MGE detailed information
MGE type: Prophage MGE length: 75027 bp
Accession: NZ_CP072539 Location: 2489337..2564363 Organism: Escherichia coli O128ac:H12 strain AW1.7 Replicon: chromosome
Accession: NZ_CP072539 Location: 2489337..2564363 Organism: Escherichia coli O128ac:H12 strain AW1.7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J7886_RS12050 (2485437) | 2485437..2486471 | - | 1035 | WP_001118241.1 | AI-2 transporter TqsA | - |
| J7886_RS12055 (2486883) | 2486883..2487248 | + | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| J7886_RS12060 (2487235) | 2487235..2487564 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| J7886_RS12065 (2487603) | 2487603..2488424 | - | 822 | WP_001260857.1 | serine protease | - |
| J7886_RS12070 (2488524) | 2488524..2488607 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| J7886_RS12075 (2488700) | 2488700..2489008 | - | 309 | WP_001414237.1 | acid resistance repetitive basic protein Asr | - |
| J7886_RS12080 (2489337) | 2489337..2490034 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| J7886_RS12090 (2490209) | 2490209..2491462 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| J7886_RS12095 (2491569) | 2491569..2492462 | + | 894 | WP_001019536.1 | Hca operon transcriptional activator HcaR | VF |
| J7886_RS12100 (2492597) | 2492597..2493817 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| J7886_RS12105 (2493942) | 2493942..2494637 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| J7886_RS12110 (2494590) | 2494590..2495882 | - | 1293 | WP_071586743.1 | voltage-gated ClC-type chloride channel ClcB | - |
| J7886_RS12115 (2496041) | 2496041..2496655 | - | 615 | WP_000148706.1 | Tat proofreading chaperone DmsD | - |
| J7886_RS12120 (2496698) | 2496698..2497552 | - | 855 | WP_000526505.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| J7886_RS12125 (2497554) | 2497554..2498171 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| J7886_RS12130 (2498182) | 2498182..2500605 | - | 2424 | WP_072146368.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| J7886_RS12135 (2500666) | 2500666..2502975 | - | 2310 | Protein_2387 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| J7886_RS12140 (2503029) | 2503029..2503997 | - | 969 | WP_077898063.1 | IS5 family transposase IS903B | Transposase |
| J7886_RS12145 (2504028) | 2504028..2504213 | - | 186 | Protein_2389 | FlxA-like family protein | - |
| J7886_RS12150 (2504416) | 2504416..2504721 | - | 306 | WP_001326990.1 | protein YdfV | - |
| J7886_RS12155 (2504746) | 2504746..2504985 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| J7886_RS12160 (2504985) | 2504985..2505272 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| J7886_RS12165 (2505344) | 2505344..2505499 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| J7886_RS12170 (2505716) | 2505716..2505967 | + | 252 | WP_000980994.1 | protein Rem | - |
| J7886_RS12175 (2506034) | 2506034..2506312 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| J7886_RS12180 (2506314) | 2506314..2507363 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| J7886_RS12185 (2507377) | 2507377..2508129 | + | 753 | WP_001047135.1 | antitermination protein | - |
| J7886_RS12190 (2508407) | 2508407..2508496 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| J7886_RS12195 (2508551) | 2508551..2508763 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| J7886_RS12200 (2509064) | 2509064..2509279 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| J7886_RS25030 (2509643) | 2509643..2509813 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| J7886_RS12205 (2510033) | 2510033..2510248 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| J7886_RS12210 (2510253) | 2510253..2510564 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| J7886_RS12215 (2510561) | 2510561..2511094 | + | 534 | WP_001092971.1 | lysozyme | - |
| J7886_RS12220 (2511091) | 2511091..2511588 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| J7886_RS12225 (2511951) | 2511951..2512163 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| J7886_RS12230 (2512174) | 2512174..2512362 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| J7886_RS12235 (2512365) | 2512365..2512430 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| J7886_RS12240 (2512435) | 2512435..2512665 | + | 231 | WP_000720962.1 | protein YnfN | - |
| J7886_RS12245 (2512837) | 2512837..2513010 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| J7886_RS12250 (2513162) | 2513162..2513572 | - | 411 | WP_054626330.1 | DUF1398 domain-containing protein | - |
| J7886_RS12255 (2513630) | 2513630..2513863 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| J7886_RS12260 (2514252) | 2514252..2514797 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| J7886_RS12265 (2514772) | 2514772..2516697 | + | 1926 | WP_001027293.1 | phage terminase large subunit family protein | - |
| J7886_RS12270 (2516694) | 2516694..2516900 | + | 207 | WP_000198149.1 | gpW family protein | - |
| J7886_RS12275 (2516897) | 2516897..2518498 | + | 1602 | WP_001529148.1 | phage portal protein | - |
| J7886_RS12280 (2518479) | 2518479..2519798 | + | 1320 | WP_000123311.1 | S49 family peptidase | - |
| J7886_RS12285 (2519808) | 2519808..2520140 | + | 333 | WP_012304872.1 | head decoration protein | - |
| J7886_RS12290 (2520196) | 2520196..2521119 | + | 924 | Protein_2419 | major capsid protein | - |
| J7886_RS12295 (2521214) | 2521214..2523691 | - | 2478 | WP_054622814.1 | phage tail tape measure protein | - |
| J7886_RS12300 (2523724) | 2523724..2524317 | - | 594 | WP_054622813.1 | hypothetical protein | - |
| J7886_RS12305 (2524319) | 2524319..2524933 | - | 615 | WP_054622812.1 | hypothetical protein | - |
| J7886_RS12310 (2524976) | 2524976..2525332 | - | 357 | WP_054622811.1 | Mor transcription activator family protein | - |
| J7886_RS12315 (2525572) | 2525572..2525862 | - | 291 | WP_054622810.1 | hypothetical protein | - |
| J7886_RS12320 (2525859) | 2525859..2526602 | - | 744 | WP_054622809.1 | hypothetical protein | - |
| J7886_RS12325 (2526741) | 2526741..2526932 | + | 192 | WP_054622808.1 | toxin-antitoxin system HicB family antitoxin | - |
| J7886_RS12330 (2527070) | 2527070..2527414 | + | 345 | WP_054622807.1 | hypothetical protein | - |
| J7886_RS12335 (2528395) | 2528395..2528739 | + | 345 | WP_054622806.1 | DUF3486 family protein | - |
| J7886_RS12340 (2529023) | 2529023..2529418 | + | 396 | WP_032318908.1 | DNA-packaging protein FI | - |
| J7886_RS12345 (2529430) | 2529430..2529783 | + | 354 | WP_000753001.1 | head-tail joining protein | - |
| J7886_RS12350 (2529795) | 2529795..2530373 | + | 579 | WP_001541219.1 | phage tail protein | - |
| J7886_RS12355 (2530370) | 2530370..2530765 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| J7886_RS12360 (2530773) | 2530773..2531513 | + | 741 | WP_001528302.1 | phage tail protein | - |
| J7886_RS12365 (2531529) | 2531529..2531951 | + | 423 | WP_000479146.1 | phage minor tail protein G | - |
| J7886_RS12370 (2531933) | 2531933..2532367 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| J7886_RS12375 (2532360) | 2532360..2534921 | + | 2562 | WP_054626332.1 | phage tail tape measure protein | - |
| J7886_RS12380 (2534918) | 2534918..2535247 | + | 330 | WP_000847345.1 | phage tail protein | - |
| J7886_RS12385 (2535247) | 2535247..2535945 | + | 699 | WP_001152619.1 | phage minor tail protein L | - |
| J7886_RS12390 (2535951) | 2535951..2536694 | + | 744 | WP_044723263.1 | C40 family peptidase | - |
| J7886_RS12395 (2536691) | 2536691..2537263 | + | 573 | WP_000847668.1 | tail assembly protein | - |
| J7886_RS12400 (2537324) | 2537324..2539831 | + | 2508 | Protein_2441 | host specificity protein J | - |
| J7886_RS12405 (2539932) | 2539932..2541160 | + | 1229 | WP_211046099.1 | IS3 family transposase IS2 | Transposase |
| J7886_RS12410 (2541174) | 2541174..2542139 | + | 966 | Protein_2443 | DUF1983 domain-containing protein | - |
| J7886_RS12415 (2542207) | 2542207..2542806 | + | 600 | WP_001233110.1 | Outer membrane protein X | VF |
| J7886_RS12420 (2542871) | 2542871..2546221 | + | 3351 | WP_072188646.1 | prophage tail fiber N-terminal domain-containing protein | - |
| J7886_RS12425 (2546221) | 2546221..2546796 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| J7886_RS12430 (2546894) | 2546894..2547370 | - | 477 | WP_072188601.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| J7886_RS12440 (2548121) | 2548121..2548261 | - | 141 | Protein_2449 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| J7886_RS12445 (2548578) | 2548578..2548811 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| J7886_RS12450 (2548880) | 2548880..2548993 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| J7886_RS12455 (2549597) | 2549597..2550880 | + | 1284 | Protein_2452 | MHS family MFS transporter YdfJ | - |
| J7886_RS12460 (2550969) | 2550969..2552429 | + | 1461 | WP_000527778.1 | mannitol dehydrogenase family protein | - |
| J7886_RS12465 (2552465) | 2552465..2552668 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| J7886_RS12470 (2552845) | 2552845..2553531 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| J7886_RS12475 (2553620) | 2553620..2554366 | - | 747 | WP_001324973.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| J7886_RS12480 (2554503) | 2554503..2556548 | + | 2046 | WP_001549225.1 | peptidyl-dipeptidase Dcp | - |
| J7886_RS12485 (2556593) | 2556593..2557111 | - | 519 | WP_001024561.1 | 2-oxo-tetronate isomerase | - |
| J7886_RS12490 (2557387) | 2557387..2557779 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| J7886_RS12495 (2558034) | 2558034..2558924 | + | 891 | WP_000592826.1 | diguanylate cyclase DgcZ | - |
| J7886_RS25040 (2559039) | 2559039..2559143 | - | 105 | WP_211180496.1 | protein MgtT | - |
| J7886_RS12500 (2559143) | 2559143..2559238 | - | 96 | WP_000901367.1 | protein MgtS | - |
| J7886_RS12505 (2559365) | 2559365..2560552 | - | 1188 | WP_001054189.1 | efflux MFS transporter YdeE | - |
| J7886_RS12510 (2560747) | 2560747..2561646 | + | 900 | WP_000087214.1 | O-acetylserine/cysteine exporter | - |
| J7886_RS12515 (2561677) | 2561677..2561895 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| J7886_RS12520 (2561927) | 2561927..2562310 | - | 384 | WP_000091199.1 | Multiple antibiotic resistance protein MarA | VF |
| J7886_RS12525 (2562330) | 2562330..2562764 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| J7886_RS12530 (2562983) | 2562983..2563303 | + | 321 | WP_000273128.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J7886_RS12535 (2563293) | 2563293..2563577 | + | 285 | WP_000268704.1 | helix-turn-helix transcriptional regulator | - |
| J7886_RS12540 (2563698) | 2563698..2564363 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| J7886_RS12545 (2564388) | 2564388..2565578 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| J7886_RS12550 (2565728) | 2565728..2566842 | - | 1115 | Protein_2472 | putative protein YneK | - |
| J7886_RS12555 (2566920) | 2566920..2567801 | - | 882 | WP_000366501.1 | LysR family transcriptional regulator | - |
| J7886_RS12560 (2567902) | 2567902..2569290 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|