MGE detailed information
MGE type: Prophage MGE length: 65598 bp
Accession: NZ_CP071690 Location: 2649911..2715508 Organism: Salmonella sp. SAL-020 Replicon: chromosome
Accession: NZ_CP071690 Location: 2649911..2715508 Organism: Salmonella sp. SAL-020 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1G48_RS12865 () | 2645181..2647229 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| J1G48_RS12870 () | 2647249..2647935 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| J1G48_RS12875 () | 2648033..2648530 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| J1G48_RS12880 () | 2648659..2649942 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| J1G48_RS12885 () | 2649911..2652544 | + | 2634 | WP_001529852.1 | hypothetical protein | VF |
| J1G48_RS12890 () | 2652622..2654061 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| J1G48_RS12895 () | 2654179..2654415 | + | 237 | WP_024131108.1 | DUF1480 family protein | - |
| J1G48_RS12900 () | 2654526..2654717 | + | 192 | WP_000457838.1 | YebW family protein | - |
| J1G48_RS12905 () | 2654736..2655386 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| J1G48_RS12910 () | 2655610..2655774 | - | 165 | WP_001134856.1 | membrane protein | - |
| J1G48_RS12915 () | 2656059..2656781 | - | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| J1G48_RS12920 () | 2657465..2657860 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| J1G48_RS12925 () | 2658190..2658666 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| J1G48_RS12930 () | 2659039..2659458 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| J1G48_RS12935 () | 2659831..2660100 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| J1G48_RS12940 () | 2660266..2660406 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| J1G48_RS12945 () | 2660552..2661759 | - | 1208 | Protein_2532 | IS256 family transposase ISEc39 | Transposase |
| J1G48_RS12950 () | 2661829..2662295 | + | 467 | Protein_2533 | tyrosine-type recombinase/integrase | - |
| J1G48_RS12955 () | 2663545..2664459 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| J1G48_RS12960 () | 2664592..2664750 | + | 159 | WP_000480735.1 | hypothetical protein | - |
| J1G48_RS12965 () | 2664760..2665374 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| J1G48_RS12970 () | 2665701..2665847 | - | 147 | Protein_2537 | helix-turn-helix domain-containing protein | - |
| J1G48_RS12975 () | 2665862..2666008 | + | 147 | WP_000951652.1 | hypothetical protein | - |
| J1G48_RS12980 () | 2666509..2666634 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| J1G48_RS12985 () | 2667204..2667404 | + | 201 | WP_012543349.1 | phage virulence factor PagK family protein | - |
| J1G48_RS12990 () | 2667501..2668381 | - | 881 | Protein_2541 | tail fiber assembly protein | - |
| J1G48_RS12995 () | 2668568..2669553 | - | 986 | Protein_2542 | tail fiber protein | - |
| J1G48_RS13000 () | 2669552..2670119 | - | 568 | Protein_2543 | phage terminase large subunit family protein | - |
| J1G48_RS13005 () | 2670106..2670597 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| J1G48_RS13010 () | 2670652..2670840 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| J1G48_RS13015 () | 2670905..2671072 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| J1G48_RS13020 () | 2671329..2671862 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| J1G48_RS13025 () | 2671916..2672107 | - | 192 | Protein_2548 | glycoside hydrolase family 19 protein | - |
| J1G48_RS13030 () | 2672096..2672821 | + | 726 | Protein_2549 | exonuclease VIII | - |
| J1G48_RS13035 () | 2672821..2673743 | + | 923 | Protein_2550 | hypothetical protein ; Integrase | Integrase |
| J1G48_RS13040 () | 2674688..2675488 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| J1G48_RS13045 () | 2675517..2675758 | - | 242 | Protein_2552 | helix-turn-helix domain-containing protein | - |
| J1G48_RS13050 () | 2675968..2676690 | + | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| J1G48_RS13055 () | 2676892..2677236 | - | 345 | Protein_2554 | tail fiber assembly protein | - |
| J1G48_RS13060 () | 2677241..2678104 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| J1G48_RS13065 () | 2678100..2680475 | - | 2376 | Protein_2556 | host specificity protein J | - |
| J1G48_RS13070 () | 2680475..2680735 | - | 261 | Protein_2557 | Mov34/MPN/PAD-1 family protein | - |
| J1G48_RS13075 () | 2680745..2681440 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| J1G48_RS13080 () | 2681530..2682063 | + | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| J1G48_RS13085 () | 2682180..2682440 | - | 261 | Protein_2560 | porin family protein | - |
| J1G48_RS13090 () | 2682439..2682750 | - | 312 | Protein_2561 | DUF1441 family protein | - |
| J1G48_RS13095 () | 2682958..2683437 | - | 480 | WP_001541990.1 | lysis protein | - |
| J1G48_RS13100 () | 2683455..2683907 | - | 453 | WP_000984586.1 | lysozyme | - |
| J1G48_RS13105 () | 2683891..2684220 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| J1G48_RS13110 () | 2684496..2685182 | + | 687 | WP_001574215.1 | PipA/GogA/GtgA family type III secretion system effector | - |
| J1G48_RS13115 () | 2685543..2685992 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| J1G48_RS13120 () | 2686366..2686890 | - | 525 | WP_001574213.1 | hypothetical protein | - |
| J1G48_RS13125 () | 2686987..2687676 | - | 690 | WP_001097218.1 | antitermination protein | - |
| J1G48_RS13130 () | 2687673..2687809 | - | 137 | Protein_2569 | YlcG family protein | - |
| J1G48_RS13135 () | 2687806..2688033 | - | 228 | WP_000784710.1 | recombination protein NinG | - |
| J1G48_RS13140 () | 2688030..2688629 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| J1G48_RS13145 () | 2688693..2688941 | - | 249 | WP_000911593.1 | hypothetical protein | - |
| J1G48_RS13150 () | 2689213..2689365 | - | 153 | WP_000248679.1 | hypothetical protein | - |
| J1G48_RS13155 () | 2689630..2691609 | - | 1980 | WP_001237395.1 | MBL fold metallo-hydrolase | - |
| J1G48_RS13160 () | 2692023..2692301 | + | 279 | WP_001575998.1 | excisionase | - |
| J1G48_RS13165 () | 2692276..2693355 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2693493..2693638 | + | 146 | - | - | Antitoxin Detail |
| - () | 2693495..2693598 | - | 104 | - | - | Toxin Detail |
| J1G48_RS13170 () | 2693738..2694091 | - | 354 | WP_000722370.1 | YebY family protein | - |
| J1G48_RS13175 () | 2694108..2694983 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| J1G48_RS13180 () | 2694984..2695358 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| J1G48_RS13185 () | 2695496..2695726 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| J1G48_RS13190 () | 2695834..2696490 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| J1G48_RS13195 () | 2696514..2697212 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| J1G48_RS13200 () | 2697249..2699300 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| J1G48_RS13205 () | 2699513..2700172 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| J1G48_RS13210 () | 2700266..2700619 | - | 354 | WP_001042123.1 | hypothetical protein | - |
| J1G48_RS13215 () | 2700687..2700977 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| J1G48_RS13220 () | 2701108..2702286 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| J1G48_RS13225 () | 2702386..2703027 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| J1G48_RS13230 () | 2703065..2704876 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| J1G48_RS13235 () | 2705111..2706586 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| J1G48_RS13240 () | 2706928..2707797 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| J1G48_RS13245 () | 2707921..2709363 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| J1G48_RS13250 () | 2709436..2710407 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| J1G48_RS13255 () | 2710524..2711843 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| J1G48_RS13260 () | 2711859..2712803 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| J1G48_RS13265 () | 2712882..2713637 | + | 756 | WP_000203023.1 | Zinc import ATP-binding protein ZnuC | VF |
| J1G48_RS13270 () | 2713634..2714419 | + | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| J1G48_RS13275 () | 2714498..2715508 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| J1G48_RS13280 () | 2715517..2716128 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| J1G48_RS13285 () | 2716488..2717180 | - | 693 | WP_001680382.1 | hypothetical protein | - |
| J1G48_RS13290 () | 2717389..2717988 | + | 600 | WP_000716756.1 | YebB family permuted papain-like enzyme | - |
| J1G48_RS13295 () | 2717990..2718511 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| J1G48_RS13300 () | 2718548..2719288 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| J1G48_RS13305 () | 2719318..2719770 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|