MGE detailed information
MGE type: Prophage MGE length: 18607 bp
Accession: NZ_CP069601 Location: 461490..480096 Organism: Dickeya dianthicola strain 16LI04 Replicon: chromosome
Accession: NZ_CP069601 Location: 461490..480096 Organism: Dickeya dianthicola strain 16LI04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JRZ89_RS02065 (JRZ89_02055) | 457265..458335 | + | 1071 | WP_024104347.1 | LPS export ABC transporter permease LptG | - |
| JRZ89_RS02075 (JRZ89_02065) | 458861..460129 | + | 1269 | WP_024104348.1 | tyrosine-type recombinase/integrase | - |
| JRZ89_RS02080 (JRZ89_02070) | 460229..461446 | + | 1218 | WP_024104349.1 | dNTP triphosphohydrolase | - |
| JRZ89_RS02085 (JRZ89_02075) | 461490..463118 | + | 1629 | WP_024104350.1 | TIGR04141 family sporadically distributed protein | - |
| JRZ89_RS02090 (JRZ89_02080) | 463250..463465 | - | 216 | WP_046830366.1 | helix-turn-helix transcriptional regulator | - |
| JRZ89_RS02095 (JRZ89_02085) | 463561..463827 | + | 267 | WP_015848023.1 | helix-turn-helix transcriptional regulator | - |
| JRZ89_RS22215 | 464050..465129 | - | 1080 | WP_232483843.1 | helicase RepA family protein | - |
| JRZ89_RS22220 | 465253..466095 | - | 843 | Protein_404 | primase-helicase zinc-binding domain-containing protein | - |
| JRZ89_RS22225 | 466088..466264 | - | 177 | WP_228671284.1 | hypothetical protein | - |
| JRZ89_RS22230 | 466346..466624 | - | 279 | Protein_406 | ash family protein | - |
| JRZ89_RS02110 (JRZ89_02100) | 466621..466821 | - | 201 | WP_198298638.1 | AlpA family transcriptional regulator | - |
| JRZ89_RS02115 (JRZ89_02105) | 466824..467705 | - | 882 | WP_103415799.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JRZ89_RS02120 (JRZ89_02110) | 468747..469098 | + | 352 | Protein_409 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JRZ89_RS02125 (JRZ89_02115) | 469082..469405 | + | 324 | WP_024104357.1 | DNA-binding transcriptional regulator | - |
| JRZ89_RS02130 (JRZ89_02120) | 469692..471419 | - | 1728 | WP_103415798.1 | retron Ec67 family RNA-directed DNA polymerase/endonuclease | - |
| JRZ89_RS02135 (JRZ89_02125) | 472540..472860 | + | 321 | WP_024104360.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JRZ89_RS02140 (JRZ89_02130) | 472850..473134 | + | 285 | WP_024104361.1 | helix-turn-helix transcriptional regulator | - |
| JRZ89_RS22235 | 473141..473287 | + | 147 | Protein_414 | transcriptional regulator | - |
| JRZ89_RS02145 (JRZ89_02135) | 473432..473833 | - | 402 | WP_024104362.1 | hypothetical protein | - |
| JRZ89_RS02150 (JRZ89_02140) | 473862..474341 | - | 480 | WP_013316117.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JRZ89_RS02155 (JRZ89_02145) | 474332..474604 | - | 273 | WP_024104363.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JRZ89_RS02160 (JRZ89_02150) | 475094..475517 | + | 424 | Protein_418 | Arm DNA-binding domain-containing protein | - |
| JRZ89_RS02170 (JRZ89_02160) | 476440..476646 | - | 207 | Protein_420 | DUF1778 domain-containing protein | - |
| JRZ89_RS22240 | 476717..476785 | + | 69 | Protein_421 | integrase | - |
| JRZ89_RS22245 | 476810..476902 | + | 93 | Protein_422 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| JRZ89_RS02175 (JRZ89_02165) | 476944..478332 | + | 1389 | WP_024104366.1 | hypothetical protein | - |
| JRZ89_RS02180 (JRZ89_02170) | 478482..478820 | - | 339 | WP_024104367.1 | hypothetical protein | - |
| JRZ89_RS02185 (JRZ89_02175) | 479293..480096 | + | 804 | WP_024108133.1 | hypothetical protein | - |
| JRZ89_RS02190 (JRZ89_02180) | 480186..480812 | - | 627 | WP_024104369.1 | LysE/ArgO family amino acid transporter | - |
| JRZ89_RS02195 (JRZ89_02185) | 481009..481491 | - | 483 | WP_024104370.1 | DNA mismatch endonuclease Vsr | - |
| JRZ89_RS02200 (JRZ89_02190) | 481498..482928 | - | 1431 | WP_024104371.1 | DNA cytosine methyltransferase | - |
| JRZ89_RS02205 (JRZ89_02195) | 483168..484481 | + | 1314 | WP_024108134.1 | MvaI/BcnI family restriction endonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|