MGE detailed information
MGE type: Prophage MGE length: 90667 bp
Accession: NZ_CP074001 Location: 3596489..3687155 Organism: Escherichia coli strain PM4 Replicon: chromosome
Accession: NZ_CP074001 Location: 3596489..3687155 Organism: Escherichia coli strain PM4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU80_RS17435 (3591896) | 3591896..3592234 | + | 339 | Protein_3411 | LysR substrate-binding domain-containing protein | - |
| KFU80_RS17440 (3592786) | 3592786..3592926 | + | 141 | Protein_3412 | SOS response-associated peptidase | - |
| KFU80_RS17445 (3593154) | 3593154..3593999 | + | 846 | WP_257187696.1 | AAA family ATPase | - |
| KFU80_RS17450 (3593992) | 3593992..3594390 | + | 399 | WP_032207598.1 | hypothetical protein | - |
| KFU80_RS17455 (3594390) | 3594390..3595055 | + | 666 | WP_000957441.1 | hypothetical protein | - |
| KFU80_RS17460 (3595093) | 3595093..3595474 | - | 382 | Protein_3416 | DUF4113 domain-containing protein | - |
| KFU80_RS17465 (3595472) | 3595472..3595555 | + | 84 | Protein_3417 | DinI family protein | - |
| KFU80_RS17470 (3595720) | 3595720..3595848 | - | 129 | Protein_3418 | helix-turn-helix domain-containing protein | - |
| KFU80_RS17475 (3595933) | 3595933..3596478 | + | 546 | WP_032178340.1 | serine acetyltransferase | - |
| KFU80_RS17480 (3596489) | 3596489..3597061 | - | 573 | WP_032178339.1 | tail fiber assembly protein | - |
| KFU80_RS17485 (3597061) | 3597061..3600087 | - | 3027 | WP_192525975.1 | phage tail protein | - |
| KFU80_RS17490 (3600152) | 3600152..3600751 | - | 600 | WP_195808092.1 | hypothetical protein | VF |
| KFU80_RS17495 (3600822) | 3600822..3604319 | - | 3498 | WP_257187697.1 | host specificity protein J | - |
| KFU80_RS17500 (3604380) | 3604380..3604952 | - | 573 | WP_000847669.1 | tail assembly protein | - |
| KFU80_RS17505 (3604949) | 3604949..3605692 | - | 744 | WP_000194783.1 | C40 family peptidase | - |
| KFU80_RS17510 (3605698) | 3605698..3606396 | - | 699 | WP_001152639.1 | phage minor tail protein L | - |
| KFU80_RS17515 (3606396) | 3606396..3606725 | - | 330 | WP_000847379.1 | phage tail protein | - |
| KFU80_RS17520 (3606722) | 3606722..3609283 | - | 2562 | WP_195745296.1 | phage tail tape measure protein | - |
| KFU80_RS17525 (3609276) | 3609276..3609710 | - | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| KFU80_RS17530 (3609692) | 3609692..3610114 | - | 423 | WP_001676388.1 | phage minor tail protein G | - |
| KFU80_RS17535 (3610130) | 3610130..3610870 | - | 741 | WP_001345558.1 | phage tail protein | - |
| KFU80_RS17540 (3610878) | 3610878..3611273 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| KFU80_RS17545 (3611270) | 3611270..3611848 | - | 579 | WP_000975081.1 | phage tail protein | - |
| KFU80_RS17550 (3611860) | 3611860..3612213 | - | 354 | WP_024236217.1 | head-tail joining protein | - |
| KFU80_RS17555 (3612225) | 3612225..3612620 | - | 396 | WP_032318908.1 | DNA-packaging protein FI | - |
| KFU80_RS17560 (3612662) | 3612662..3613687 | - | 1026 | WP_024232991.1 | major capsid protein | - |
| KFU80_RS17565 (3613743) | 3613743..3614075 | - | 333 | WP_012304872.1 | head decoration protein | - |
| KFU80_RS17570 (3614085) | 3614085..3615404 | - | 1320 | WP_000123311.1 | S49 family peptidase | - |
| KFU80_RS17575 (3615385) | 3615385..3616986 | - | 1602 | WP_147715621.1 | phage portal protein | - |
| KFU80_RS17580 (3616983) | 3616983..3617189 | - | 207 | WP_000198149.1 | gpW family protein | - |
| KFU80_RS17585 (3617186) | 3617186..3619111 | - | 1926 | WP_257187698.1 | phage terminase large subunit family protein | - |
| KFU80_RS17590 (3619086) | 3619086..3619631 | - | 546 | WP_000453576.1 | DNA-packaging protein | - |
| KFU80_RS17595 (3620020) | 3620020..3620253 | + | 234 | WP_001663509.1 | YlcI/YnfO family protein | - |
| KFU80_RS17600 (3620310) | 3620310..3620720 | + | 411 | WP_000079508.1 | DUF1398 family protein | - |
| KFU80_RS17605 (3621072) | 3621072..3621224 | - | 153 | WP_001139678.1 | hypothetical protein | - |
| KFU80_RS17610 (3621212) | 3621212..3621679 | - | 468 | WP_000092273.1 | lysis protein | - |
| KFU80_RS17615 (3621676) | 3621676..3622173 | - | 498 | WP_001135261.1 | lysozyme RrrD | - |
| KFU80_RS17620 (3622173) | 3622173..3622388 | - | 216 | WP_000839582.1 | phage lysis protein EssD | - |
| KFU80_RS17625 (3622576) | 3622576..3623307 | - | 732 | WP_001146308.1 | helix-turn-helix domain-containing protein | - |
| KFU80_RS17630 (3623659) | 3623659..3624618 | - | 960 | WP_000592546.1 | DUF523 and DUF1722 domain-containing protein | - |
| KFU80_RS17635 (3624811) | 3624811..3625335 | + | 525 | WP_000780581.1 | lipocalin family protein | - |
| KFU80_RS17640 (3625491) | 3625491..3625868 | - | 378 | WP_001204777.1 | antiterminator Q family protein | - |
| KFU80_RS17645 (3625954) | 3625954..3626094 | - | 141 | WP_000971055.1 | YlcG family protein | - |
| KFU80_RS17650 (3626091) | 3626091..3626453 | - | 363 | WP_001099699.1 | crossover junction endodeoxyribonuclease RusA | - |
| KFU80_RS17655 (3626450) | 3626450..3626740 | - | 291 | WP_000774488.1 | DUF1364 domain-containing protein | - |
| KFU80_RS17660 (3626733) | 3626733..3626903 | - | 171 | WP_000224916.1 | NinE family protein | - |
| KFU80_RS17665 (3626903) | 3626903..3627358 | - | 456 | WP_001053031.1 | DNA base-flipping protein YbcN | - |
| KFU80_RS17670 (3627355) | 3627355..3627456 | - | 102 | WP_072097297.1 | hypothetical protein | - |
| KFU80_RS17675 (3627565) | 3627565..3627765 | - | 201 | WP_021548985.1 | hypothetical protein | - |
| KFU80_RS17680 (3628395) | 3628395..3628889 | - | 495 | WP_001224618.1 | type VI secretion system-associated protein TagO | - |
| KFU80_RS17685 (3629039) | 3629039..3629209 | - | 171 | Protein_3461 | protein ren | - |
| KFU80_RS17690 (3629206) | 3629206..3629907 | - | 702 | WP_257187699.1 | replication protein P | - |
| KFU80_RS17695 (3629904) | 3629904..3630923 | - | 1020 | WP_112035074.1 | replication protein | - |
| KFU80_RS17700 (3630920) | 3630920..3631459 | - | 540 | WP_139464214.1 | toxin YdaT domain-containing protein | - |
| KFU80_RS17705 (3631490) | 3631490..3631717 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| KFU80_RS17710 (3631828) | 3631828..3632520 | + | 693 | WP_001295669.1 | helix-turn-helix transcriptional regulator | - |
| KFU80_RS17715 (3632750) | 3632750..3633130 | + | 381 | WP_024225642.1 | outer membrane protein assembly factor BamE | - |
| KFU80_RS17720 (3633611) | 3633611..3633817 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| KFU80_RS17725 (3633895) | 3633895..3634191 | + | 297 | WP_000995420.1 | host-nuclease inhibitor Gam family protein | - |
| KFU80_RS17730 (3634197) | 3634197..3634982 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| KFU80_RS17735 (3634979) | 3634979..3635659 | + | 681 | WP_000186811.1 | YqaJ viral recombinase family protein | - |
| KFU80_RS17740 (3635656) | 3635656..3635817 | + | 162 | WP_257187700.1 | DUF1317 domain-containing protein | - |
| KFU80_RS17745 (3635810) | 3635810..3636367 | + | 558 | WP_000129285.1 | phage N-6-adenine-methyltransferase | - |
| KFU80_RS17750 (3636444) | 3636444..3636659 | + | 216 | WP_000188870.1 | hypothetical protein | - |
| KFU80_RS17755 (3636758) | 3636758..3636976 | + | 219 | WP_000763368.1 | TraR/DksA family transcriptional regulator | - |
| KFU80_RS17760 (3637024) | 3637024..3637302 | + | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| KFU80_RS17765 (3637274) | 3637274..3637624 | + | 351 | WP_000446903.1 | helix-turn-helix domain-containing protein | - |
| KFU80_RS17770 (3637546) | 3637546..3638664 | + | 1119 | WP_224628705.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| KFU80_RS17780 (3638869) | 3638869..3640122 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| KFU80_RS17785 (3640134) | 3640134..3641237 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| KFU80_RS17790 (3641525) | 3641525..3642580 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| KFU80_RS17795 (3642619) | 3642619..3643020 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3643738) | 3643738..3643818 | - | 81 | NuclAT_11 | - | - |
| - (3643738) | 3643738..3643818 | - | 81 | NuclAT_11 | - | - |
| - (3643738) | 3643738..3643818 | - | 81 | NuclAT_11 | - | - |
| - (3643738) | 3643738..3643818 | - | 81 | NuclAT_11 | - | - |
| KFU80_RS17800 (3643078) | 3643078..3644322 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| KFU80_RS17805 (3644414) | 3644414..3644872 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| KFU80_RS17810 (3645133) | 3645133..3646590 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| KFU80_RS17815 (3646647) | 3646647..3647168 | - | 522 | Protein_3486 | peptide chain release factor H | - |
| KFU80_RS17820 (3647167) | 3647167..3647370 | - | 204 | Protein_3487 | RtcB family protein | - |
| KFU80_RS17825 (3647616) | 3647616..3648068 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| KFU80_RS17830 (3648078) | 3648078..3648476 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| KFU80_RS17835 (3648479) | 3648479..3648772 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| KFU80_RS17840 (3648824) | 3648824..3649879 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| KFU80_RS17845 (3649950) | 3649950..3650735 | - | 786 | WP_000207564.1 | hypothetical protein | VF |
| KFU80_RS17850 (3650707) | 3650707..3652419 | + | 1713 | Protein_3493 | hypothetical protein | VF |
| KFU80_RS17855 (3652643) | 3652643..3653140 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| KFU80_RS17860 (3653316) | 3653316..3654089 | - | 774 | WP_001355630.1 | hypothetical protein | VF |
| KFU80_RS17865 (3654275) | 3654275..3654535 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| KFU80_RS17870 (3654538) | 3654538..3654807 | + | 270 | Protein_3497 | type II toxin-antitoxin system YafQ family toxin | - |
| KFU80_RS17875 (3654963) | 3654963..3655703 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| KFU80_RS17880 (3655674) | 3655674..3656441 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| KFU80_RS17885 (3656647) | 3656647..3657225 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| KFU80_RS17890 (3657465) | 3657465..3659909 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| KFU80_RS17895 (3659952) | 3659952..3660398 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| KFU80_RS17900 (3660579) | 3660579..3661349 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| KFU80_RS17905 (3661390) | 3661390..3662526 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| KFU80_RS17910 (3662705) | 3662705..3663402 | + | 698 | WP_223419586.1 | IS1 family transposase | - |
| KFU80_RS17915 (3663733) | 3663733..3664125 | - | 393 | WP_257187701.1 | DUF4367 domain-containing protein | - |
| KFU80_RS17920 (3664103) | 3664103..3668335 | - | 4233 | WP_219357493.1 | hypothetical protein | VF |
| KFU80_RS17925 (3668412) | 3668412..3668861 | - | 450 | WP_001372445.1 | RHS element protein dsORF-h1 | - |
| KFU80_RS17930 (3668932) | 3668932..3670068 | - | 1137 | WP_000420722.1 | ISAs1 family transposase ISEc1 | Transposase |
| KFU80_RS17940 (3670847) | 3670847..3671434 | - | 588 | Protein_3511 | hypothetical protein | - |
| KFU80_RS17950 (3671971) | 3671971..3672702 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| KFU80_RS17955 (3672767) | 3672767..3673234 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| KFU80_RS17960 (3673231) | 3673231..3673953 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| KFU80_RS17965 (3673987) | 3673987..3674742 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| KFU80_RS17970 (3674814) | 3674814..3676172 | + | 1359 | WP_000644685.1 | hypothetical protein | VF |
| KFU80_RS17975 (3676220) | 3676220..3676816 | - | 597 | Protein_3517 | methyltransferase domain-containing protein | - |
| KFU80_RS17980 (3676847) | 3676847..3677647 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| KFU80_RS17985 (3677888) | 3677888..3678802 | + | 915 | WP_000648572.1 | HTH-type transcriptional regulator ArgP | VF |
| KFU80_RS17990 (3678799) | 3678799..3679602 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| KFU80_RS18025 (3685361) | 3685361..3685936 | - | 576 | WP_001140187.1 | Histidine biosynthesis bifunctional protein HisB | VF |
| KFU80_RS18030 (3686124) | 3686124..3687155 | + | 1032 | WP_000594006.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| KFU80_RS18035 (3687148) | 3687148..3687801 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| KFU80_RS18040 (3687841) | 3687841..3688656 | + | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| KFU80_RS18045 (3688774) | 3688774..3689178 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| KFU80_RS18050 (3689175) | 3689175..3689882 | + | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| KFU80_RS18055 (3689994) | 3689994..3691712 | + | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|