MGE detailed information
MGE type: Conjugative plasmid MGE length: 94345 bp
Accession: NZ_CP071713 Location: 1..94345 Organism: Escherichia coli strain EC20017429 Replicon: plasmid pL2
Accession: NZ_CP071713 Location: 1..94345 Organism: Escherichia coli strain EC20017429 Replicon: plasmid pL2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JQM62_RS28965 (JQM62_28720) | 1..873 | + | 873 | WP_000729440.1 | incFII family plasmid replication initiator RepA | - |
| JQM62_RS28970 (JQM62_28725) | 1568..1735 | + | 168 | WP_000841010.1 | hypothetical protein | - |
| JQM62_RS28975 (JQM62_28730) | 1822..2073 | + | 252 | WP_001139207.1 | plasmid stabilization protein | Antitoxin Detail |
| JQM62_RS28980 (JQM62_28735) | 2070..2357 | + | 288 | WP_000222775.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JQM62_RS28985 (JQM62_28740) | 2367..2912 | + | 546 | WP_000926984.1 | hypothetical protein | - |
| JQM62_RS28990 (JQM62_28745) | 3564..4166 | - | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| JQM62_RS28995 (JQM62_28750) | 4520..4759 | + | 240 | Protein_6 | hypothetical protein | - |
| JQM62_RS29000 (JQM62_28755) | 4794..7472 | - | 2679 | Protein_7 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| JQM62_RS29005 (JQM62_28760) | 7515..8219 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JQM62_RS29010 (JQM62_28765) | 8826..9128 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| JQM62_RS29015 (JQM62_28770) | 9125..9751 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| JQM62_RS29020 (JQM62_28775) | 9971..11242 | - | 1272 | WP_252604380.1 | Y-family DNA polymerase | - |
| JQM62_RS29025 (JQM62_28780) | 11242..11679 | - | 438 | WP_000109077.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JQM62_RS29030 (JQM62_28785) | 11676..11924 | - | 249 | WP_000619113.1 | DinI-like family protein | - |
| JQM62_RS29035 (JQM62_28790) | 12342..13244 | + | 903 | WP_023842311.1 | DUF1281 domain-containing protein | - |
| JQM62_RS29040 (JQM62_28795) | 13241..13552 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| JQM62_RS29045 (JQM62_28800) | 13629..14312 | + | 684 | WP_000086152.1 | DNA methylase | - |
| JQM62_RS29050 (JQM62_28805) | 14313..14534 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| JQM62_RS29055 (JQM62_28810) | 14548..14982 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| JQM62_RS29060 (JQM62_28815) | 15028..15804 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| JQM62_RS29065 (JQM62_28820) | 16222..16647 | + | 426 | WP_001198938.1 | antirestriction protein | - |
| JQM62_RS29070 (JQM62_28825) | 16694..17113 | + | 420 | WP_000271736.1 | DUF1380 family protein | - |
| JQM62_RS29075 (JQM62_28830) | 17113..17304 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| JQM62_RS29080 (JQM62_28835) | 17375..17689 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| JQM62_RS29085 (JQM62_28840) | 18073..18600 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| JQM62_RS29090 (JQM62_28845) | 18658..18891 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| JQM62_RS29095 (JQM62_28850) | 18950..20908 | + | 1959 | WP_001145479.1 | ParB/RepB/Spo0J family partition protein | - |
| JQM62_RS29100 (JQM62_28855) | 20963..21397 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| JQM62_RS29105 (JQM62_28860) | 21394..22113 | + | 720 | WP_001276263.1 | plasmid SOS inhibition protein A | - |
| JQM62_RS29110 (JQM62_28865) | 22110..22706 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| JQM62_RS29115 (JQM62_28870) | 23168..23668 | + | 501 | WP_104807818.1 | antirestriction protein ArdA | - |
| JQM62_RS29120 (JQM62_28875) | 24399..24833 | + | 435 | WP_000218850.1 | hypothetical protein | - |
| JQM62_RS29125 (JQM62_28880) | 24926..25192 | + | 267 | WP_001247861.1 | hypothetical protein | - |
| JQM62_RS29130 (JQM62_28885) | 25383..25772 | + | 390 | WP_001317525.1 | hypothetical protein | - |
| JQM62_RS29135 (JQM62_28890) | 25769..26659 | + | 891 | WP_021552460.1 | Recombination-promoting nuclease RpnA | VF |
| JQM62_RS29140 (JQM62_28895) | 26659..26880 | + | 222 | WP_001444727.1 | hypothetical protein | - |
| JQM62_RS29145 (JQM62_28900) | 26911..27162 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| JQM62_RS29150 (JQM62_28905) | 27271..27558 | - | 288 | WP_231248284.1 | hypothetical protein | - |
| JQM62_RS29155 (JQM62_28910) | 27740..28588 | + | 849 | WP_001546479.1 | DUF4942 domain-containing protein | - |
| JQM62_RS29160 (JQM62_28915) | 28672..29007 | - | 336 | WP_000157096.1 | hypothetical protein | - |
| JQM62_RS29165 (JQM62_28920) | 29240..29572 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| JQM62_RS29170 (JQM62_28925) | 29584..32295 | + | 2712 | WP_252604382.1 | Protein TraI | Relaxase |
| JQM62_RS29175 (JQM62_28930) | 32363..32794 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| JQM62_RS29180 (JQM62_28935) | 32892..33122 | - | 231 | WP_032072127.1 | hypothetical protein | - |
| JQM62_RS29185 (JQM62_28940) | 33601..35904 | - | 2304 | WP_000077655.1 | F-type conjugative transfer protein TrbC | - |
| JQM62_RS29190 (JQM62_28945) | 35885..37003 | - | 1119 | WP_176966454.1 | DsbC family protein | - |
| JQM62_RS29195 (JQM62_28950) | 37000..38289 | - | 1290 | WP_176966455.1 | IncI1-type conjugal transfer protein TrbA | - |
| JQM62_RS30145 | 38826..38921 | + | 96 | WP_000609151.1 | DinQ-like type I toxin DqlB | - |
| JQM62_RS29200 (JQM62_28955) | 39064..39375 | - | 312 | WP_000203481.1 | hypothetical protein | - |
| JQM62_RS29205 (JQM62_28960) | 39403..39594 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| JQM62_RS29210 (JQM62_28965) | 39604..39969 | - | 366 | WP_000997722.1 | hypothetical protein | - |
| JQM62_RS30150 | 40103..40228 | + | 126 | WP_264118052.1 | hypothetical protein | - |
| JQM62_RS29215 (JQM62_28970) | 40476..44555 | - | 4080 | WP_048239471.1 | Serine protease SepA autotransporter | VF |
| JQM62_RS29220 (JQM62_28975) | 44854..45551 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| JQM62_RS29225 (JQM62_28980) | 45725..46192 | - | 468 | WP_000598959.1 | thermonuclease family protein | - |
| JQM62_RS29230 (JQM62_28985) | 46352..46975 | + | 624 | WP_048239469.1 | hypothetical protein | - |
| JQM62_RS29235 (JQM62_28990) | 47063..47518 | + | 456 | WP_048239467.1 | DUF2569 family protein | - |
| JQM62_RS29240 (JQM62_28995) | 47719..49254 | + | 1536 | WP_176966449.1 | phosphoethanolamine transferase | - |
| JQM62_RS29245 (JQM62_29000) | 49347..49589 | - | 243 | WP_001398505.1 | hypothetical protein | - |
| JQM62_RS29250 (JQM62_29005) | 49922..50074 | + | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| JQM62_RS29255 (JQM62_29015) | 50388..51035 | - | 648 | WP_048239464.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JQM62_RS29260 (JQM62_29020) | 51123..53282 | - | 2160 | WP_048239462.1 | DotA/TraY family protein | - |
| JQM62_RS29265 (JQM62_29025) | 53355..53924 | - | 570 | WP_001204060.1 | conjugal transfer protein TraX | - |
| JQM62_RS29270 (JQM62_29030) | 53921..55126 | - | 1206 | WP_048239460.1 | conjugal transfer protein TraW | - |
| JQM62_RS29275 (JQM62_29035) | 55087..55704 | - | 618 | WP_000286857.1 | hypothetical protein | - |
| JQM62_RS29280 (JQM62_29040) | 55704..58748 | - | 3045 | WP_021552467.1 | hypothetical protein | - |
| JQM62_RS29285 (JQM62_29045) | 58924..59307 | - | 384 | WP_011310086.1 | hypothetical protein | - |
| JQM62_RS29290 (JQM62_29050) | 59304..59663 | - | 360 | WP_048239458.1 | hypothetical protein | - |
| JQM62_RS29295 (JQM62_29055) | 59718..60536 | - | 819 | WP_072094468.1 | conjugal transfer protein TraT | - |
| JQM62_RS30155 (JQM62_29060) | 60451..60702 | - | 252 | WP_001277575.1 | hypothetical protein | - |
| JQM62_RS29305 (JQM62_29065) | 60759..61157 | - | 399 | WP_000086068.1 | hypothetical protein | - |
| JQM62_RS29310 (JQM62_29070) | 61206..61736 | - | 531 | WP_000987022.1 | conjugal transfer protein TraQ | - |
| JQM62_RS29315 (JQM62_29075) | 61733..62446 | - | 714 | WP_048239456.1 | conjugal transfer protein TraP | - |
| JQM62_RS29320 (JQM62_29080) | 62443..63774 | - | 1332 | WP_176966451.1 | conjugal transfer protein TraO | - |
| JQM62_RS29325 (JQM62_29085) | 63778..64752 | - | 975 | WP_021526895.1 | hypothetical protein | VF |
| JQM62_RS29330 (JQM62_29090) | 64763..65458 | - | 696 | WP_001287261.1 | DotI/IcmL family type IV secretion protein | - |
| JQM62_RS29335 (JQM62_29095) | 65470..65820 | - | 351 | WP_001056365.1 | hypothetical protein | - |
| JQM62_RS29340 (JQM62_29100) | 65837..69853 | - | 4017 | WP_176966452.1 | DUF5710 domain-containing protein | - |
| JQM62_RS29345 (JQM62_29105) | 69917..70207 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| JQM62_RS29350 (JQM62_29110) | 70204..71352 | - | 1149 | WP_000625246.1 | putative protein YggR | VF |
| JQM62_RS29355 (JQM62_29115) | 71336..72172 | - | 837 | WP_000848138.1 | hypothetical protein | VF |
| JQM62_RS29360 (JQM62_29120) | 72169..72621 | - | 453 | WP_001081198.1 | DotD/TraH family lipoprotein | - |
| JQM62_RS29365 (JQM62_29125) | 72670..72840 | - | 171 | WP_000482367.1 | hypothetical protein | - |
| JQM62_RS29370 (JQM62_29130) | 72980..74182 | - | 1203 | WP_000980151.1 | conjugal transfer protein TraF | - |
| JQM62_RS29375 (JQM62_29135) | 74272..75093 | - | 822 | WP_000804090.1 | hypothetical protein | - |
| JQM62_RS29380 (JQM62_29140) | 75353..75673 | + | 321 | WP_000695052.1 | hypothetical protein | - |
| JQM62_RS29385 (JQM62_29145) | 75765..76055 | - | 291 | WP_000681898.1 | hypothetical protein | - |
| JQM62_RS29390 (JQM62_29150) | 76097..77266 | - | 1170 | WP_000486835.1 | site-specific integrase | - |
| JQM62_RS29395 (JQM62_29155) | 77881..79245 | - | 1365 | WP_001168072.1 | hypothetical protein | VF |
| JQM62_RS29400 (JQM62_29160) | 79250..79885 | - | 636 | WP_000478596.1 | prepilin peptidase | - |
| JQM62_RS29405 (JQM62_29165) | 79904..80377 | - | 474 | WP_000870986.1 | hypothetical protein | VF |
| JQM62_RS29410 (JQM62_29170) | 80431..80967 | - | 537 | WP_001011156.1 | type 4 pilus major pilin | - |
| JQM62_RS29415 (JQM62_29175) | 81041..82141 | - | 1101 | WP_000670135.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JQM62_RS29420 (JQM62_29180) | 82143..83651 | - | 1509 | WP_000886638.1 | Type II secretion system protein E | VF |
| JQM62_RS29425 (JQM62_29185) | 83736..84188 | - | 453 | WP_001112926.1 | type IV pilus biogenesis protein PilP | - |
| JQM62_RS29430 (JQM62_29190) | 84178..85473 | - | 1296 | WP_000129889.1 | type 4b pilus protein PilO2 | - |
| JQM62_RS29435 (JQM62_29195) | 85494..87113 | - | 1620 | WP_001034998.1 | Outer membrane lipoprotein BfpB | VF |
| JQM62_RS29440 (JQM62_29200) | 87144..87581 | - | 438 | WP_000539685.1 | type IV pilus biogenesis protein PilM | - |
| JQM62_RS29445 (JQM62_29205) | 87586..88656 | - | 1071 | WP_252604377.1 | hypothetical protein | VF |
| JQM62_RS29450 (JQM62_29210) | 88813..89148 | - | 336 | WP_024174020.1 | hypothetical protein | - |
| JQM62_RS29455 (JQM62_29215) | 89265..89507 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| JQM62_RS29460 (JQM62_29220) | 89588..91282 | - | 1695 | WP_000482671.1 | flotillin family protein | - |
| JQM62_RS29465 (JQM62_29225) | 91309..91929 | - | 621 | WP_000176503.1 | DUF1449 family protein | - |
| JQM62_RS29470 (JQM62_29230) | 92196..92861 | - | 666 | WP_000154143.1 | hypothetical protein | - |
| JQM62_RS29475 (JQM62_29235) | 93002..93643 | - | 642 | WP_000335846.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|