MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NZ_CP069890 Location: 2956988..2977669 Organism: Escherichia coli strain FDAARGOS_1295 Replicon: chromosome
Accession: NZ_CP069890 Location: 2956988..2977669 Organism: Escherichia coli strain FDAARGOS_1295 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K25_RS14095 (2953103) | 2953103..2953528 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| I6K25_RS14100 (2953533) | 2953533..2955017 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| I6K25_RS14105 (2955040) | 2955040..2955543 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| I6K25_RS14110 (2956249) | 2956249..2956767 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| I6K25_RS14115 (2956988) | 2956988..2958970 | + | 1983 | WP_000053636.1 | hypothetical protein | VF |
| I6K25_RS14120 (2959077) | 2959077..2960123 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| I6K25_RS14125 (2960116) | 2960116..2961555 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| I6K25_RS14130 (2961530) | 2961530..2961820 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| I6K25_RS14135 (2962078) | 2962078..2962842 | + | 765 | Protein_2774 | ISAs1 family transposase ISEc1 | Transposase |
| I6K25_RS14140 (2963071) | 2963071..2963574 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| I6K25_RS14145 (2963668) | 2963668..2964156 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| I6K25_RS14150 (2964182) | 2964182..2964376 | + | 195 | Protein_2777 | ISAs1 family transposase | - |
| I6K25_RS14155 (2964427) | 2964427..2965197 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| I6K25_RS14160 (2965378) | 2965378..2965824 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| I6K25_RS14165 (2965867) | 2965867..2968311 | - | 2445 | WP_000973137.1 | hypothetical protein | VF |
| I6K25_RS14170 (2968551) | 2968551..2969129 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| I6K25_RS14175 (2969334) | 2969334..2970101 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| I6K25_RS14180 (2970072) | 2970072..2970812 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| I6K25_RS14185 (2971124) | 2971124..2971873 | + | 750 | WP_000093936.1 | hypothetical protein | VF |
| I6K25_RS14190 (2972049) | 2972049..2972546 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| I6K25_RS14195 (2972629) | 2972629..2972787 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| I6K25_RS14200 (2972866) | 2972866..2974578 | - | 1713 | Protein_2787 | hypothetical protein | VF |
| I6K25_RS14205 (2974550) | 2974550..2975335 | + | 786 | WP_000207544.1 | hypothetical protein | VF |
| I6K25_RS14210 (2975406) | 2975406..2976461 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| I6K25_RS14215 (2976513) | 2976513..2976806 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| I6K25_RS14220 (2976809) | 2976809..2977207 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| I6K25_RS14225 (2977217) | 2977217..2977669 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| I6K25_RS14230 (2977859) | 2977859..2978998 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| I6K25_RS14235 (2978995) | 2978995..2979609 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| I6K25_RS14240 (2979666) | 2979666..2981123 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| I6K25_RS14245 (2981384) | 2981384..2981842 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - (2982438) | 2982438..2982518 | + | 81 | NuclAT_4 | - | - |
| - (2982438) | 2982438..2982518 | + | 81 | NuclAT_4 | - | - |
| - (2982438) | 2982438..2982518 | + | 81 | NuclAT_4 | - | - |
| - (2982438) | 2982438..2982518 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|