MGE detailed information
MGE type: Conjugative plasmid MGE length: 92886 bp
Accession: NZ_CP069481 Location: 1..92886 Organism: Escherichia coli strain FDAARGOS_1257 Replicon: plasmid unnamed
Accession: NZ_CP069481 Location: 1..92886 Organism: Escherichia coli strain FDAARGOS_1257 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J87_RS24935 () | 1370..1567 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| I6J87_RS24940 () | 1564..2988 | - | 1425 | WP_001389385.1 | hypothetical protein | VF |
| I6J87_RS24945 () | 2988..3644 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| I6J87_RS24950 () | 3629..4189 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| I6J87_RS24955 () | 4199..4813 | - | 615 | WP_001542527.1 | hypothetical protein | VF |
| I6J87_RS24960 () | 4831..5928 | - | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| I6J87_RS24965 () | 5941..7494 | - | 1554 | WP_001492932.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| I6J87_RS24970 () | 7505..7957 | - | 453 | WP_001247870.1 | hypothetical protein | VF |
| I6J87_RS24975 () | 7944..9239 | - | 1296 | WP_001388364.1 | type 4b pilus protein PilO2 | - |
| I6J87_RS24980 () | 9232..10914 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| I6J87_RS24985 () | 10928..11365 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| I6J87_RS24990 () | 11365..12432 | - | 1068 | WP_012783947.1 | hypothetical protein | VF |
| I6J87_RS24995 () | 13056..13352 | - | 297 | WP_050571830.1 | hypothetical protein | - |
| I6J87_RS25000 () | 13519..13773 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| I6J87_RS25005 () | 13935..14486 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| I6J87_RS25010 () | 14659..15342 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| I6J87_RS25015 () | 15596..16129 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| I6J87_RS25020 () | 16571..16858 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| I6J87_RS25025 () | 16776..17039 | - | 264 | WP_001749178.1 | ash family protein | - |
| I6J87_RS25030 () | 18012..19043 | + | 1032 | WP_048257187.1 | replication initiation protein | - |
| I6J87_RS25035 () | 20112..20621 | - | 510 | WP_000045394.1 | hypothetical protein | - |
| I6J87_RS25040 () | 20677..21279 | - | 603 | WP_000517692.1 | hypothetical protein | - |
| I6J87_RS25045 () | 21633..22979 | + | 1347 | WP_001132033.1 | hypothetical protein | - |
| I6J87_RS25050 () | 23258..24811 | + | 1554 | WP_113349831.1 | colicin | - |
| I6J87_RS25055 () | 24964..26226 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| I6J87_RS25060 () | 26476..27351 | + | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| I6J87_RS25065 () | 27386..28354 | + | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| I6J87_RS25070 () | 28411..29508 | + | 1098 | Protein_27 | TonB-dependent receptor | - |
| I6J87_RS25075 () | 29582..29941 | + | 360 | WP_071889081.1 | colicin | - |
| I6J87_RS25080 () | 29963..30298 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| I6J87_RS25085 () | 30427..30774 | + | 348 | WP_016231295.1 | hypothetical protein | - |
| I6J87_RS25090 () | 30794..31384 | - | 591 | WP_024227072.1 | hypothetical protein | - |
| I6J87_RS25095 () | 31384..31641 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| I6J87_RS25100 () | 32210..32623 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| I6J87_RS25105 () | 32625..33404 | + | 780 | WP_024227071.1 | site-specific integrase | - |
| I6J87_RS25110 () | 33585..34229 | + | 645 | WP_001144036.1 | ParA family protein | - |
| I6J87_RS25115 () | 34316..34624 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| I6J87_RS25120 () | 35038..36018 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| I6J87_RS25125 () | 36011..36427 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| I6J87_RS25130 () | 36429..37703 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| I6J87_RS25135 () | 37703..38140 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| I6J87_RS25140 () | 38137..38385 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| I6J87_RS25145 () | 38803..39705 | + | 903 | WP_126122062.1 | DUF1281 domain-containing protein | - |
| I6J87_RS25150 () | 39702..40013 | + | 312 | WP_032143956.1 | hypothetical protein | - |
| I6J87_RS25155 () | 40089..40772 | + | 684 | WP_001474699.1 | DNA methylase | - |
| I6J87_RS25160 () | 40773..40994 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| I6J87_RS25165 () | 41008..41442 | + | 435 | WP_000274499.1 | DUF1380 family protein | - |
| I6J87_RS25170 () | 41487..42257 | + | 771 | WP_001006206.1 | hypothetical protein | - |
| I6J87_RS25175 () | 42799..43101 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| I6J87_RS25180 () | 43148..43570 | + | 423 | WP_016231291.1 | DUF1380 family protein | - |
| I6J87_RS25185 () | 43567..43758 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| I6J87_RS25190 () | 44092..44160 | - | 69 | Protein_51 | pilus protein | - |
| I6J87_RS25195 () | 44529..45056 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| I6J87_RS25200 () | 45114..45347 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| I6J87_RS25205 () | 45406..47364 | + | 1959 | WP_042004724.1 | ParB/RepB/Spo0J family partition protein | - |
| I6J87_RS25210 () | 47419..47853 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| I6J87_RS25215 () | 47850..48569 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| I6J87_RS25220 () | 48566..49162 | + | 597 | WP_024227064.1 | hypothetical protein | - |
| I6J87_RS25225 () | 49625..50125 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| I6J87_RS25230 () | 50854..51288 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| I6J87_RS25235 () | 51382..51648 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| I6J87_RS25240 () | 51713..52627 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| I6J87_RS25245 () | 52627..52872 | + | 246 | WP_073853190.1 | hypothetical protein | - |
| I6J87_RS25250 () | 52903..53154 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| I6J87_RS25255 () | 53188..53385 | - | 198 | WP_071791907.1 | hypothetical protein | - |
| I6J87_RS25260 () | 53734..54582 | + | 849 | WP_024227041.1 | DUF4942 domain-containing protein | - |
| I6J87_RS25265 () | 54668..55003 | - | 336 | WP_024227040.1 | hypothetical protein | - |
| I6J87_RS25270 () | 55236..55568 | + | 333 | WP_001281051.1 | hypothetical protein | - |
| I6J87_RS25275 () | 55579..58278 | + | 2700 | WP_021520371.1 | Protein TraI | Relaxase |
| I6J87_RS25280 () | 58315..60606 | - | 2292 | WP_021520372.1 | hypothetical protein | - |
| I6J87_RS25285 () | 60599..61669 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| I6J87_RS25290 () | 61688..62896 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| I6J87_RS25295 () | 63114..64100 | - | 987 | WP_001257838.1 | hypothetical protein | - |
| - () | 64261..64316 | - | 56 | NuclAT_1 | - | - |
| - () | 64261..64316 | - | 56 | NuclAT_1 | - | - |
| - () | 64261..64316 | - | 56 | NuclAT_1 | - | - |
| - () | 64261..64316 | - | 56 | NuclAT_1 | - | - |
| - () | 64557..64614 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64557..64614 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64557..64614 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64557..64614 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| I6J87_RS25300 () | 64669..64821 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| I6J87_RS25305 () | 64893..65144 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| I6J87_RS25310 () | 65803..65979 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| I6J87_RS25315 () | 66371..66580 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| I6J87_RS25320 () | 66652..67302 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| I6J87_RS25325 () | 67376..69544 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| I6J87_RS25330 () | 69641..70225 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| I6J87_RS25335 () | 70254..71456 | - | 1203 | WP_042004725.1 | IncI1-type conjugal transfer protein TraW | - |
| I6J87_RS25340 () | 71423..72037 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| I6J87_RS25345 () | 72037..75081 | - | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| I6J87_RS25350 () | 75171..75971 | - | 801 | WP_001164784.1 | IncI1-type conjugal transfer protein TraT | - |
| I6J87_RS25355 () | 75955..76143 | - | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| I6J87_RS25360 () | 76207..76611 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| I6J87_RS25365 () | 76662..77189 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| I6J87_RS25370 () | 77189..77893 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| I6J87_RS25375 () | 77893..79182 | - | 1290 | WP_042004726.1 | conjugal transfer protein TraO | - |
| I6J87_RS25380 () | 79185..80168 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| I6J87_RS25385 () | 80179..80871 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| I6J87_RS25390 () | 80868..81215 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| I6J87_RS25395 () | 81233..85000 | - | 3768 | WP_001141527.1 | DNA primase | - |
| I6J87_RS25400 () | 85090..85641 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| I6J87_RS25405 () | 85656..85946 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| I6J87_RS25410 () | 85943..87091 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| I6J87_RS25415 () | 87088..87906 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| I6J87_RS25420 () | 87903..88361 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| I6J87_RS25425 () | 88755..89339 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| I6J87_RS25430 () | 89399..90601 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| I6J87_RS25435 () | 90687..91511 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| I6J87_RS25440 () | 91662..92816 | - | 1155 | WP_001139955.1 | integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|