MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 20473 bp
Accession: NZ_CP069075 Location: 3125365..3145837 Organism: Mycobacterium tuberculosis strain N0004 Replicon: chromosome
Accession: NZ_CP069075 Location: 3125365..3145837 Organism: Mycobacterium tuberculosis strain N0004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JN138_RS14900 | 3120649..3120840 | + | 192 | WP_003414184.1 | hypothetical protein | - |
| JN138_RS14905 | 3121057..3121317 | + | 261 | Protein_2949 | transposase | - |
| JN138_RS14910 | 3122019..3122192 | + | 174 | WP_234713711.1 | hypothetical protein | - |
| JN138_RS14915 | 3122426..3122683 | + | 258 | WP_003899489.1 | hypothetical protein | - |
| JN138_RS14920 | 3122788..3123099 | + | 312 | WP_003414190.1 | hypothetical protein | - |
| JN138_RS14925 | 3123121..3123357 | - | 237 | Protein_2953 | transposase | - |
| JN138_RS14930 | 3123519..3124127 | + | 609 | WP_003414195.1 | hypothetical protein | - |
| JN138_RS14935 | 3124198..3125607 | + | 1410 | WP_025985358.1 | DDE-type integrase/transposase/recombinase | - |
| JN138_RS14940 | 3125604..3126416 | + | 813 | WP_003899491.1 | hypothetical protein | VF |
| JN138_RS14950 | 3130976..3131317 | - | 342 | WP_003414276.1 | CRISPR-associated endonuclease Cas2 | - |
| JN138_RS14955 | 3131318..3132334 | - | 1017 | WP_003414279.1 | CRISPR-associated endonuclease Cas1 | - |
| JN138_RS14960 | 3132347..3133594 | - | 1248 | WP_003899494.1 | type III-A CRISPR-associated CARF protein Csm6 | - |
| JN138_RS14965 | 3133591..3134718 | - | 1128 | WP_003414285.1 | type III-A CRISPR-associated RAMP protein Csm5 | - |
| JN138_RS14970 | 3134715..3135623 | - | 909 | WP_003414288.1 | type III-A CRISPR-associated RAMP protein Csm4 | - |
| JN138_RS14975 | 3135604..3136314 | - | 711 | WP_003414292.1 | type III-A CRISPR-associated RAMP protein Csm3 | - |
| JN138_RS14980 | 3136324..3136698 | - | 375 | WP_003414296.1 | type III-A CRISPR-associated protein Csm2 | - |
| JN138_RS14985 | 3136695..3139133 | - | 2439 | WP_003900580.1 | type III-A CRISPR-associated protein Cas10/Csm1 | - |
| JN138_RS14990 | 3139130..3139918 | - | 789 | WP_003917092.1 | CRISPR-associated endoribonuclease Cas6 | - |
| JN138_RS14995 | 3140252..3140797 | - | 546 | WP_014584866.1 | DUF1802 family protein | - |
| JN138_RS15000 | 3141069..3141953 | - | 885 | WP_003414409.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| JN138_RS15005 | 3141956..3142843 | - | 888 | WP_015630563.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| JN138_RS15010 | 3143148..3143693 | - | 546 | WP_019284034.1 | DUF1802 family protein | - |
| JN138_RS15015 | 3143690..3143959 | - | 270 | WP_003414489.1 | DUF2277 family protein | - |
| JN138_RS15020 | 3143980..3144372 | - | 393 | WP_003414492.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JN138_RS15025 | 3144369..3144584 | - | 216 | WP_003414495.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JN138_RS15030 | 3144631..3145380 | + | 750 | WP_003414497.1 | enoyl-CoA hydratase | - |
| JN138_RS15035 | 3145459..3146541 | - | 1083 | WP_003414499.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| JN138_RS15040 | 3146534..3147844 | - | 1311 | WP_003414501.1 | ABC transporter substrate-binding protein | - |
| JN138_RS15045 | 3147847..3148674 | - | 828 | WP_003414504.1 | carbohydrate ABC transporter permease | - |
| JN138_RS15050 | 3148671..3149582 | - | 912 | WP_003414505.1 | sugar ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|