MGE detailed information
MGE type: Genomic_island MGE length: 25202 bp
Accession: NZ_CP069595 Location: 1852588..1877789 Organism: Dickeya dianthicola strain PA24 Replicon: chromosome
Accession: NZ_CP069595 Location: 1852588..1877789 Organism: Dickeya dianthicola strain PA24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JRZ93_RS08500 (JRZ93_08495) | 1848268..1849794 | + | 1527 | WP_024105479.1 | DHA2 family efflux MFS transporter permease subunit | - |
| JRZ93_RS08505 (JRZ93_08500) | 1849970..1850785 | + | 816 | WP_232483795.1 | helix-turn-helix domain-containing protein | - |
| JRZ93_RS08510 (JRZ93_08505) | 1850990..1851475 | + | 486 | WP_024105481.1 | DUF2501 domain-containing protein | - |
| JRZ93_RS08515 (JRZ93_08510) | 1851617..1852207 | - | 591 | WP_024108562.1 | flavin reductase family protein | - |
| JRZ93_RS08520 (JRZ93_08515) | 1852588..1852920 | + | 333 | WP_024105483.1 | DUF1971 domain-containing protein | - |
| JRZ93_RS08525 (JRZ93_08520) | 1852931..1853269 | + | 339 | WP_024105484.1 | DUF1869 domain-containing protein | - |
| JRZ93_RS08530 (JRZ93_08525) | 1853397..1854386 | + | 990 | Protein_1673 | IS3 family transposase | - |
| JRZ93_RS08535 (JRZ93_08530) | 1854478..1855353 | + | 876 | WP_024108563.1 | DUF2971 domain-containing protein | - |
| JRZ93_RS08540 (JRZ93_08535) | 1855540..1856433 | - | 894 | WP_024108564.1 | MBL fold metallo-hydrolase | - |
| JRZ93_RS08545 (JRZ93_08540) | 1856993..1857613 | - | 621 | WP_024108565.1 | flavin reductase family protein | - |
| JRZ93_RS08550 (JRZ93_08545) | 1857839..1858252 | - | 414 | WP_024108566.1 | tautomerase family protein | - |
| JRZ93_RS08555 (JRZ93_08550) | 1858317..1858727 | - | 411 | WP_024108567.1 | hypothetical protein | - |
| JRZ93_RS08560 (JRZ93_08555) | 1858809..1859702 | - | 894 | WP_024108568.1 | alpha/beta hydrolase | - |
| JRZ93_RS08565 (JRZ93_08560) | 1859711..1860694 | - | 984 | WP_024108569.1 | MBL fold metallo-hydrolase | - |
| JRZ93_RS08570 (JRZ93_08565) | 1860960..1861445 | + | 486 | WP_024108570.1 | helix-turn-helix domain-containing protein | - |
| JRZ93_RS08575 (JRZ93_08570) | 1861541..1861675 | + | 135 | Protein_1682 | winged helix-turn-helix transcriptional regulator | - |
| JRZ93_RS08580 (JRZ93_08575) | 1861697..1862428 | + | 732 | Protein_1683 | zincin-like metallopeptidase domain-containing protein | - |
| JRZ93_RS08585 (JRZ93_08580) | 1862755..1862991 | + | 237 | WP_024108345.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| JRZ93_RS08590 (JRZ93_08585) | 1862994..1863308 | + | 315 | WP_024108344.1 | CcdB family protein | Toxin Detail |
| JRZ93_RS08595 (JRZ93_08590) | 1863951..1864469 | + | 519 | WP_024108343.1 | Hcp family type VI secretion system effector | - |
| JRZ93_RS08600 (JRZ93_08595) | 1864582..1866438 | + | 1857 | WP_024108342.1 | type VI secretion system tip protein VgrG | - |
| JRZ93_RS22295 | 1866464..1866748 | + | 285 | Protein_1688 | type VI secretion system PAAR protein | - |
| JRZ93_RS08610 (JRZ93_08605) | 1866988..1867863 | + | 876 | WP_024108340.1 | DUF6402 family protein | - |
| JRZ93_RS08615 (JRZ93_08610) | 1867860..1868291 | + | 432 | WP_071599229.1 | DUF6201 family protein | - |
| JRZ93_RS08620 (JRZ93_08615) | 1868385..1868429 | + | 45 | Protein_1691 | hypothetical protein | - |
| JRZ93_RS22300 | 1868478..1868687 | + | 210 | WP_234003768.1 | hypothetical protein | - |
| JRZ93_RS22310 | 1868901..1869044 | + | 144 | WP_234003767.1 | RHS repeat domain-containing protein | - |
| JRZ93_RS08630 (JRZ93_08625) | 1869100..1869318 | + | 219 | WP_024108337.1 | hypothetical protein | - |
| JRZ93_RS22315 | 1869460..1869665 | + | 206 | Protein_1695 | hypothetical protein | - |
| JRZ93_RS08635 (JRZ93_08630) | 1869727..1870653 | - | 927 | WP_024108336.1 | hypothetical protein | - |
| JRZ93_RS08640 (JRZ93_08635) | 1871353..1871649 | + | 297 | WP_103415962.1 | DUF736 domain-containing protein | - |
| JRZ93_RS08645 (JRZ93_08640) | 1871762..1873045 | - | 1284 | WP_024108655.1 | integrase arm-type DNA-binding domain-containing protein | - |
| JRZ93_RS08655 (JRZ93_08650) | 1873392..1874183 | - | 792 | WP_024105495.1 | DgsA anti-repressor MtfA | - |
| JRZ93_RS08665 (JRZ93_08660) | 1874786..1875133 | + | 348 | WP_024105496.1 | DUF3168 domain-containing protein | - |
| JRZ93_RS08670 (JRZ93_08665) | 1875227..1877464 | + | 2238 | WP_024108656.1 | discoidin domain-containing protein | - |
| JRZ93_RS08675 (JRZ93_08670) | 1877622..1877789 | + | 168 | WP_024105498.1 | YqaE/Pmp3 family membrane protein | - |
| JRZ93_RS08680 (JRZ93_08675) | 1877860..1878414 | - | 555 | WP_024105499.1 | flavodoxin family protein | - |
| JRZ93_RS08685 (JRZ93_08680) | 1878696..1879748 | - | 1053 | WP_024105500.1 | glycosyltransferase | - |
| JRZ93_RS08690 (JRZ93_08685) | 1879864..1880259 | - | 396 | WP_024105501.1 | acyl-CoA thioesterase | - |
| JRZ93_RS08695 (JRZ93_08690) | 1880349..1881107 | - | 759 | WP_024105502.1 | molybdopterin-synthase adenylyltransferase MoeB | - |
| JRZ93_RS08700 (JRZ93_08695) | 1881107..1882342 | - | 1236 | WP_024105503.1 | molybdopterin molybdotransferase MoeA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|