MGE detailed information
MGE type: Genomic_island MGE length: 13551 bp
Accession: NZ_CP069602 Location: 2255185..2268735 Organism: Dickeya dianthicola strain 16LI02 Replicon: chromosome
Accession: NZ_CP069602 Location: 2255185..2268735 Organism: Dickeya dianthicola strain 16LI02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JRZ85_RS10345 (JRZ85_10340) | 2250452..2250682 | - | 231 | WP_024105826.1 | DNA polymerase III subunit theta | - |
| JRZ85_RS10350 (JRZ85_10345) | 2250844..2251224 | + | 381 | WP_024105827.1 | copper homeostasis periplasmic binding protein CopC | - |
| JRZ85_RS10355 (JRZ85_10350) | 2251228..2252124 | + | 897 | WP_024109526.1 | copper homeostasis membrane protein CopD | - |
| JRZ85_RS10360 (JRZ85_10355) | 2252366..2252875 | + | 510 | WP_024105829.1 | non-heme ferritin | - |
| JRZ85_RS10365 (JRZ85_10360) | 2253370..2254008 | + | 639 | WP_223303785.1 | DNA/RNA non-specific endonuclease | - |
| JRZ85_RS10370 (JRZ85_10365) | 2254050..2255192 | - | 1143 | WP_024105831.1 | response regulator | - |
| JRZ85_RS10375 (JRZ85_10370) | 2255185..2256282 | - | 1098 | WP_024105832.1 | HDOD domain-containing protein | - |
| JRZ85_RS10380 (JRZ85_10375) | 2256273..2257388 | - | 1116 | WP_024105833.1 | Sensor protein ZraS | VF |
| JRZ85_RS10385 (JRZ85_10380) | 2257381..2258505 | - | 1125 | WP_024105834.1 | FIST N-terminal domain-containing protein | - |
| JRZ85_RS10390 (JRZ85_10385) | 2259950..2260954 | + | 1005 | WP_116587119.1 | IS110 family transposase ISEch4 | Transposase |
| JRZ85_RS10395 (JRZ85_10390) | 2261262..2262019 | + | 758 | Protein_2044 | IS256 family transposase IS285 | Transposase |
| JRZ85_RS10400 (JRZ85_10395) | 2262115..2262339 | - | 225 | WP_024105836.1 | hypothetical protein | - |
| JRZ85_RS10405 (JRZ85_10400) | 2262676..2263077 | + | 402 | WP_024105837.1 | hypothetical protein | - |
| JRZ85_RS22495 | 2263230..2263358 | + | 129 | WP_029729479.1 | hypothetical protein | - |
| JRZ85_RS10410 (JRZ85_10405) | 2263623..2264228 | + | 606 | WP_024105838.1 | hypothetical protein | - |
| JRZ85_RS10415 (JRZ85_10410) | 2264368..2264601 | + | 234 | WP_024105839.1 | hypothetical protein | - |
| JRZ85_RS10420 (JRZ85_10415) | 2264825..2264983 | - | 159 | WP_162928372.1 | hypothetical protein | - |
| JRZ85_RS10425 (JRZ85_10420) | 2265491..2265997 | + | 507 | WP_144414575.1 | hypothetical protein | - |
| - | 2266675..2266757 | + | 83 | - | - | Antitoxin Detail |
| - | 2266677..2266757 | - | 81 | - | - | Toxin Detail |
| JRZ85_RS10430 (JRZ85_10425) | 2266927..2267265 | - | 339 | WP_024105843.1 | YebY family protein | - |
| JRZ85_RS10435 (JRZ85_10430) | 2267739..2268155 | + | 417 | WP_046830401.1 | hypothetical protein | - |
| JRZ85_RS10440 (JRZ85_10435) | 2268487..2268735 | + | 249 | WP_024105845.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| JRZ85_RS10445 (JRZ85_10440) | 2268997..2270271 | - | 1275 | WP_024105846.1 | YeaH/YhbH family protein | - |
| JRZ85_RS10450 (JRZ85_10445) | 2270308..2272242 | - | 1935 | WP_024105847.1 | PrkA family serine protein kinase | - |
| JRZ85_RS10455 (JRZ85_10450) | 2272692..2273435 | + | 744 | WP_024108755.1 | MipA/OmpV family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|