MGE detailed information
MGE type: Mobilizable plasmid MGE length: 124087 bp
Accession: NZ_CP070953 Location: 1..124087 Organism: Escherichia fergusonii strain EF31 Replicon: plasmid pTB31P2
Accession: NZ_CP070953 Location: 1..124087 Organism: Escherichia fergusonii strain EF31 Replicon: plasmid pTB31P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JW961_RS22445 (JW961_22340) | 993..1715 | + | 723 | WP_000017204.1 | helix-turn-helix domain-containing protein | - |
| JW961_RS22450 (JW961_22345) | 1965..4160 | - | 2196 | Protein_2 | N-6 DNA methylase | - |
| JW961_RS22455 (JW961_22350) | 4236..5945 | + | 1710 | WP_223663909.1 | phage portal protein | - |
| JW961_RS22460 (JW961_22355) | 5938..6957 | + | 1020 | WP_105076676.1 | head processing protein | - |
| JW961_RS22465 (JW961_22360) | 7249..7806 | - | 558 | WP_001345478.1 | lysozyme | - |
| JW961_RS22470 (JW961_22365) | 7975..8463 | + | 489 | WP_000068864.1 | single-stranded DNA-binding protein | - |
| JW961_RS22475 (JW961_22370) | 8852..9964 | - | 1113 | WP_095157391.1 | porin OmpC | - |
| JW961_RS22480 (JW961_22375) | 10626..10943 | - | 318 | Protein_8 | phage tail protein | - |
| JW961_RS22485 (JW961_22380) | 10933..13383 | - | 2451 | Protein_9 | lytic transglycosylase domain-containing protein | - |
| JW961_RS22490 (JW961_22385) | 13465..14346 | - | 882 | WP_095157389.1 | morphogenetic protein | - |
| JW961_RS22495 (JW961_22390) | 14361..14972 | - | 612 | WP_000523978.1 | hypothetical protein | - |
| JW961_RS22500 (JW961_22395) | 14983..15549 | - | 567 | WP_000188924.1 | hypothetical protein | - |
| JW961_RS22510 (JW961_22405) | 16561..16722 | + | 162 | WP_224223469.1 | AraC family transcriptional regulator | - |
| JW961_RS22515 (JW961_22410) | 16761..17009 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| JW961_RS22520 (JW961_22415) | 17006..17446 | - | 441 | WP_023352064.1 | hypothetical protein | - |
| JW961_RS22525 (JW961_22420) | 17480..21448 | - | 3969 | Protein_17 | helicase-related protein | - |
| JW961_RS22530 (JW961_22425) | 22031..22282 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JW961_RS22535 (JW961_22430) | 22279..22566 | + | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JW961_RS22540 | 22934..23047 | - | 114 | Protein_20 | alkaline phosphatase | - |
| JW961_RS22545 (JW961_22440) | 23046..23251 | + | 206 | Protein_21 | hypothetical protein | - |
| JW961_RS22550 (JW961_22445) | 23426..26977 | - | 3552 | WP_223663921.1 | Outer membrane protein IcsA autotransporter | VF |
| JW961_RS22555 (JW961_22450) | 27562..27780 | - | 219 | Protein_23 | IS91 family transposase ISEc37 | Transposase |
| JW961_RS22560 (JW961_22455) | 27828..28734 | + | 907 | Protein_24 | IS3 family transposase ISEc52 | Transposase |
| JW961_RS22565 (JW961_22460) | 28727..29158 | - | 432 | Protein_25 | IncHI-type conjugal transfer protein TrhH | - |
| JW961_RS22570 | 29148..29426 | - | 279 | WP_223663905.1 | hypothetical protein | - |
| JW961_RS22575 (JW961_22465) | 29514..30194 | - | 681 | WP_223663904.1 | conjugal transfer protein TraF | - |
| JW961_RS22580 (JW961_22470) | 30981..31319 | - | 339 | WP_223663903.1 | hypothetical protein | - |
| JW961_RS22585 (JW961_22475) | 31322..31852 | - | 531 | WP_223663902.1 | hypothetical protein | - |
| JW961_RS22590 (JW961_22480) | 32878..33363 | + | 486 | WP_000071636.1 | conjugative transfer protein MobI(A/C) | - |
| JW961_RS22595 (JW961_22485) | 33360..34082 | + | 723 | WP_095530615.1 | hypothetical protein | - |
| JW961_RS22600 (JW961_22490) | 34093..35532 | + | 1440 | WP_223663901.1 | hypothetical protein | Relaxase |
| JW961_RS22610 (JW961_22500) | 36257..36685 | - | 429 | WP_223663913.1 | hypothetical protein | - |
| JW961_RS22615 (JW961_22505) | 36760..37257 | - | 498 | WP_131669192.1 | hypothetical protein | - |
| JW961_RS22620 (JW961_22510) | 37647..38663 | - | 1017 | WP_223663915.1 | hypothetical protein | - |
| JW961_RS22625 (JW961_22515) | 38819..39286 | - | 468 | WP_222698525.1 | DUF1643 domain-containing protein | - |
| JW961_RS22630 (JW961_22520) | 39478..40038 | + | 561 | WP_001549652.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JW961_RS22635 (JW961_22525) | 40439..40936 | - | 498 | WP_000148192.1 | hypothetical protein | - |
| JW961_RS22640 (JW961_22530) | 41194..41891 | + | 698 | WP_224223463.1 | IS1 family transposase IS1X2 | Transposase |
| JW961_RS22645 (JW961_22535) | 42034..42498 | + | 465 | WP_001352013.1 | helix-turn-helix transcriptional regulator | - |
| JW961_RS22650 (JW961_22540) | 42668..43546 | + | 879 | WP_224223471.1 | hypothetical protein | - |
| JW961_RS22660 (JW961_22550) | 44799..46017 | - | 1219 | Protein_44 | IS3 family transposase | - |
| JW961_RS22665 (JW961_22555) | 46415..46570 | + | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| JW961_RS22670 (JW961_22560) | 46764..47876 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| JW961_RS22675 (JW961_22565) | 48036..48545 | - | 510 | WP_000509940.1 | hypothetical protein | - |
| JW961_RS22680 (JW961_22570) | 48557..49138 | - | 582 | WP_000035250.1 | hypothetical protein | - |
| JW961_RS22685 (JW961_22575) | 49174..49989 | - | 816 | WP_000041769.1 | hypothetical protein | - |
| JW961_RS22690 (JW961_22580) | 49999..51588 | - | 1590 | WP_223663898.1 | hypothetical protein | - |
| JW961_RS22695 (JW961_22585) | 51648..53354 | - | 1707 | WP_223663896.1 | hypothetical protein | - |
| JW961_RS22700 (JW961_22590) | 53580..54581 | - | 1002 | WP_000038866.1 | ParB family protein | - |
| JW961_RS22705 (JW961_22595) | 54598..55794 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| JW961_RS22710 (JW961_22600) | 55963..56772 | - | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| JW961_RS22715 (JW961_22605) | 57065..57949 | - | 885 | WP_223663894.1 | RepB family plasmid replication initiator protein | - |
| JW961_RS22720 (JW961_22610) | 58350..58676 | - | 327 | WP_223663892.1 | hypothetical protein | - |
| JW961_RS22725 (JW961_22615) | 58854..59276 | - | 423 | WP_000007772.1 | hypothetical protein | - |
| JW961_RS22730 (JW961_22620) | 59316..60104 | - | 789 | WP_095530532.1 | hypothetical protein | - |
| JW961_RS22735 (JW961_22625) | 60567..60851 | + | 285 | WP_001177860.1 | hypothetical protein | - |
| JW961_RS22740 (JW961_22630) | 60844..61748 | + | 905 | Protein_60 | recombination-associated protein RdgC | - |
| JW961_RS22745 (JW961_22635) | 61745..62295 | + | 551 | Protein_61 | Hint domain-containing protein | - |
| JW961_RS22755 (JW961_22645) | 63057..63260 | + | 204 | WP_072796178.1 | tautomerase PptA | - |
| JW961_RS22760 (JW961_22650) | 63264..63833 | - | 570 | WP_095530468.1 | flavin reductase family protein | - |
| JW961_RS22765 (JW961_22655) | 64008..64853 | + | 846 | WP_095530467.1 | N-hydroxyarylamine O-acetyltransferase | - |
| JW961_RS22770 (JW961_22660) | 64949..65842 | - | 894 | WP_000804358.1 | putative isomerase YddE | VF |
| JW961_RS22775 (JW961_22665) | 65922..66602 | - | 681 | WP_000617115.1 | respiratory nitrate reductase subunit gamma | - |
| JW961_RS22780 (JW961_22670) | 66599..67294 | - | 696 | WP_072649765.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| JW961_RS22785 (JW961_22675) | 67294..68838 | - | 1545 | WP_000702558.1 | nitrate reductase subunit beta | - |
| JW961_RS22790 (JW961_22680) | 68835..72575 | - | 3741 | WP_072649764.1 | nitrate reductase Z subunit alpha | - |
| JW961_RS22795 (JW961_22685) | 72670..74058 | - | 1389 | WP_001207923.1 | nitrate/nitrite transporter NarU | - |
| JW961_RS22800 (JW961_22690) | 74321..75301 | + | 981 | WP_129753561.1 | IS5 family transposase ISKpn26 | Transposase |
| JW961_RS22805 (JW961_22695) | 75449..75730 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JW961_RS22810 (JW961_22700) | 75720..75971 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| JW961_RS22815 (JW961_22705) | 77131..78099 | + | 969 | WP_208461125.1 | IS5 family transposase IS903B | Transposase |
| JW961_RS22820 (JW961_22710) | 78259..78402 | + | 144 | WP_152930453.1 | hypothetical protein | - |
| JW961_RS22825 (JW961_22715) | 78463..78708 | + | 246 | Protein_77 | IS3 family transposase ISEhe3 | Transposase |
| JW961_RS22830 (JW961_22720) | 78776..79928 | + | 1153 | Protein_78 | IS30 family transposase IS30D | Transposase |
| JW961_RS22835 (JW961_22725) | 79941..80198 | - | 258 | Protein_79 | IS3 family transposase ISEc52 | Transposase |
| JW961_RS22840 (JW961_22730) | 80273..80584 | + | 312 | Protein_80 | VRR-NUC domain-containing protein | - |
| JW961_RS22845 (JW961_22735) | 80651..80806 | + | 156 | WP_032236586.1 | hypothetical protein | - |
| JW961_RS22850 (JW961_22740) | 81308..81934 | + | 627 | WP_000484112.1 | hypothetical protein | - |
| JW961_RS22855 (JW961_22745) | 81931..82608 | + | 678 | Protein_83 | metallophosphoesterase | - |
| JW961_RS22860 (JW961_22750) | 82605..83306 | + | 702 | WP_059039678.1 | hypothetical protein | - |
| JW961_RS22865 (JW961_22755) | 83608..84870 | + | 1263 | WP_059039676.1 | hypothetical protein | - |
| JW961_RS22870 (JW961_22760) | 84943..85449 | + | 507 | WP_025210458.1 | hypothetical protein | - |
| JW961_RS22875 (JW961_22765) | 85607..86575 | - | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| JW961_RS23150 | 86593..86718 | - | 126 | WP_258766984.1 | hypothetical protein | - |
| JW961_RS22880 (JW961_22770) | 86780..89896 | - | 3117 | WP_130526381.1 | HsdR family type I site-specific deoxyribonuclease | - |
| JW961_RS22885 (JW961_22775) | 90018..90632 | - | 615 | WP_072844330.1 | restriction endonuclease subunit S | - |
| JW961_RS22890 (JW961_22780) | 90629..92185 | - | 1557 | WP_130526380.1 | type I restriction-modification system subunit M | - |
| JW961_RS22895 (JW961_22785) | 92368..92589 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JW961_RS22900 (JW961_22790) | 92589..92969 | + | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| JW961_RS22905 (JW961_22795) | 92974..93153 | + | 180 | WP_024262170.1 | hypothetical protein | - |
| JW961_RS22910 (JW961_22800) | 93181..94224 | + | 1044 | WP_072649708.1 | DUF968 domain-containing protein | - |
| JW961_RS22920 (JW961_22810) | 95608..95931 | - | 324 | WP_001175593.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JW961_RS22925 (JW961_22815) | 96037..97171 | + | 1135 | Protein_98 | permease | - |
| JW961_RS22930 (JW961_22820) | 97299..97703 | - | 405 | Protein_99 | recombinase family protein | - |
| JW961_RS22935 (JW961_22825) | 97871..98419 | + | 549 | Protein_100 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| JW961_RS22940 (JW961_22830) | 98453..100205 | - | 1753 | Protein_101 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JW961_RS22945 (JW961_22835) | 100200..100600 | + | 401 | Protein_102 | isochorismatase family protein | - |
| JW961_RS22950 (JW961_22840) | 100738..101622 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| JW961_RS22955 (JW961_22845) | 101654..102853 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| JW961_RS22960 (JW961_22850) | 102959..103609 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| JW961_RS22965 (JW961_22855) | 103641..103883 | - | 243 | WP_000844627.1 | transposase | - |
| JW961_RS22970 (JW961_22860) | 103941..105455 | - | 1515 | Protein_107 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JW961_RS22975 (JW961_22865) | 105521..106225 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JW961_RS22980 (JW961_22870) | 106277..107077 | + | 801 | Protein_109 | Tn3 family transposase TnpA_IS3000 | Transposase |
| JW961_RS22985 (JW961_22875) | 107179..107640 | + | 462 | WP_196451626.1 | DMT family transporter | - |
| JW961_RS22990 (JW961_22880) | 107642..107815 | + | 174 | Protein_111 | IS6 family transposase IS6100 | Transposase |
| JW961_RS22995 (JW961_22885) | 107863..108324 | + | 462 | Protein_112 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| JW961_RS23000 (JW961_22890) | 108381..109085 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JW961_RS23005 (JW961_22895) | 109151..109954 | + | 804 | Protein_114 | Methyl-accepting chemotaxis protein McpQ | VF |
| JW961_RS23010 (JW961_22900) | 110143..112587 | + | 2445 | Protein_115 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| JW961_RS23015 (JW961_22905) | 112637..112894 | + | 258 | WP_223663936.1 | hypothetical protein | - |
| JW961_RS23020 (JW961_22910) | 112980..114173 | + | 1194 | WP_064186818.1 | hypothetical protein | - |
| JW961_RS23025 | 114173..115657 | + | 1485 | WP_223663934.1 | terminase | - |
| JW961_RS23030 (JW961_22915) | 115642..116043 | + | 402 | WP_223663931.1 | phage antirepressor KilAC domain-containing protein | - |
| JW961_RS23035 (JW961_22920) | 116076..116927 | - | 852 | WP_000611664.1 | phage repressor protein C1 | - |
| JW961_RS23040 (JW961_22925) | 117038..117247 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| JW961_RS23045 (JW961_22930) | 117418..118115 | + | 698 | WP_103215986.1 | IS1 family transposase IS1S | Transposase |
| JW961_RS23050 (JW961_22935) | 118132..118947 | + | 816 | Protein_123 | IS5 family transposase ISKpn26 | Transposase |
| JW961_RS23055 (JW961_22940) | 119576..119797 | + | 222 | WP_000542336.1 | hypothetical protein | - |
| JW961_RS23060 (JW961_22945) | 119805..120836 | + | 1032 | WP_029393497.1 | site-specific integrase | - |
| JW961_RS23065 (JW961_22950) | 120988..121197 | + | 210 | WP_077249223.1 | lysogeny establishment protein | - |
| JW961_RS23070 (JW961_22955) | 121445..122005 | + | 561 | WP_039021622.1 | Ref family protein | - |
| JW961_RS23075 (JW961_22960) | 122084..122839 | + | 756 | WP_223663823.1 | hypothetical protein | - |
| JW961_RS23080 (JW961_22965) | 122893..123582 | - | 690 | WP_105318591.1 | EAL domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|