MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP070115 Location: 424311..444665 Organism: Escherichia coli strain FDAARGOS_1298 Replicon: chromosome
Accession: NZ_CP070115 Location: 424311..444665 Organism: Escherichia coli strain FDAARGOS_1298 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K28_RS02080 (419676) | 419676..420134 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| I6K28_RS02085 (420395) | 420395..421852 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| I6K28_RS02090 (421909) | 421909..422523 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| I6K28_RS02095 (422520) | 422520..423659 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| I6K28_RS02100 (423849) | 423849..424301 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| I6K28_RS02105 (424311) | 424311..424709 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| I6K28_RS02110 (424712) | 424712..425005 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| I6K28_RS02115 (425057) | 425057..426112 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| I6K28_RS02120 (426183) | 426183..426968 | - | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| I6K28_RS02125 (426940) | 426940..428652 | + | 1713 | Protein_422 | Flagellar biosynthesis protein FlhA | VF |
| I6K28_RS02130 (428731) | 428731..428889 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| I6K28_RS02135 (428972) | 428972..429469 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| I6K28_RS02140 (429645) | 429645..430394 | - | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| I6K28_RS02145 (430706) | 430706..431446 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| I6K28_RS02150 (431417) | 431417..432184 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| I6K28_RS02155 (432389) | 432389..432967 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| I6K28_RS02160 (433207) | 433207..435651 | + | 2445 | WP_050019165.1 | Acyl-coenzyme A dehydrogenase | VF |
| I6K28_RS02165 (435694) | 435694..436140 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| I6K28_RS02170 (436321) | 436321..437091 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| I6K28_RS02175 (437142) | 437142..437336 | - | 195 | Protein_432 | ISAs1 family transposase | - |
| I6K28_RS02180 (437362) | 437362..437874 | - | 513 | WP_001331864.1 | integrating conjugative element protein | - |
| I6K28_RS02185 (437944) | 437944..438447 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| I6K28_RS02190 (438676) | 438676..439440 | - | 765 | Protein_435 | ISAs1 family transposase ISEc1 | Transposase |
| I6K28_RS02195 (439698) | 439698..439988 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| I6K28_RS02200 (439963) | 439963..441402 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| I6K28_RS02205 (441395) | 441395..442441 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| I6K28_RS02210 (442548) | 442548..444530 | - | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| I6K28_RS02215 (444751) | 444751..445269 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| I6K28_RS02220 (445975) | 445975..446478 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| I6K28_RS02225 (446501) | 446501..447985 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| I6K28_RS02230 (447990) | 447990..448415 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|