536.1 | transcriptional regulator | - |
| KFU74_RS23470 (KFU74_23325) | 75420..76070 | + | 651 | WP_257233041.1 | hypothetical protein | - |
| KFU74_RS23475 (KFU74_23330) | 76118..76348 | + | 231 | WP_257233042.1 | hypothetical protein | - |
| KFU74_RS23480 (KFU74_23335) | 76965..77447 | - | 483 | WP_001009193.1 | hypothetical protein | - |
| KFU74_RS23485 (KFU74_23340) | 77798..78172 | - | 375 | WP_000522000.1 | hypothetical protein | - |
| KFU74_RS23490 (KFU74_23345) | 78290..78685 | - | 396 | WP_072647501.1 | hypothetical protein | - |
| KFU74_RS23495 (KFU74_23350) | 78812..79123 | - | 312 | WP_000749406.1 | hypothetical protein | - |
| KFU74_RS23500 (KFU74_23355) | 79277..79606 | - | 330 | WP_001755489.1 | hypothetical protein | - |
| KFU74_RS23505 (KFU74_23360) | 81171..81731 | - | 561 | WP_021520100.1 | hypothetical protein | - |
| KFU74_RS23510 (KFU74_23365) | 81893..82078 | - | 186 | WP_000910476.1 | hypothetical protein | - |
| KFU74_RS23515 (KFU74_23370) | 82115..82336 | - | 222 | WP_001717178.1 | hypothetical protein | - |
| KFU74_RS23520 (KFU74_23375) | 82576..84609 | - | 2034 | WP_001755492.1 | methionine--tRNA ligase | - |
| KFU74_RS23525 (KFU74_23380) | 84767..85867 | + | 1101 | WP_000004356.1 | iron-sulfur cluster carrier protein ApbC | - |
| KFU74_RS23530 (KFU74_23385) | 85904..86293 | - | 390 | WP_000506720.1 | S24 family peptidase | - |
| KFU74_RS23535 (KFU74_23390) | 86392..86643 | - | 252 | WP_001755493.1 | DNA polymerase III subunit theta | - |
| KFU74_RS23540 (KFU74_23395) | 87001..88557 | + | 1557 | WP_124047368.1 | type I restriction-modification system subunit M | - |
| KFU74_RS23545 (KFU74_23400) | 88554..89774 | + | 1221 | WP_257233043.1 | restriction endonuclease subunit S | - |
| KFU74_RS23550 (KFU74_23405) | 89896..93012 | + | 3117 | WP_257233044.1 | HsdR family type I site-specific deoxyribonuclease | - |
| KFU74_RS23555 (KFU74_23410) | 93071..93547 | - | 477 | WP_063091494.1 | hypothetical protein | - |
| KFU74_RS23560 (KFU74_23415) | 93651..94265 | - | 615 | WP_089689307.1 | hypothetical protein | - |
| KFU74_RS23565 (KFU74_23420) | 94604..95173 | - | 570 | WP_025670505.1 | hypothetical protein | - |
| KFU74_RS23570 (KFU74_23425) | 95313..95471 | - | 159 | WP_014962273.1 | DUF3927 family protein | - |
| KFU74_RS23575 (KFU74_23430) | 95471..95896 | - | 426 | WP_000900261.1 | tellurite/colicin resistance protein | - |
| KFU74_RS23580 (KFU74_23435) | 95990..96178 | - | 189 | WP_001103988.1 | hypothetical protein | - |
| KFU74_RS23585 (KFU74_23440) | 96188..96682 | - | 495 | WP_257233047.1 | hypothetical protein | - |
| KFU74_RS23590 (KFU74_23445) | 96825..97504 | - | 680 | Protein_97 | ribonuclease HI | - |
| KFU74_RS23595 (KFU74_23450) | 98028..98258 | - | 231 | WP_025670509.1 | hypothetical protein | - |
| KFU74_RS23600 (KFU74_23455) | 98461..99054 | - | 594 | WP_025670510.1 | phage N-6-adenine-methyltransferase | - |
| KFU74_RS23605 (KFU74_23460) | 99210..100082 | - | 873 | WP_025670511.1 | hypothetical protein | - |
| KFU74_RS23610 (KFU74_23465) | 100211..100765 | - | 555 | WP_257233048.1 | 3'-5' exonuclease | - |
| KFU74_RS23615 (KFU74_23470) | 100775..101194 | - | 420 | WP_025670513.1 | hypothetical protein | - |
| KFU74_RS23620 (KFU74_23475) | 101258..101902 | - | 645 | WP_025670514.1 | AAA family ATPase | - |
| KFU74_RS23625 (KFU74_23480) | 101902..102378 | - | 477 | WP_025670515.1 | dihydrofolate reductase | - |
| KFU74_RS23630 (KFU74_23485) | 102375..102776 | - | 402 | WP_025670516.1 | hypothetical protein | - |
| KFU74_RS23635 (KFU74_23490) | 102790..103893 | - | 1104 | WP_219356804.1 | thymidylate synthase | - |
| KFU74_RS23640 (KFU74_23495) | 104064..104933 | - | 870 | WP_257188401.1 | phosphoribosyl-ATP pyrophosphohydrolase | - |
| KFU74_RS23645 (KFU74_23500) | 105199..105768 | - | 570 | WP_025670519.1 | hypothetical protein | - |
| KFU74_RS23650 (KFU74_23505) | 105765..106541 | - | 777 | WP_063091564.1 | hypothetical protein | - |
| KFU74_RS23655 (KFU74_23510) | 106517..107263 | - | 747 | WP_063091565.1 | hypothetical protein | - |
| KFU74_RS23660 (KFU74_23515) | 107253..109169 | - | 1917 | WP_025670522.1 | AAA family ATPase | - |
| KFU74_RS23665 | 109166..109444 | - | 279 | WP_032339196.1 | hypothetical protein | - |
| KFU74_RS23670 (KFU74_23520) | 109399..110484 | - | 1086 | WP_025670524.1 | metallophosphoesterase | - |
| KFU74_RS23675 (KFU74_23525) | 110881..111525 | - | 645 | WP_023135693.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|