MGE detailed information
MGE type: Genomic_island MGE length: 23818 bp
Accession: NZ_CP070920 Location: 4299186..4323003 Organism: Escherichia coli strain 40EC Replicon: chromosome
Accession: NZ_CP070920 Location: 4299186..4323003 Organism: Escherichia coli strain 40EC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR909_RS20855 () | 4295856..4297313 | + | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| JR909_RS20860 () | 4297550..4299067 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| JR909_RS20865 () | 4299186..4299359 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JR909_RS20870 () | 4299387..4299683 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JR909_RS20875 () | 4299910..4300182 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JR909_RS20880 () | 4300395..4304324 | - | 3930 | WP_001542592.1 | Serine protease EspC | VF |
| JR909_RS20885 () | 4305485..4306315 | - | 831 | WP_001088100.1 | AraC family transcriptional regulator | - |
| JR909_RS20890 () | 4307222..4311058 | - | 3837 | WP_001542590.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| JR909_RS20895 () | 4311408..4311941 | + | 534 | WP_000733565.1 | hypothetical protein | VF |
| JR909_RS20900 () | 4312010..4314367 | + | 2358 | WP_205899238.1 | Outer membrane usher protein YraJ | VF |
| JR909_RS20905 () | 4314360..4315061 | + | 702 | WP_000162908.1 | Chaperone protein FaeE | VF |
| JR909_RS20910 () | 4315081..4316076 | + | 996 | WP_001395679.1 | hypothetical protein | - |
| JR909_RS20915 () | 4316174..4316611 | + | 438 | WP_100224274.1 | hypothetical protein | VF |
| JR909_RS20920 () | 4316604..4317122 | + | 519 | WP_000565927.1 | hypothetical protein | - |
| JR909_RS20925 () | 4317202..4317318 | + | 117 | Protein_4094 | IS3 family transposase ISKpn1 | Transposase |
| JR909_RS20930 () | 4317778..4318008 | + | 231 | WP_089562688.1 | IS3 family transposase | - |
| JR909_RS20935 () | 4318060..4320222 | - | 2163 | WP_001542587.1 | peptidase domain-containing ABC transporter | - |
| JR909_RS20940 () | 4320215..4321435 | - | 1221 | WP_001150579.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| JR909_RS20945 () | 4321474..4322046 | - | 573 | WP_000661408.1 | hypothetical protein | - |
| JR909_RS20950 () | 4322449..4323200 | + | 752 | Protein_4099 | IS3 family transposase | - |
| JR909_RS20955 () | 4323329..4324960 | + | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| JR909_RS20960 () | 4324957..4325676 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| JR909_RS20965 () | 4326247..4327587 | + | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|