MGE detailed information
MGE type: Conjugative plasmid MGE length: 61257 bp
Accession: NZ_CP069660 Location: 1..61257 Organism: Escherichia coli O89m:H10 strain MIN12 Replicon: plasmid pMUB-MIN12-3
Accession: NZ_CP069660 Location: 1..61257 Organism: Escherichia coli O89m:H10 strain MIN12 Replicon: plasmid pMUB-MIN12-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSU14_RS24945 (1) | 1..858 | + | 858 | WP_033803063.1 | incFII family plasmid replication initiator RepA | - |
| JSU14_RS24950 (1561) | 1561..1701 | + | 141 | WP_000829596.1 | hypothetical protein | - |
| JSU14_RS24955 (1774) | 1774..2043 | + | 270 | WP_000079945.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| JSU14_RS24960 (2043) | 2043..2321 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| JSU14_RS24965 (2393) | 2393..2571 | + | 179 | Protein_4 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JSU14_RS24970 (2642) | 2642..3523 | + | 882 | WP_000005460.1 | hypothetical protein | - |
| JSU14_RS24975 (3458) | 3458..3877 | - | 420 | WP_024181414.1 | hypothetical protein | - |
| JSU14_RS24980 (3986) | 3986..4336 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| JSU14_RS24985 (4339) | 4339..5301 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| JSU14_RS26045 (5472) | 5472..5741 | + | 270 | WP_072126982.1 | hypothetical protein | - |
| JSU14_RS24990 (5836) | 5836..6738 | + | 903 | WP_001513647.1 | DUF1281 domain-containing protein | - |
| JSU14_RS24995 (6735) | 6735..7046 | + | 312 | WP_032144809.1 | hypothetical protein | - |
| JSU14_RS25000 (7123) | 7123..7806 | + | 684 | WP_000085884.1 | DNA methylase | - |
| JSU14_RS25005 (7807) | 7807..8028 | + | 222 | WP_001104865.1 | hypothetical protein | - |
| JSU14_RS25010 (7958) | 7958..8476 | + | 519 | WP_223156508.1 | DUF1380 family protein | - |
| JSU14_RS25015 (8521) | 8521..9291 | + | 771 | WP_001006247.1 | hypothetical protein | - |
| JSU14_RS25020 (9707) | 9707..10132 | + | 426 | WP_001198895.1 | antirestriction protein | - |
| JSU14_RS25025 (10179) | 10179..10601 | + | 423 | WP_000271709.1 | DUF1380 family protein | - |
| JSU14_RS25030 (10598) | 10598..10789 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| JSU14_RS25035 (11109) | 11109..11701 | + | 593 | Protein_19 | Transposon Tn10 TetC protein | VF |
| JSU14_RS25040 (11814) | 11814..13016 | - | 1203 | Protein_20 | Tetracycline resistance protein, class B | ARG |
| JSU14_RS25045 (13098) | 13098..13721 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| JSU14_RS25050 (13711) | 13711..13935 | + | 225 | WP_021503354.1 | hypothetical protein | - |
| JSU14_RS26050 (13839) | 13839..14087 | - | 249 | WP_071703862.1 | hypothetical protein | - |
| JSU14_RS25055 (14599) | 14599..14829 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| JSU14_RS25060 (14881) | 14881..16242 | + | 1362 | WP_000170673.1 | DUF3560 domain-containing protein | - |
| JSU14_RS25065 (16289) | 16289..16850 | + | 562 | Protein_26 | class I SAM-dependent methyltransferase | - |
| JSU14_RS25070 (16850) | 16850..17116 | + | 267 | WP_072005681.1 | hypothetical protein | - |
| JSU14_RS26055 (17002) | 17002..17286 | + | 285 | WP_072165043.1 | hypothetical protein | - |
| JSU14_RS25080 (17759) | 17759..18286 | + | 528 | WP_000290816.1 | single-stranded DNA-binding protein | - |
| JSU14_RS25085 (18342) | 18342..18575 | + | 234 | WP_000005975.1 | DUF905 domain-containing protein | - |
| JSU14_RS25090 (18634) | 18634..20592 | + | 1959 | WP_208284783.1 | ParB/RepB/Spo0J family partition protein | - |
| JSU14_RS25095 (20647) | 20647..21081 | + | 435 | WP_000845966.1 | conjugation system SOS inhibitor PsiB | - |
| JSU14_RS25100 (21078) | 21078..21797 | + | 720 | WP_033803547.1 | plasmid SOS inhibition protein A | - |
| JSU14_RS25105 (21794) | 21794..22108 | + | 315 | WP_000870669.1 | hypothetical protein | - |
| - (22065) | 22065..22264 | + | 200 | NuclAT_0 | - | - |
| - (22065) | 22065..22264 | + | 200 | NuclAT_0 | - | - |
| - (22065) | 22065..22264 | + | 200 | NuclAT_0 | - | - |
| - (22065) | 22065..22264 | + | 200 | NuclAT_0 | - | - |
| - (22065) | 22065..22264 | - | 200 | NuclAT_0 | - | - |
| JSU14_RS26060 (22298) | 22298..22411 | + | 114 | Protein_35 | DUF5431 family protein | - |
| JSU14_RS25110 (22356) | 22356..22478 | + | 123 | WP_223163518.1 | Hok/Gef family protein | - |
| JSU14_RS25115 (22779) | 22779..23028 | - | 250 | Protein_37 | hypothetical protein | - |
| JSU14_RS25120 (23328) | 23328..23624 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| JSU14_RS25125 (23734) | 23734..24555 | + | 822 | WP_001234437.1 | DUF932 domain-containing protein | - |
| JSU14_RS25130 (24851) | 24851..25453 | - | 603 | WP_077776965.1 | hypothetical protein | VF |
| JSU14_RS25135 (25776) | 25776..26159 | + | 384 | WP_000124827.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JSU14_RS25140 (26350) | 26350..27003 | + | 654 | WP_016241851.1 | hypothetical protein | - |
| JSU14_RS25145 (27128) | 27128..27355 | + | 228 | WP_016241852.1 | conjugal transfer relaxosome protein TraY | - |
| JSU14_RS25150 (27388) | 27388..27753 | + | 366 | WP_016235959.1 | type IV conjugative transfer system pilin TraA | - |
| JSU14_RS25155 (27768) | 27768..28079 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| JSU14_RS25160 (28101) | 28101..28667 | + | 567 | WP_016241853.1 | type IV conjugative transfer system protein TraE | - |
| JSU14_RS25165 (28654) | 28654..29382 | + | 729 | WP_016241854.1 | type-F conjugative transfer system secretin TraK | - |
| JSU14_RS25170 (29382) | 29382..30833 | + | 1452 | WP_208284784.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| JSU14_RS25175 (30823) | 30823..31389 | + | 567 | WP_000896600.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| JSU14_RS25180 (31376) | 31376..31696 | + | 321 | WP_016241855.1 | conjugal transfer protein TrbD | - |
| JSU14_RS25185 (31689) | 31689..31940 | + | 252 | WP_208284779.1 | conjugal transfer protein TrbG | - |
| JSU14_RS25190 (31937) | 31937..32452 | + | 516 | WP_115735783.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JSU14_RS25195 (32586) | 32586..32807 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| JSU14_RS25200 (32967) | 32967..35594 | + | 2628 | WP_208284780.1 | type IV secretion system protein TraC | - |
| JSU14_RS25205 (35591) | 35591..35977 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| JSU14_RS25210 (35974) | 35974..36606 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| JSU14_RS25215 (36603) | 36603..37590 | + | 988 | Protein_57 | conjugal transfer pilus assembly protein TraU | - |
| JSU14_RS26065 (37615) | 37615..38111 | + | 497 | Protein_58 | ATP-binding protein | - |
| JSU14_RS25220 (38141) | 38141..38554 | + | 414 | WP_134737552.1 | hypothetical protein | - |
| JSU14_RS25225 (38582) | 38582..39219 | + | 638 | Protein_60 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JSU14_RS25235 (39216) | 39216..41021 | + | 1806 | Protein_61 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JSU14_RS25240 (41048) | 41048..41308 | + | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| JSU14_RS25245 (41301) | 41301..42044 | + | 744 | WP_039002205.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JSU14_RS25250 (42060) | 42060..42407 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| JSU14_RS25255 (42526) | 42526..42809 | + | 284 | Protein_65 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JSU14_RS25260 (42796) | 42796..43389 | + | 594 | Protein_66 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JSU14_RS25265 (43329) | 43329..43629 | + | 301 | Protein_67 | P-type conjugative transfer protein TrbJ | - |
| JSU14_RS25270 (43629) | 43629..44999 | + | 1371 | Protein_68 | conjugal transfer pilus assembly protein TraH | - |
| JSU14_RS25275 (44996) | 44996..47839 | + | 2844 | WP_016236309.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| JSU14_RS25280 (47855) | 47855..48340 | + | 486 | WP_077637851.1 | surface exclusion protein | - |
| JSU14_RS25285 (48389) | 48389..49120 | + | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| JSU14_RS25290 (49373) | 49373..51598 | + | 2226 | WP_208284781.1 | type IV conjugative transfer system coupling protein TraD | - |
| JSU14_RS25295 (51598) | 51598..56868 | + | 5271 | WP_208284782.1 | Multifunctional conjugation protein TraI | Relaxase |
| JSU14_RS25300 (56888) | 56888..57634 | + | 747 | WP_032084127.1 | conjugal transfer pilus acetylase TraX | - |
| JSU14_RS25305 (57689) | 57689..58249 | + | 561 | WP_033803061.1 | fertility inhibition protein FinO | - |
| JSU14_RS25310 (58381) | 58381..58593 | + | 213 | WP_033803062.1 | ANR family transcriptional regulator | - |
| JSU14_RS25315 (58880) | 58880..59557 | + | 678 | WP_000392235.1 | PIN domain-containing protein | - |
| JSU14_RS25320 (59877) | 59877..60467 | + | 591 | WP_024228807.1 | DUF2726 domain-containing protein | - |
| JSU14_RS25325 (60706) | 60706..60966 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| JSU14_RS26070 (61060) | 61060..61245 | + | 186 | Protein_80 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|