MGE detailed information
MGE type: Prophage MGE length: 49565 bp
Accession: NZ_CP070480 Location: 1051161..1100725 Organism: Rothia sp. ZJ932 Replicon: chromosome
Accession: NZ_CP070480 Location: 1051161..1100725 Organism: Rothia sp. ZJ932 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR346_RS04835 () | 1046618..1049989 | + | 3372 | WP_205483674.1 | Rne/Rng family ribonuclease | - |
| JR346_RS04840 () | 1050336..1050647 | + | 312 | WP_204875678.1 | 50S ribosomal protein L21 | - |
| JR346_RS04845 () | 1050699..1050956 | + | 258 | WP_204875680.1 | 50S ribosomal protein L27 | - |
| JR346_RS04850 () | 1051161..1052720 | + | 1560 | WP_204875682.1 | GTPase ObgE | - |
| JR346_RS04855 () | 1052889..1054004 | + | 1116 | WP_205483881.1 | glutamate 5-kinase | - |
| JR346_RS04860 () | 1054073..1055362 | + | 1290 | WP_205483676.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JR346_RS04865 () | 1055566..1055814 | + | 249 | WP_204875686.1 | hypothetical protein | - |
| JR346_RS04870 () | 1055986..1056609 | + | 624 | WP_205483883.1 | nicotinate-nucleotide adenylyltransferase | - |
| JR346_RS04875 () | 1056761..1057825 | + | 1065 | WP_205483678.1 | hypothetical protein | - |
| JR346_RS04880 () | 1057886..1058335 | + | 450 | WP_205483680.1 | ribosome silencing factor | - |
| JR346_RS04890 () | 1058814..1059164 | + | 351 | WP_205483682.1 | DUF2200 family protein | - |
| JR346_RS04895 () | 1059460..1060659 | + | 1200 | WP_205483684.1 | methyltransferase | - |
| JR346_RS04900 () | 1060760..1061137 | - | 378 | WP_205483686.1 | DoxX family membrane protein | - |
| JR346_RS04905 () | 1061431..1063182 | + | 1752 | WP_205483689.1 | hypothetical protein | - |
| JR346_RS04910 () | 1063374..1063652 | - | 279 | WP_205483691.1 | hypothetical protein | - |
| JR346_RS04915 () | 1063721..1064152 | + | 432 | WP_205483693.1 | hypothetical protein | - |
| JR346_RS04920 () | 1064231..1065301 | + | 1071 | WP_205483695.1 | DUF2183 domain-containing protein | - |
| JR346_RS04925 () | 1065966..1066190 | + | 225 | WP_204875719.1 | glutaredoxin-like protein NrdH | - |
| JR346_RS04930 () | 1066349..1066768 | + | 420 | WP_204876577.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| JR346_RS04935 () | 1066726..1068906 | + | 2181 | WP_205483697.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| JR346_RS04940 () | 1069098..1069586 | + | 489 | WP_205483699.1 | MarR family transcriptional regulator | - |
| JR346_RS04945 () | 1069710..1070684 | + | 975 | WP_204876578.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| JR346_RS04950 () | 1070983..1071849 | + | 867 | WP_205483701.1 | GNAT family N-acetyltransferase | - |
| JR346_RS04955 () | 1071846..1072535 | + | 690 | WP_205483703.1 | lipoate--protein ligase family protein | - |
| JR346_RS04960 () | 1072536..1073453 | + | 918 | WP_205483705.1 | SOS response-associated peptidase family protein | - |
| JR346_RS04965 () | 1073557..1074066 | - | 510 | WP_204875729.1 | GNAT family N-acetyltransferase | - |
| JR346_RS04970 () | 1074236..1075081 | + | 846 | WP_205483707.1 | fumarylacetoacetate hydrolase family protein | - |
| JR346_RS04975 () | 1075398..1075550 | - | 153 | Protein_959 | zinc transporter permease | - |
| JR346_RS04980 () | 1075547..1075858 | - | 312 | WP_204875733.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JR346_RS04985 () | 1076009..1076593 | + | 585 | WP_205483709.1 | GntR family transcriptional regulator | - |
| JR346_RS04990 () | 1076792..1078819 | + | 2028 | WP_205483711.1 | threonine--tRNA ligase | - |
| JR346_RS04995 () | 1078968..1080752 | + | 1785 | WP_205483713.1 | RNA-directed DNA polymerase | - |
| JR346_RS05000 () | 1081756..1082073 | + | 318 | WP_205482312.1 | IS3 family transposase ISMsm1 | Transposase |
| JR346_RS05005 () | 1082070..1082990 | + | 921 | WP_205483715.1 | IS3 family transposase IS3501 | Transposase |
| JR346_RS05010 () | 1083176..1083583 | - | 408 | WP_205483885.1 | transposase family protein | - |
| JR346_RS05015 () | 1083666..1083872 | + | 207 | WP_205483887.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| JR346_RS05020 () | 1083882..1084124 | + | 243 | WP_205483717.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| JR346_RS05025 () | 1084199..1085497 | + | 1299 | WP_205483719.1 | carboxylesterase family protein | - |
| JR346_RS05030 () | 1085669..1086753 | + | 1085 | Protein_970 | NADH:flavin oxidoreductase/NADH oxidase | - |
| JR346_RS05035 () | 1087196..1087651 | + | 456 | WP_205483721.1 | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH | - |
| JR346_RS05040 () | 1087696..1088265 | + | 570 | WP_204875753.1 | HIT domain-containing protein | - |
| JR346_RS05045 () | 1088269..1089267 | - | 999 | WP_205483723.1 | hypothetical protein | - |
| JR346_RS05050 () | 1089371..1090657 | + | 1287 | WP_205483889.1 | DUF1727 domain-containing protein | - |
| JR346_RS05055 () | 1090658..1091386 | + | 729 | WP_205483725.1 | glutamine amidotransferase | - |
| JR346_RS05060 () | 1091461..1092219 | + | 759 | WP_205483727.1 | hypothetical protein | VF |
| JR346_RS05065 () | 1092270..1092926 | + | 657 | WP_205483891.1 | crossover junction endodeoxyribonuclease RuvC | - |
| JR346_RS05070 () | 1093015..1093641 | + | 627 | WP_205483729.1 | Holliday junction branch migration protein RuvA | - |
| JR346_RS05075 () | 1093678..1094709 | + | 1032 | WP_205483731.1 | Holliday junction branch migration DNA helicase RuvB | - |
| JR346_RS05080 () | 1094846..1095253 | + | 408 | WP_205483733.1 | preprotein translocase subunit YajC | - |
| JR346_RS05085 () | 1095338..1097035 | + | 1698 | WP_205483735.1 | protein translocase subunit SecD | - |
| JR346_RS05090 () | 1097025..1098092 | + | 1068 | WP_205483737.1 | protein translocase subunit SecF | - |
| JR346_RS05095 () | 1098428..1100725 | + | 2298 | WP_205483893.1 | hypothetical protein | VF |
| JR346_RS05100 () | 1100860..1101606 | - | 747 | WP_205483739.1 | hypothetical protein | - |
| JR346_RS05105 () | 1101716..1102999 | - | 1284 | WP_204875772.1 | DUF349 domain-containing protein | - |
| JR346_RS05110 () | 1103370..1104719 | + | 1350 | WP_204875773.1 | histidine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|