MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 62651 bp
Accession: NZ_CP069599 Location: 1548928..1611578 Organism: Dickeya dianthicola strain 16MB01 Replicon: chromosome
Accession: NZ_CP069599 Location: 1548928..1611578 Organism: Dickeya dianthicola strain 16MB01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JRZ87_RS07225 (JRZ87_07215) | 1545593..1545955 | - | 363 | WP_035071708.1 | arsenite efflux transporter metallochaperone ArsD | - |
| JRZ87_RS07230 (JRZ87_07220) | 1546003..1546356 | - | 354 | WP_274519689.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| JRZ87_RS07235 (JRZ87_07225) | 1546740..1547536 | + | 797 | WP_234003755.1 | IS5 family transposase | - |
| JRZ87_RS07240 (JRZ87_07230) | 1547884..1548258 | + | 375 | WP_024106445.1 | hypothetical protein | - |
| JRZ87_RS07245 (JRZ87_07235) | 1548338..1548742 | + | 405 | WP_024106444.1 | DUF2513 domain-containing protein | - |
| JRZ87_RS07250 (JRZ87_07240) | 1549228..1550222 | - | 995 | Protein_1417 | IS3 family transposase | - |
| JRZ87_RS07255 (JRZ87_07245) | 1550462..1551211 | - | 750 | WP_024108537.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| JRZ87_RS07260 (JRZ87_07250) | 1551215..1552468 | - | 1254 | WP_024108538.1 | MFS transporter | - |
| JRZ87_RS07265 (JRZ87_07255) | 1552775..1553668 | + | 894 | WP_024108539.1 | phosphoenolpyruvate mutase | - |
| JRZ87_RS07270 (JRZ87_07260) | 1553672..1554790 | + | 1119 | WP_024108540.1 | phosphonopyruvate decarboxylase | - |
| JRZ87_RS07275 (JRZ87_07265) | 1554780..1556000 | + | 1221 | WP_026594701.1 | pyridoxal phosphate-dependent aminotransferase | - |
| JRZ87_RS07280 (JRZ87_07270) | 1556015..1556851 | + | 837 | WP_024108542.1 | phytanoyl-CoA dioxygenase family protein | - |
| JRZ87_RS07285 (JRZ87_07275) | 1556864..1557973 | + | 1110 | WP_024108543.1 | 2-aminoethylphosphonate--pyruvate transaminase | - |
| JRZ87_RS07290 (JRZ87_07280) | 1557970..1559070 | + | 1101 | WP_103415789.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| JRZ87_RS07295 (JRZ87_07285) | 1559060..1560079 | + | 1020 | WP_024108545.1 | GNAT family N-acetyltransferase | - |
| JRZ87_RS07300 (JRZ87_07290) | 1560239..1561066 | + | 828 | WP_024108546.1 | class I SAM-dependent methyltransferase | - |
| JRZ87_RS07305 (JRZ87_07295) | 1561063..1562259 | + | 1197 | WP_024108547.1 | ATP-grasp domain-containing protein | - |
| JRZ87_RS07310 (JRZ87_07300) | 1562261..1562950 | + | 690 | WP_024108548.1 | aspartyl/asparaginyl beta-hydroxylase domain-containing protein | - |
| JRZ87_RS07315 (JRZ87_07305) | 1563026..1563997 | + | 972 | WP_024108549.1 | IS481 family transposase | - |
| JRZ87_RS07320 (JRZ87_07310) | 1564037..1564259 | - | 223 | Protein_1431 | IS4/IS5 family transposase | - |
| JRZ87_RS07325 (JRZ87_07315) | 1564386..1570205 | - | 5820 | WP_024108550.1 | DEAD/DEAH box helicase | - |
| JRZ87_RS07330 (JRZ87_07320) | 1570225..1572318 | - | 2094 | WP_024108551.1 | hypothetical protein | - |
| JRZ87_RS07335 (JRZ87_07325) | 1572330..1574903 | - | 2574 | WP_024108552.1 | hypothetical protein | - |
| JRZ87_RS07340 (JRZ87_07330) | 1574900..1576129 | - | 1230 | WP_024108553.1 | DNA cytosine methyltransferase | - |
| JRZ87_RS07345 (JRZ87_07335) | 1576828..1577772 | + | 945 | WP_116587116.1 | zincin-like metallopeptidase domain-containing protein | - |
| JRZ87_RS07350 (JRZ87_07340) | 1578099..1578335 | + | 237 | WP_024108942.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| JRZ87_RS07355 (JRZ87_07345) | 1578338..1578652 | + | 315 | WP_024108941.1 | CcdB family protein | Toxin Detail |
| JRZ87_RS07360 (JRZ87_07350) | 1579132..1579914 | + | 783 | WP_024108940.1 | hypothetical protein | - |
| JRZ87_RS07365 (JRZ87_07355) | 1580201..1580947 | - | 747 | WP_103415724.1 | MobC family replication-relaxation protein | - |
| JRZ87_RS07370 (JRZ87_07360) | 1580956..1582719 | - | 1764 | WP_103415725.1 | type IV secretion system DNA-binding domain-containing protein | - |
| JRZ87_RS07375 (JRZ87_07365) | 1583443..1583745 | - | 303 | WP_103415726.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| JRZ87_RS07380 (JRZ87_07370) | 1583789..1584792 | - | 1004 | Protein_1443 | Transketolase | VF |
| JRZ87_RS07385 (JRZ87_07375) | 1584850..1585746 | - | 897 | WP_198298637.1 | P-type conjugative transfer protein VirB9 | - |
| JRZ87_RS07390 (JRZ87_07380) | 1585743..1586426 | - | 684 | WP_024106436.1 | PTS system fructose-specific EIIB'BC component | VF |
| JRZ87_RS07395 (JRZ87_07385) | 1586647..1587675 | - | 1029 | WP_024106435.1 | type IV secretion system protein | - |
| JRZ87_RS07400 (JRZ87_07390) | 1587687..1587911 | - | 225 | WP_012769218.1 | EexN family lipoprotein | - |
| JRZ87_RS07405 (JRZ87_07395) | 1587922..1588638 | - | 717 | WP_103415728.1 | type IV secretion system protein | - |
| JRZ87_RS07410 (JRZ87_07400) | 1588663..1590627 | - | 1965 | WP_103415729.1 | putative cation-transporting ATPase E | VF |
| JRZ87_RS07415 (JRZ87_07405) | 1590638..1590913 | - | 276 | WP_035044784.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | VF |
| JRZ87_RS07420 (JRZ87_07410) | 1590933..1591580 | - | 648 | WP_026594786.1 | hypothetical protein | VF |
| JRZ87_RS07425 (JRZ87_07415) | 1591651..1591884 | - | 234 | WP_024106431.1 | hypothetical protein | - |
| JRZ87_RS07430 (JRZ87_07420) | 1592361..1594088 | + | 1728 | WP_103415730.1 | AIPR family protein | - |
| JRZ87_RS07435 (JRZ87_07425) | 1594384..1594587 | - | 204 | WP_103415731.1 | TraR/DksA family transcriptional regulator | - |
| JRZ87_RS07440 (JRZ87_07430) | 1594577..1595161 | - | 585 | WP_103415732.1 | DUF2857 domain-containing protein | - |
| JRZ87_RS07445 (JRZ87_07435) | 1595178..1595372 | - | 195 | WP_012884167.1 | AlpA family transcriptional regulator | - |
| JRZ87_RS07450 (JRZ87_07440) | 1596039..1596296 | - | 258 | WP_024106427.1 | helix-turn-helix transcriptional regulator | - |
| JRZ87_RS07455 (JRZ87_07445) | 1596410..1596688 | - | 279 | WP_024106426.1 | Response regulator protein GraR | VF |
| JRZ87_RS07460 (JRZ87_07450) | 1596822..1597109 | + | 288 | WP_103415733.1 | helix-turn-helix transcriptional regulator | - |
| JRZ87_RS07465 (JRZ87_07455) | 1597388..1597633 | - | 246 | WP_013318575.1 | helix-turn-helix transcriptional regulator | - |
| JRZ87_RS07470 (JRZ87_07460) | 1598391..1598909 | + | 519 | WP_012768188.1 | Putative HTH-type transcriptional regulator YwnA | VF |
| JRZ87_RS07475 (JRZ87_07465) | 1599023..1600876 | + | 1854 | WP_103415734.1 | hypothetical protein | VF |
| JRZ87_RS07480 (JRZ87_07470) | 1600891..1601298 | + | 408 | WP_024106422.1 | DUF1795 domain-containing protein | - |
| JRZ87_RS07485 (JRZ87_07475) | 1601310..1605659 | + | 4350 | WP_234003752.1 | RHS repeat-associated core domain-containing protein | - |
| JRZ87_RS07490 (JRZ87_07480) | 1605659..1606024 | + | 366 | WP_024106420.1 | hypothetical protein | - |
| JRZ87_RS07495 (JRZ87_07485) | 1606079..1607032 | + | 954 | Protein_1466 | hypothetical protein | VF |
| JRZ87_RS07500 (JRZ87_07490) | 1607029..1607460 | + | 432 | WP_024106418.1 | SMI1/KNR4 family protein | - |
| JRZ87_RS07505 (JRZ87_07495) | 1607710..1608636 | - | 927 | WP_024106417.1 | hypothetical protein | - |
| JRZ87_RS07510 (JRZ87_07500) | 1609652..1609963 | + | 312 | WP_024106415.1 | DUF736 domain-containing protein | - |
| JRZ87_RS07515 (JRZ87_07505) | 1610118..1611401 | - | 1284 | WP_103415735.1 | putative metallo-hydrolase ; Integrase | Integrase |
| JRZ87_RS07525 (JRZ87_07515) | 1611837..1614968 | - | 3132 | WP_029729363.1 | beta-galactosidase | - |
| JRZ87_RS07530 (JRZ87_07520) | 1615168..1616241 | - | 1074 | WP_024105240.1 | LacI family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|