MGE detailed information
MGE type: Prophage MGE length: 85852 bp
Accession: NZ_CP068830 Location: 2240276..2326127 Organism: Escherichia coli strain RIVM_C018707 Replicon: chromosome
Accession: NZ_CP068830 Location: 2240276..2326127 Organism: Escherichia coli strain RIVM_C018707 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN82_RS10710 () | 2237324..2238295 | - | 972 | WP_000564730.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| JNN82_RS10715 () | 2238292..2239035 | - | 744 | WP_000019591.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| JNN82_RS10720 () | 2239076..2239471 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| JNN82_RS10725 () | 2239524..2240294 | - | 771 | WP_042196262.1 | DUF72 domain-containing protein | - |
| JNN82_RS10730 () | 2240276..2241589 | - | 1314 | WP_000362007.1 | site-specific integrase | - |
| JNN82_RS10735 () | 2241645..2241881 | - | 237 | WP_000528717.1 | excisionase family protein | - |
| JNN82_RS10740 () | 2241890..2242036 | - | 147 | WP_001030145.1 | hypothetical protein | - |
| JNN82_RS10745 () | 2242040..2242282 | - | 243 | WP_000457737.1 | DUF4222 domain-containing protein | - |
| JNN82_RS10750 () | 2242406..2242975 | - | 570 | WP_000586690.1 | hypothetical protein | - |
| JNN82_RS10755 () | 2242972..2243721 | - | 750 | WP_001028556.1 | ORF6N domain-containing protein | - |
| JNN82_RS10760 () | 2243765..2244592 | - | 828 | WP_000734576.1 | hypothetical protein | - |
| JNN82_RS10765 () | 2244838..2245230 | - | 393 | WP_108433742.1 | hypothetical protein | - |
| JNN82_RS10770 () | 2245417..2245632 | - | 216 | WP_000002323.1 | hypothetical protein | - |
| JNN82_RS10775 () | 2245632..2245991 | - | 360 | WP_000148631.1 | hypothetical protein | - |
| JNN82_RS10780 () | 2246176..2246367 | - | 192 | WP_108433741.1 | hypothetical protein | - |
| JNN82_RS10785 () | 2246364..2246555 | - | 192 | WP_108433740.1 | hypothetical protein | - |
| JNN82_RS10790 () | 2246557..2246973 | - | 417 | WP_108433739.1 | helix-turn-helix transcriptional regulator | - |
| JNN82_RS10795 () | 2247070..2247726 | - | 657 | WP_000838346.1 | helix-turn-helix domain-containing protein | - |
| JNN82_RS10800 () | 2248772..2250430 | + | 1659 | WP_000424041.1 | DEAD/DEAH box helicase | - |
| JNN82_RS10805 () | 2250432..2251400 | + | 969 | WP_000844628.1 | toprim domain-containing protein | - |
| JNN82_RS10810 () | 2251400..2252257 | + | 858 | WP_001258397.1 | hypothetical protein | - |
| JNN82_RS10815 () | 2252257..2253072 | + | 816 | WP_048956940.1 | antitermination protein | - |
| JNN82_RS10820 () | 2253209..2254153 | - | 945 | WP_000576620.1 | hypothetical protein | - |
| JNN82_RS10835 () | 2254966..2255181 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| JNN82_RS10840 () | 2255186..2255536 | + | 351 | WP_000193280.1 | YdfR family protein | - |
| JNN82_RS10845 () | 2255600..2256133 | + | 534 | WP_000992100.1 | lysozyme | - |
| JNN82_RS10850 () | 2256350..2256535 | + | 186 | WP_001228685.1 | Rz1 family lipoprotein | - |
| JNN82_RS10855 () | 2256753..2257019 | + | 267 | WP_001100260.1 | hypothetical protein | - |
| JNN82_RS10860 () | 2257025..2257564 | - | 540 | WP_000351660.1 | YfbU family protein | - |
| JNN82_RS10865 () | 2257703..2258053 | + | 351 | WP_001111090.1 | HNH endonuclease | - |
| JNN82_RS10870 () | 2258202..2258684 | + | 483 | WP_014639227.1 | phage terminase small subunit P27 family | - |
| JNN82_RS10875 () | 2258684..2260441 | + | 1758 | WP_016245372.1 | terminase large subunit | - |
| JNN82_RS10880 () | 2260438..2260599 | + | 162 | WP_000811487.1 | hypothetical protein | - |
| JNN82_RS10885 () | 2260589..2261815 | + | 1227 | WP_000923129.1 | phage portal protein | - |
| JNN82_RS10890 () | 2261808..2262407 | + | 600 | WP_000999828.1 | HK97 family phage prohead protease | - |
| JNN82_RS10895 () | 2262422..2263639 | + | 1218 | WP_000766109.1 | phage major capsid protein | - |
| JNN82_RS10900 () | 2263716..2264033 | + | 318 | WP_000719066.1 | head-tail connector protein | - |
| JNN82_RS10905 () | 2264042..2264380 | + | 339 | WP_001147814.1 | phage head closure protein | - |
| JNN82_RS10910 () | 2264377..2264826 | + | 450 | WP_000968644.1 | HK97 gp10 family phage protein | - |
| JNN82_RS10915 () | 2264823..2265167 | + | 345 | WP_001206698.1 | DUF3168 domain-containing protein | - |
| JNN82_RS10920 () | 2265227..2265931 | + | 705 | WP_000097528.1 | immunoglobulin domain-containing protein | - |
| JNN82_RS10925 () | 2265946..2266317 | + | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| JNN82_RS10930 () | 2266341..2266619 | + | 279 | WP_000978930.1 | DUF4035 domain-containing protein | - |
| JNN82_RS10935 () | 2266666..2269905 | + | 3240 | WP_000224011.1 | phage tail tape measure protein | - |
| JNN82_RS10940 () | 2269898..2270239 | + | 342 | WP_001115183.1 | phage tail protein | - |
| JNN82_RS10945 () | 2270239..2270937 | + | 699 | WP_203003909.1 | phage minor tail protein L | - |
| JNN82_RS10950 () | 2270943..2271686 | + | 744 | WP_124056273.1 | C40 family peptidase | - |
| JNN82_RS10955 () | 2271584..2272231 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| JNN82_RS10960 () | 2272292..2276098 | + | 3807 | WP_124056274.1 | DUF1983 domain-containing protein | - |
| JNN82_RS10965 () | 2276166..2276765 | + | 600 | WP_124056275.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| JNN82_RS10970 () | 2276830..2278896 | + | 2067 | WP_124056276.1 | prophage tail fiber N-terminal domain-containing protein | - |
| JNN82_RS10975 () | 2278893..2279171 | + | 279 | WP_001204581.1 | hypothetical protein | - |
| JNN82_RS10980 () | 2279181..2279468 | + | 288 | WP_001513565.1 | hypothetical protein | - |
| JNN82_RS10985 () | 2279586..2279834 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| JNN82_RS10990 () | 2280189..2280755 | - | 567 | WP_001551241.1 | hydrolase | - |
| JNN82_RS10995 () | 2281065..2282837 | + | 1773 | WP_001551240.1 | aspartate--tRNA ligase | - |
| JNN82_RS11000 () | 2282955..2283407 | + | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
| JNN82_RS11005 () | 2283436..2284176 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| JNN82_RS11010 () | 2284211..2284732 | + | 522 | WP_001551239.1 | crossover junction endodeoxyribonuclease RuvC | - |
| JNN82_RS11015 () | 2284734..2285336 | - | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| JNN82_RS11020 () | 2285407..2285472 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| JNN82_RS11025 () | 2285611..2286222 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| JNN82_RS11030 () | 2286231..2287241 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| JNN82_RS11035 () | 2287391..2288176 | - | 786 | WP_000571479.1 | zinc ABC transporter permease subunit ZnuB | - |
| JNN82_RS11040 () | 2288173..2288928 | - | 756 | WP_000202996.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| JNN82_RS11045 () | 2289007..2289939 | + | 933 | WP_011076428.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| JNN82_RS11050 () | 2289955..2291277 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| JNN82_RS11055 () | 2291397..2292368 | + | 972 | WP_001551238.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| JNN82_RS11060 () | 2292500..2293942 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| JNN82_RS11065 () | 2294070..2294939 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| JNN82_RS11070 () | 2295277..2296752 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| JNN82_RS11075 () | 2296987..2298798 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| JNN82_RS11080 () | 2298835..2299476 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JNN82_RS11085 () | 2299531..2300709 | - | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JNN82_RS11090 () | 2300843..2301133 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JNN82_RS11095 () | 2301200..2301556 | + | 357 | WP_001295500.1 | protein YebF | - |
| JNN82_RS11100 () | 2301883..2302542 | + | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| JNN82_RS11105 () | 2302706..2303875 | - | 1170 | WP_001551234.1 | transposase | - |
| JNN82_RS11110 () | 2303932..2304357 | + | 426 | WP_000064873.1 | IS200/IS605-like element ISEc46 family transposase | - |
| JNN82_RS11115 () | 2304514..2306574 | + | 2061 | WP_001551233.1 | oligopeptidase B | - |
| JNN82_RS11120 () | 2306571..2307233 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JNN82_RS11125 () | 2307257..2307913 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein | - |
| JNN82_RS11130 () | 2308015..2308245 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JNN82_RS11135 () | 2308384..2308758 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| JNN82_RS11140 () | 2308762..2309634 | + | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| JNN82_RS11145 () | 2309647..2309988 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 2310016..2310287 | - | 272 | - | - | Antitoxin Detail |
| - () | 2310146..2310249 | + | 104 | - | - | Toxin Detail |
| JNN82_RS11150 () | 2310384..2311040 | + | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| JNN82_RS11155 () | 2311041..2311232 | - | 192 | WP_001296140.1 | YebW family protein | - |
| JNN82_RS11160 () | 2311337..2311573 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JNN82_RS11165 () | 2311691..2313130 | - | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JNN82_RS11170 () | 2313210..2315843 | - | 2634 | WP_001306757.1 | lipid-binding membrane homeostasis protein YebT | - |
| JNN82_RS11175 () | 2315812..2317095 | - | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| JNN82_RS11180 () | 2317225..2317722 | + | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| JNN82_RS11185 () | 2317819..2318517 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JNN82_RS11190 () | 2318537..2320585 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| JNN82_RS11195 () | 2320777..2321658 | + | 882 | WP_000984517.1 | protease HtpX | - |
| JNN82_RS11200 () | 2321704..2323077 | - | 1374 | WP_001551227.1 | MFS transporter | - |
| JNN82_RS11205 () | 2323254..2324045 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| JNN82_RS11210 () | 2324189..2324428 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| JNN82_RS11215 () | 2324587..2324730 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JNN82_RS11220 () | 2324805..2325092 | + | 288 | WP_001006855.1 | YebO family protein | - |
| JNN82_RS11225 () | 2325762..2325905 | + | 144 | WP_001295496.1 | YobF family protein | - |
| JNN82_RS11230 () | 2325918..2326127 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JNN82_RS11235 () | 2326293..2327102 | + | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JNN82_RS11240 () | 2327099..2327665 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JNN82_RS11245 () | 2328094..2328552 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| JNN82_RS11250 () | 2328607..2329458 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JNN82_RS11255 () | 2329471..2330271 | - | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|