MGE detailed information
MGE type: Prophage MGE length: 91278 bp
Accession: NZ_CP071970 Location: 1240869..1332146 Organism: Bacillus amyloliquefaciens strain XJ5 Replicon: chromosome
Accession: NZ_CP071970 Location: 1240869..1332146 Organism: Bacillus amyloliquefaciens strain XJ5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J4048_RS06290 (1236826) | 1236826..1237824 | + | 999 | WP_007407297.1 | LacI family DNA-binding transcriptional regulator | - |
| J4048_RS06295 (1237900) | 1237900..1239345 | + | 1446 | WP_039251819.1 | tagaturonate reductase | - |
| J4048_RS06300 (1239342) | 1239342..1240835 | + | 1494 | WP_039251816.1 | altronate dehydratase family protein | - |
| J4048_RS06305 (1240869) | 1240869..1241633 | - | 765 | WP_007610763.1 | sulfite exporter TauE/SafE family protein | - |
| J4048_RS06310 (1241778) | 1241778..1242245 | - | 468 | WP_015417279.1 | DinB family protein | - |
| J4048_RS06315 (1242451) | 1242451..1243587 | + | 1137 | WP_087920760.1 | tetratricopeptide repeat protein | - |
| J4048_RS06320 (1243577) | 1243577..1243711 | + | 135 | WP_003154881.1 | PhrA family phosphatase inhibitor | - |
| J4048_RS06325 (1243854) | 1243854..1244807 | + | 954 | WP_015417280.1 | N-acetylmuramoyl-L-alanine amidase CwlA | VF |
| J4048_RS06330 (1244844) | 1244844..1245221 | - | 378 | WP_007610770.1 | PH domain-containing protein | - |
| J4048_RS06335 (1245331) | 1245331..1245933 | + | 603 | WP_015417281.1 | poly-gamma-glutamate hydrolase family protein | - |
| J4048_RS06340 (1246004) | 1246004..1246840 | + | 837 | WP_040238256.1 | manganese catalase family protein | - |
| J4048_RS06345 (1246862) | 1246862..1247452 | - | 591 | WP_007610775.1 | ImmA/IrrE family metallo-endopeptidase | - |
| J4048_RS06350 (1247601) | 1247601..1247939 | - | 339 | WP_003154871.1 | HTH-type transcriptional regulator Xre | - |
| J4048_RS06355 (1248130) | 1248130..1248309 | + | 180 | WP_031378816.1 | hypothetical protein | - |
| J4048_RS06360 (1248299) | 1248299..1249126 | + | 828 | WP_040238252.1 | hypothetical protein | - |
| J4048_RS06365 (1249026) | 1249026..1249826 | + | 801 | WP_031378815.1 | IS21 family transposase ISPa36 | Transposase |
| J4048_RS06370 (1249826) | 1249826..1249993 | + | 168 | WP_095352209.1 | hypothetical protein | - |
| J4048_RS06375 (1250091) | 1250091..1250432 | + | 342 | WP_007407281.1 | hypothetical protein | - |
| J4048_RS06380 (1250422) | 1250422..1250625 | + | 204 | WP_007407280.1 | XtrA/YqaO family protein | - |
| J4048_RS06385 (1250739) | 1250739..1251251 | + | 513 | WP_012117362.1 | sigma-70 family RNA polymerase sigma factor | - |
| J4048_RS06390 (1251364) | 1251364..1252161 | + | 798 | WP_007407278.1 | terminase small subunit | - |
| J4048_RS06395 (1252158) | 1252158..1253456 | + | 1299 | WP_033574559.1 | PBSX family phage terminase large subunit | - |
| J4048_RS06400 (1253505) | 1253505..1254896 | + | 1392 | WP_094031916.1 | phage portal protein | - |
| J4048_RS06405 (1254916) | 1254916..1255761 | + | 846 | WP_007407275.1 | XkdF-like putative serine protease domain-containing protein | - |
| J4048_RS06410 (1255788) | 1255788..1256723 | + | 936 | WP_007407274.1 | phage major capsid protein | - |
| J4048_RS06415 (1256740) | 1256740..1257123 | + | 384 | WP_015417287.1 | DUF3199 family protein | - |
| J4048_RS06420 (1257120) | 1257120..1257476 | + | 357 | WP_007407272.1 | DUF3599 family protein | - |
| J4048_RS06425 (1257473) | 1257473..1257976 | + | 504 | WP_040238248.1 | HK97 gp10 family phage protein | - |
| J4048_RS06430 (1257973) | 1257973..1258419 | + | 447 | WP_015417289.1 | hypothetical protein | - |
| J4048_RS06435 (1258416) | 1258416..1258625 | + | 210 | WP_007610809.1 | hypothetical protein | - |
| J4048_RS06440 (1258625) | 1258625..1260022 | + | 1398 | WP_007610810.1 | phage tail sheath family protein | - |
| J4048_RS06445 (1260024) | 1260024..1260467 | + | 444 | WP_003154837.1 | phage tail tube protein | - |
| J4048_RS06450 (1260544) | 1260544..1260990 | + | 447 | WP_003154836.1 | phage portal protein | - |
| J4048_RS06455 (1261032) | 1261032..1261184 | + | 153 | WP_015239684.1 | hypothetical protein | - |
| J4048_RS06460 (1261172) | 1261172..1266295 | + | 5124 | WP_061890557.1 | transglycosylase SLT domain-containing protein | - |
| J4048_RS06465 (1266288) | 1266288..1266947 | + | 660 | WP_040238238.1 | LysM peptidoglycan-binding domain-containing protein | - |
| J4048_RS06470 (1266961) | 1266961..1267938 | + | 978 | WP_015417291.1 | hypothetical protein | - |
| J4048_RS06475 (1267938) | 1267938..1268204 | + | 267 | WP_007610818.1 | DUF2577 family protein | - |
| J4048_RS06480 (1268308) | 1268308..1268733 | + | 426 | WP_015417292.1 | DUF2634 domain-containing protein | - |
| J4048_RS06485 (1268726) | 1268726..1269772 | + | 1047 | WP_015417293.1 | baseplate J/gp47 family protein | - |
| J4048_RS06490 (1269756) | 1269756..1270334 | + | 579 | WP_015239689.1 | YmfQ family protein | - |
| J4048_RS06495 (1270331) | 1270331..1270603 | + | 273 | WP_003154822.1 | hypothetical protein | - |
| J4048_RS06500 (1270606) | 1270606..1272237 | + | 1632 | WP_015417294.1 | pyocin knob domain-containing protein | - |
| J4048_RS06505 (1272250) | 1272250..1272621 | + | 372 | WP_015417295.1 | XkdW family protein | - |
| J4048_RS06510 (1272626) | 1272626..1272823 | + | 198 | WP_012117366.1 | XkdX family protein | - |
| J4048_RS06515 (1272880) | 1272880..1273641 | + | 762 | WP_033575307.1 | hypothetical protein | - |
| J4048_RS06520 (1273693) | 1273693..1273956 | + | 264 | WP_003154815.1 | hemolysin XhlA family protein | - |
| J4048_RS06525 (1273970) | 1273970..1274233 | + | 264 | WP_003154813.1 | phage holin | - |
| J4048_RS06530 (1274247) | 1274247..1275125 | + | 879 | WP_007407257.1 | hypothetical protein | VF |
| J4048_RS06535 (1275383) | 1275383..1275553 | - | 171 | WP_003154807.1 | type II toxin-antitoxin system SpoIISB family antitoxin | Antitoxin Detail |
| J4048_RS06540 (1275554) | 1275554..1276300 | - | 747 | WP_007407256.1 | type II toxin-antitoxin system SpoIISA family toxin | Toxin Detail |
| J4048_RS06545 (1276404) | 1276404..1277402 | - | 999 | WP_003154805.1 | inorganic phosphate transporter | - |
| J4048_RS06550 (1277415) | 1277415..1278032 | - | 618 | WP_003154804.1 | DUF47 domain-containing protein | - |
| J4048_RS06555 (1278318) | 1278318..1279634 | - | 1317 | WP_007610842.1 | amino acid permease | - |
| J4048_RS06560 (1279957) | 1279957..1280907 | + | 951 | WP_012117369.1 | ring-cleaving dioxygenase | - |
| J4048_RS06565 (1281089) | 1281089..1283236 | + | 2148 | WP_062623322.1 | glycosyltransferase family 39 protein | - |
| J4048_RS06570 (1283248) | 1283248..1284219 | + | 972 | WP_007610846.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| J4048_RS06575 (1284305) | 1284305..1284481 | - | 177 | WP_014417532.1 | hypothetical protein | - |
| J4048_RS06580 (1284581) | 1284581..1285930 | - | 1350 | WP_031378806.1 | hypothetical protein | VF |
| J4048_RS06585 (1286217) | 1286217..1287752 | + | 1536 | WP_040238232.1 | MFS transporter | - |
| J4048_RS06590 (1287908) | 1287908..1288732 | + | 825 | WP_007407248.1 | M55 family metallopeptidase | - |
| J4048_RS06595 (1288747) | 1288747..1289673 | + | 927 | WP_007610853.1 | ABC transporter permease | - |
| J4048_RS06600 (1289679) | 1289679..1290626 | + | 948 | WP_003154782.1 | ABC transporter permease | - |
| J4048_RS06605 (1290632) | 1290632..1291660 | + | 1029 | WP_033575301.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| J4048_RS06610 (1291657) | 1291657..1293276 | + | 1620 | WP_039251738.1 | peptide ABC transporter substrate-binding protein | - |
| J4048_RS06615 (1293352) | 1293352..1294299 | + | 948 | WP_162782992.1 | LD-carboxypeptidase | - |
| J4048_RS06620 (1294306) | 1294306..1295403 | + | 1098 | WP_039251734.1 | dipeptide epimerase | - |
| J4048_RS06625 (1295400) | 1295400..1296299 | + | 900 | WP_039251729.1 | hypothetical protein | VF |
| J4048_RS06630 (1296303) | 1296303..1297274 | + | 972 | WP_007610864.1 | ATP-binding cassette domain-containing protein | - |
| J4048_RS06635 (1297302) | 1297302..1298351 | - | 1050 | WP_025284622.1 | lactonase family protein | - |
| J4048_RS06640 (1298422) | 1298422..1299282 | - | 861 | WP_039251726.1 | dimethylarginine dimethylaminohydrolase family protein | - |
| J4048_RS06645 (1299472) | 1299472..1299990 | + | 519 | WP_007407238.1 | acyl-CoA thioesterase | - |
| J4048_RS06650 (1300090) | 1300090..1300635 | + | 546 | WP_039251722.1 | GNAT family N-acetyltransferase | - |
| J4048_RS06655 (1300823) | 1300823..1301161 | + | 339 | WP_007407236.1 | multidrug efflux SMR transporter | - |
| J4048_RS06660 (1301161) | 1301161..1301475 | + | 315 | WP_007407235.1 | multidrug efflux SMR transporter | - |
| J4048_RS06665 (1301549) | 1301549..1302451 | + | 903 | WP_007407234.1 | formyltetrahydrofolate deformylase | - |
| J4048_RS06670 (1302821) | 1302821..1303933 | + | 1113 | WP_015417312.1 | glutamate 5-kinase | - |
| J4048_RS06675 (1303930) | 1303930..1305177 | + | 1248 | WP_039251718.1 | glutamate-5-semialdehyde dehydrogenase | - |
| J4048_RS06680 (1305291) | 1305291..1305716 | + | 426 | WP_039251715.1 | organic hydroperoxide resistance protein | - |
| J4048_RS06685 (1305744) | 1305744..1306253 | - | 510 | WP_015417314.1 | MarR family transcriptional regulator | - |
| J4048_RS06690 (1306329) | 1306329..1306739 | + | 411 | WP_015417315.1 | organic hydroperoxide resistance protein | - |
| J4048_RS22205 (1306880) | 1306880..1307464 | + | 585 | WP_039251710.1 | Levansucrase | VF |
| J4048_RS06700 (1307486) | 1307486..1307947 | + | 462 | WP_039251708.1 | hypothetical protein | - |
| J4048_RS06705 (1307952) | 1307952..1309079 | + | 1128 | WP_040238228.1 | glycosyltransferase | - |
| J4048_RS06710 (1309099) | 1309099..1310124 | - | 1026 | WP_039251701.1 | hypothetical protein | - |
| J4048_RS06715 (1310396) | 1310396..1311580 | - | 1185 | WP_039251699.1 | MFS transporter | - |
| J4048_RS06720 (1311662) | 1311662..1312333 | + | 672 | WP_039251696.1 | transcriptional regulator YeiL | - |
| J4048_RS06725 (1312384) | 1312384..1314672 | - | 2289 | WP_015417322.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
| J4048_RS06730 (1315050) | 1315050..1316009 | - | 960 | WP_031378790.1 | S8 family peptidase | - |
| J4048_RS06735 (1316229) | 1316229..1317062 | + | 834 | WP_039251693.1 | STAS domain-containing protein | - |
| J4048_RS06740 (1317108) | 1317108..1317869 | - | 762 | WP_040238225.1 | energy-coupling factor transporter transmembrane component T | - |
| J4048_RS06745 (1317844) | 1317844..1319481 | - | 1638 | WP_040238223.1 | Putative HMP/thiamine import ATP-binding protein YkoD | VF |
| J4048_RS06750 (1319468) | 1319468..1320067 | - | 600 | WP_003154744.1 | ECF transporter S component | - |
| J4048_RS06755 (1320509) | 1320509..1321771 | + | 1263 | WP_033574638.1 | Putative sporulation-specific glycosylase YdhD | VF |
| J4048_RS06760 (1321859) | 1321859..1321996 | + | 138 | WP_003154740.1 | transcriptional regulator SplA domain-containing protein | - |
| J4048_RS06765 (1322503) | 1322503..1323858 | + | 1356 | WP_012117400.1 | magnesium transporter | - |
| J4048_RS06770 (1323894) | 1323894..1324226 | - | 333 | WP_003154734.1 | MerR family transcriptional regulator TnrA | - |
| J4048_RS06775 (1324421) | 1324421..1324576 | + | 156 | WP_003154733.1 | hypothetical protein | - |
| J4048_RS06780 (1324665) | 1324665..1324847 | + | 183 | WP_003154731.1 | Fur-regulated basic protein FbpA | - |
| J4048_RS06785 (1324990) | 1324990..1325454 | + | 465 | WP_007610911.1 | MarR family transcriptional regulator | - |
| J4048_RS06790 (1325634) | 1325634..1326188 | + | 555 | WP_007407215.1 | hypothetical protein | - |
| J4048_RS06795 (1326198) | 1326198..1328033 | - | 1836 | WP_039251679.1 | DNA ligase D | - |
| J4048_RS06800 (1328036) | 1328036..1328917 | - | 882 | WP_007610913.1 | Ku protein | - |
| J4048_RS06805 (1329451) | 1329451..1330086 | + | 636 | WP_172437942.1 | DedA family protein | - |
| J4048_RS06810 (1330217) | 1330217..1331114 | + | 898 | Protein_1285 | TerC family protein | - |
| J4048_RS06815 (1331391) | 1331391..1332146 | + | 756 | WP_003154719.1 | RNA polymerase sigma factor SigI | - |
| J4048_RS06820 (1332143) | 1332143..1333312 | + | 1170 | WP_007407209.1 | anti-sigma factor domain-containing protein | - |
| J4048_RS06825 (1333319) | 1333319..1333513 | - | 195 | WP_039251672.1 | alpha/beta-type small acid-soluble spore protein | - |
| J4048_RS06830 (1333649) | 1333649..1334350 | - | 702 | WP_015417331.1 | DUF1836 domain-containing protein | - |
| J4048_RS06835 (1334498) | 1334498..1335391 | + | 894 | WP_007407207.1 | protease HtpX | - |
| J4048_RS06840 (1335550) | 1335550..1336902 | + | 1353 | WP_158185877.1 | TrkH family potassium uptake protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|