MGE detailed information
MGE type: Genomic_island MGE length: 45375 bp
Accession: NZ_CP069085 Location: 1193623..1238997 Organism: Xanthomonas campestris pv. campestris strain BJSJQ20200612 Replicon: chromosome
Accession: NZ_CP069085 Location: 1193623..1238997 Organism: Xanthomonas campestris pv. campestris strain BJSJQ20200612 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JM952_RS04960 (JM952_04975) | 1189378..1190163 | - | 786 | WP_218065343.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| JM952_RS04965 (JM952_04980) | 1190309..1191103 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| JM952_RS04970 (JM952_04985) | 1191152..1191352 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| JM952_RS04975 (JM952_04990) | 1191542..1193326 | + | 1785 | WP_043890239.1 | autotransporter domain-containing esterase | - |
| JM952_RS04985 (JM952_05000) | 1193590..1195167 | + | 1578 | WP_100666311.1 | hypothetical protein ; Integrase | Integrase |
| JM952_RS04990 (JM952_05005) | 1195227..1195655 | + | 429 | WP_145998822.1 | hypothetical protein | - |
| JM952_RS04995 (JM952_05010) | 1196040..1196828 | - | 789 | WP_145998823.1 | hypothetical protein | - |
| JM952_RS05000 (JM952_05015) | 1196902..1197795 | - | 894 | WP_145998824.1 | hypothetical protein | - |
| JM952_RS05005 (JM952_05020) | 1197961..1198341 | - | 381 | WP_172973787.1 | hypothetical protein | - |
| JM952_RS05010 (JM952_05025) | 1198338..1198652 | - | 315 | WP_218065344.1 | hypothetical protein | - |
| JM952_RS05015 (JM952_05030) | 1198702..1199463 | - | 762 | WP_100666316.1 | hypothetical protein | - |
| JM952_RS05020 (JM952_05035) | 1199641..1199940 | + | 300 | WP_230428394.1 | helix-turn-helix transcriptional regulator | - |
| JM952_RS05025 (JM952_05040) | 1200009..1200440 | + | 432 | WP_100666318.1 | hypothetical protein | - |
| JM952_RS05030 (JM952_05045) | 1200445..1200897 | - | 453 | WP_145998825.1 | hypothetical protein | - |
| JM952_RS05035 (JM952_05050) | 1201100..1202500 | - | 1401 | WP_218065345.1 | hypothetical protein ; Integrase | Integrase |
| JM952_RS05040 (JM952_05055) | 1203108..1203623 | - | 516 | WP_100666321.1 | hypothetical protein | - |
| JM952_RS05045 (JM952_05060) | 1203712..1204197 | + | 486 | WP_145998826.1 | hypothetical protein | - |
| JM952_RS05050 (JM952_05065) | 1204330..1205814 | - | 1485 | WP_100666322.1 | hypothetical protein | - |
| JM952_RS05055 (JM952_05070) | 1205894..1206859 | - | 966 | WP_145998827.1 | hypothetical protein | - |
| JM952_RS05060 (JM952_05075) | 1207249..1207509 | + | 261 | WP_145998828.1 | hypothetical protein | - |
| JM952_RS05065 (JM952_05080) | 1207496..1207993 | - | 498 | WP_152091502.1 | hypothetical protein | - |
| JM952_RS05070 (JM952_05085) | 1208103..1208633 | - | 531 | WP_152091503.1 | hypothetical protein | - |
| JM952_RS05075 (JM952_05090) | 1208668..1209480 | - | 813 | WP_152091504.1 | hypothetical protein | - |
| JM952_RS05080 (JM952_05095) | 1209477..1209785 | - | 309 | WP_152091505.1 | hypothetical protein | - |
| JM952_RS05085 (JM952_05100) | 1209996..1210475 | + | 480 | WP_152091506.1 | DNA repair protein RadC | - |
| JM952_RS05090 (JM952_05105) | 1210544..1210720 | + | 177 | WP_172973789.1 | hypothetical protein | - |
| JM952_RS05095 (JM952_05110) | 1210940..1211581 | + | 642 | WP_152091507.1 | DUF1629 domain-containing protein | - |
| JM952_RS05100 (JM952_05115) | 1211617..1214202 | + | 2586 | WP_218065346.1 | hypothetical protein | - |
| JM952_RS05105 (JM952_05120) | 1214442..1215245 | - | 804 | WP_230428395.1 | hypothetical protein | - |
| JM952_RS05110 (JM952_05125) | 1215529..1216035 | - | 507 | WP_230428396.1 | hypothetical protein | - |
| JM952_RS05115 (JM952_05130) | 1216112..1216747 | + | 636 | WP_230428397.1 | hypothetical protein | - |
| JM952_RS05120 (JM952_05135) | 1216865..1217023 | + | 159 | WP_172973790.1 | hypothetical protein | - |
| JM952_RS05130 (JM952_05145) | 1219092..1219568 | - | 477 | WP_152091510.1 | hypothetical protein | - |
| JM952_RS05135 (JM952_05150) | 1219730..1220476 | - | 747 | WP_218065347.1 | ATP-dependent endonuclease | - |
| JM952_RS05140 (JM952_05155) | 1221098..1221099 | - | 2 | WP_087942062.1 | IS5 family transposase IS1480a | Transposase |
| JM952_RS05145 (JM952_05160) | 1221344..1222555 | - | 1212 | WP_218065348.1 | AAA family ATPase | - |
| JM952_RS05150 (JM952_05165) | 1223091..1223390 | - | 300 | WP_100666201.1 | conjugal transfer protein TraD | - |
| JM952_RS05155 (JM952_05170) | 1223657..1225252 | + | 1596 | WP_100666199.1 | MobA/MobL family protein | - |
| JM952_RS05160 (JM952_05175) | 1225305..1225646 | - | 342 | WP_100666197.1 | hypothetical protein | - |
| JM952_RS05165 (JM952_05180) | 1226340..1226768 | + | 429 | WP_012437589.1 | hypothetical protein | - |
| JM952_RS05170 (JM952_05185) | 1227011..1227241 | - | 231 | WP_157382680.1 | hypothetical protein | - |
| JM952_RS05175 (JM952_05190) | 1227305..1227451 | + | 147 | WP_040940792.1 | hypothetical protein | - |
| JM952_RS05180 (JM952_05195) | 1227636..1228031 | + | 396 | WP_016945003.1 | hypothetical protein | - |
| JM952_RS05185 (JM952_05200) | 1228122..1228514 | + | 393 | WP_012437593.1 | H-NS family nucleoid-associated regulatory protein | - |
| JM952_RS05190 (JM952_05205) | 1229048..1231177 | - | 2130 | WP_016945001.1 | glycogen debranching protein GlgX | - |
| JM952_RS05195 (JM952_05210) | 1231671..1232546 | + | 876 | WP_016945000.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| JM952_RS05200 (JM952_05215) | 1232769..1233242 | + | 474 | WP_012437597.1 | hypothetical protein | - |
| JM952_RS05205 (JM952_05220) | 1233273..1233950 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| JM952_RS05210 (JM952_05225) | 1233943..1235277 | + | 1335 | WP_012437598.1 | HAMP domain-containing sensor histidine kinase | - |
| JM952_RS05215 (JM952_05230) | 1235420..1235911 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JM952_RS05220 (JM952_05235) | 1235908..1236198 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JM952_RS05225 (JM952_05240) | 1236273..1236674 | - | 402 | WP_019237348.1 | SymE family type I addiction module toxin | - |
| JM952_RS05230 (JM952_05245) | 1237206..1237829 | - | 624 | WP_011038217.1 | dephospho-CoA kinase | - |
| JM952_RS05235 (JM952_05250) | 1237843..1238706 | - | 864 | WP_011038216.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JM952_RS05240 (JM952_05255) | 1238713..1239969 | - | 1257 | WP_011038215.1 | type II secretion system F family protein | - |
| JM952_RS05245 (JM952_05260) | 1240296..1240736 | + | 441 | WP_011038214.1 | pilin | - |
| JM952_RS05250 (JM952_05265) | 1240816..1241250 | + | 435 | WP_011038213.1 | pilin | - |
| JM952_RS05255 (JM952_05270) | 1241315..1243048 | + | 1734 | WP_011038212.1 | type IV-A pilus assembly ATPase PilB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|