MGE detailed information
MGE type: Genomic_island MGE length: 76675 bp
Accession: NZ_CP068817 Location: 3854564..3931238 Organism: Escherichia coli strain RIVM_C028786 Replicon: chromosome
Accession: NZ_CP068817 Location: 3854564..3931238 Organism: Escherichia coli strain RIVM_C028786 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN59_RS18460 () | 3849721..3850308 | + | 588 | WP_001298544.1 | transcriptional regulator BetI | - |
| JNN59_RS18465 () | 3850322..3851794 | + | 1473 | WP_000089053.1 | betaine-aldehyde dehydrogenase | - |
| JNN59_RS18470 () | 3851808..3853478 | + | 1671 | WP_001159127.1 | choline dehydrogenase | - |
| JNN59_RS18475 () | 3854564..3855127 | + | 564 | WP_001335180.1 | Tyrosine recombinase XerD | VF |
| JNN59_RS18480 () | 3855457..3856251 | + | 795 | WP_001335181.1 | LuxR family transcriptional regulator HyxR | - |
| JNN59_RS18485 () | 3856405..3857166 | + | 762 | WP_001213042.1 | protein HyxA | - |
| JNN59_RS18490 () | 3857208..3858290 | + | 1083 | Protein_3626 | adhesin | - |
| JNN59_RS18495 () | 3858312..3859505 | + | 1194 | WP_071787751.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| JNN59_RS18500 () | 3859689..3860357 | + | 669 | WP_001005267.1 | membrane protein | - |
| JNN59_RS18505 () | 3860600..3861295 | - | 696 | WP_001298555.1 | lactate utilization protein C | - |
| JNN59_RS18510 () | 3861288..3862715 | - | 1428 | WP_000023923.1 | iron-sulfur cluster-binding protein | - |
| JNN59_RS18515 () | 3862726..3863445 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| JNN59_RS18520 () | 3863972..3864826 | - | 855 | WP_000339603.1 | DNA-binding transcriptional regulator RclR | - |
| JNN59_RS18525 () | 3865053..3866378 | + | 1326 | WP_001046335.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| JNN59_RS18530 () | 3866487..3866723 | + | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| JNN59_RS18535 () | 3866735..3867328 | + | 594 | WP_001298546.1 | reactive chlorine species resistance protein RclC | - |
| JNN59_RS18540 () | 3867488..3868357 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| JNN59_RS18545 () | 3868605..3869462 | + | 858 | WP_000620997.1 | Right origin-binding protein | VF |
| JNN59_RS18550 () | 3869587..3873834 | - | 4248 | WP_000092548.1 | Invasin | VF |
| JNN59_RS18555 () | 3874400..3875251 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| JNN59_RS18560 () | 3875278..3876267 | + | 990 | WP_001172293.1 | aldo/keto reductase | - |
| JNN59_RS18565 () | 3876298..3877191 | - | 894 | WP_000910711.1 | HTH-type transcriptional regulator PgrR | VF |
| JNN59_RS18570 () | 3877391..3878317 | - | 927 | WP_001304867.1 | HTH-type transcriptional regulator PgrR | VF |
| JNN59_RS18575 () | 3878474..3879394 | + | 921 | WP_000860032.1 | alpha/beta hydrolase | - |
| JNN59_RS18580 () | 3879566..3880708 | + | 1143 | WP_000182341.1 | NADH-dependent flavin oxidoreductase | - |
| JNN59_RS18585 () | 3881181..3881282 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| JNN59_RS18590 () | 3881647..3881910 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| JNN59_RS18595 () | 3881910..3882050 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| JNN59_RS18600 () | 3882120..3882310 | - | 191 | Protein_3648 | hypothetical protein | - |
| JNN59_RS18605 () | 3883134..3883676 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| JNN59_RS18610 () | 3883767..3884339 | + | 573 | WP_042856856.1 | Common pilus major fimbrillin subunit EcpA | VF |
| JNN59_RS18615 () | 3884396..3885064 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| JNN59_RS18620 () | 3885090..3887616 | + | 2527 | Protein_3652 | putative outer membrane usher protein EcpC | VF |
| JNN59_RS18625 () | 3887606..3889249 | + | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| JNN59_RS18630 () | 3889218..3889928 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| JNN59_RS18635 () | 3890235..3890564 | + | 330 | WP_001335188.1 | YkgJ family cysteine cluster protein | - |
| JNN59_RS18640 () | 3890576..3890739 | - | 164 | Protein_3656 | tail fiber assembly protein | - |
| JNN59_RS18645 () | 3890813..3891427 | - | 615 | WP_001019923.1 | YagU family protein | - |
| JNN59_RS18650 () | 3891642..3891827 | - | 186 | WP_000146243.1 | hypothetical protein | - |
| JNN59_RS18655 () | 3891876..3892034 | + | 159 | Protein_3659 | integrase | - |
| JNN59_RS18660 () | 3892251..3892944 | - | 694 | Protein_3660 | IS1 family transposase | - |
| JNN59_RS18665 () | 3893537..3897667 | + | 4131 | WP_001034003.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| JNN59_RS18670 () | 3897823..3898317 | + | 495 | WP_001059463.1 | Transcriptional repressor MprA | VF |
| JNN59_RS18675 () | 3898752..3899090 | - | 339 | WP_000772639.1 | Arm DNA-binding domain-containing protein | - |
| JNN59_RS18680 () | 3899456..3900775 | + | 1320 | WP_000144686.1 | Prophage integrase IntA ; Integrase | Integrase |
| JNN59_RS18685 () | 3900868..3901722 | - | 855 | WP_024174313.1 | DUF4942 domain-containing protein | - |
| JNN59_RS18690 () | 3901807..3902004 | - | 198 | WP_000839247.1 | DUF957 domain-containing protein | - |
| JNN59_RS18695 () | 3902016..3902504 | - | 489 | WP_000761726.1 | hypothetical protein | - |
| JNN59_RS18700 () | 3902501..3902878 | - | 378 | WP_000854700.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN59_RS18705 () | 3902968..3903336 | - | 369 | WP_001531802.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN59_RS18710 () | 3903499..3903720 | - | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| JNN59_RS18715 () | 3903789..3904265 | - | 477 | WP_001186199.1 | RadC family protein | - |
| JNN59_RS18720 () | 3904281..3904766 | - | 486 | WP_000213723.1 | antirestriction protein | - |
| JNN59_RS18725 () | 3904858..3905676 | - | 819 | WP_001234709.1 | DUF945 domain-containing protein | - |
| JNN59_RS18730 () | 3906003..3909125 | - | 3123 | WP_202847140.1 | autotransporter adhesin Ag43 | - |
| JNN59_RS18735 () | 3909459..3910331 | - | 873 | WP_021538680.1 | GTPase family protein | - |
| JNN59_RS18740 () | 3910662..3910844 | + | 183 | WP_000282123.1 | hypothetical protein | - |
| JNN59_RS18745 () | 3911145..3911507 | - | 363 | WP_000229734.1 | IS66 family transposase ISEc23 | Transposase |
| JNN59_RS18750 () | 3911894..3913204 | + | 1311 | WP_000016482.1 | cadaverine/lysine antiporter | - |
| JNN59_RS18755 () | 3913235..3915361 | + | 2127 | WP_001092279.1 | lysine decarboxylase LdcC | - |
| JNN59_RS18760 () | 3915565..3916275 | + | 711 | WP_000215693.1 | helix-turn-helix domain-containing protein | - |
| JNN59_RS18765 () | 3916569..3918065 | + | 1497 | WP_001298165.1 | lysine--tRNA ligase | - |
| JNN59_RS18770 () | 3918112..3918999 | + | 888 | WP_001178453.1 | HTH-type transcriptional regulator ArgP | - |
| JNN59_RS18775 () | 3919786..3920148 | + | 363 | WP_000239761.1 | IS66 family transposase IS682 | Transposase |
| JNN59_RS18780 () | 3920145..3920492 | + | 348 | WP_000624593.1 | IS66 family transposase ISCro1 | Transposase |
| JNN59_RS18785 () | 3920512..3921111 | + | 600 | Protein_3685 | IS66 family transposase IS679 | Transposase |
| JNN59_RS18790 () | 3921180..3921962 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| JNN59_RS18795 () | 3921959..3922531 | - | 573 | Protein_3687 | IS21 family transposase IS100kyp | Transposase |
| JNN59_RS18800 () | 3922518..3922660 | - | 143 | Protein_3688 | IS110 family transposase | - |
| JNN59_RS18805 () | 3922721..3922906 | + | 186 | Protein_3689 | IS66 family transposase IS682 | Transposase |
| JNN59_RS18810 () | 3923013..3924212 | - | 1200 | WP_001298139.1 | GTP-binding protein | - |
| JNN59_RS18815 () | 3924476..3925267 | - | 792 | WP_000977398.1 | DUF4198 domain-containing protein | - |
| JNN59_RS18820 () | 3925286..3927256 | - | 1971 | WP_001445605.1 | Hemin receptor | VF |
| JNN59_RS18825 () | 3927602..3928965 | + | 1364 | Protein_3693 | IS4 family transposase ISEc13 | Transposase |
| JNN59_RS18835 () | 3930855..3931238 | + | 384 | Protein_3694 | IS4 family transposase IS4 | Transposase |
| JNN59_RS18840 () | 3931249..3931548 | - | 300 | WP_000805229.1 | hypothetical protein | - |
| JNN59_RS18845 () | 3932086..3933201 | + | 1116 | WP_001298145.1 | salmochelin biosynthesis C-glycosyltransferase IroB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|