MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP069978 Location: 2657154..2677508 Organism: Escherichia coli strain FDAARGOS_1299 Replicon: chromosome
Accession: NZ_CP069978 Location: 2657154..2677508 Organism: Escherichia coli strain FDAARGOS_1299 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K29_RS12930 (2652519) | 2652519..2652977 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| I6K29_RS12935 (2653238) | 2653238..2654695 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| I6K29_RS12940 (2654752) | 2654752..2655366 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| I6K29_RS12945 (2655363) | 2655363..2656502 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| I6K29_RS12950 (2656692) | 2656692..2657144 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| I6K29_RS12955 (2657154) | 2657154..2657552 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| I6K29_RS12960 (2657555) | 2657555..2657848 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| I6K29_RS12965 (2657900) | 2657900..2658955 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| I6K29_RS12970 (2659026) | 2659026..2659811 | - | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| I6K29_RS12975 (2659783) | 2659783..2661495 | + | 1713 | Protein_2565 | Flagellar biosynthesis protein FlhA | VF |
| I6K29_RS12980 (2661574) | 2661574..2661732 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| I6K29_RS12985 (2661815) | 2661815..2662312 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| I6K29_RS12990 (2662488) | 2662488..2663237 | - | 750 | WP_000093936.1 | Murein DD-endopeptidase MepH | VF |
| I6K29_RS12995 (2663549) | 2663549..2664289 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| I6K29_RS13000 (2664260) | 2664260..2665027 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| I6K29_RS13005 (2665232) | 2665232..2665810 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| I6K29_RS13010 (2666050) | 2666050..2668494 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| I6K29_RS13015 (2668537) | 2668537..2668983 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| I6K29_RS13020 (2669164) | 2669164..2669934 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| I6K29_RS13025 (2669985) | 2669985..2670179 | - | 195 | Protein_2575 | ISAs1 family transposase | - |
| I6K29_RS13030 (2670205) | 2670205..2670693 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| I6K29_RS13035 (2670787) | 2670787..2671290 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| I6K29_RS13040 (2671519) | 2671519..2672283 | - | 765 | Protein_2578 | ISAs1 family transposase ISEc1 | Transposase |
| I6K29_RS13045 (2672541) | 2672541..2672831 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| I6K29_RS13050 (2672806) | 2672806..2674245 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| I6K29_RS13055 (2674238) | 2674238..2675284 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| I6K29_RS13060 (2675391) | 2675391..2677373 | - | 1983 | WP_000053636.1 | Cation-transporting P-type ATPase B | VF |
| I6K29_RS13065 (2677594) | 2677594..2678112 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| I6K29_RS13070 (2678818) | 2678818..2679321 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| I6K29_RS13075 (2679344) | 2679344..2680828 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| I6K29_RS13080 (2680833) | 2680833..2681258 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|