MGE detailed information
MGE type: Genomic_island MGE length: 18737 bp
Accession: NZ_CP068815 Location: 4352901..4371637 Organism: Escherichia coli strain RIVM_C028620 Replicon: chromosome
Accession: NZ_CP068815 Location: 4352901..4371637 Organism: Escherichia coli strain RIVM_C028620 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN49_RS20850 () | 4348321..4349343 | - | 1023 | WP_000106005.1 | zinc-binding alcohol dehydrogenase family protein | - |
| JNN49_RS20855 () | 4349482..4350387 | + | 906 | WP_000091596.1 | GntR family transcriptional regulator | - |
| JNN49_RS20860 () | 4350558..4352210 | - | 1653 | WP_001298060.1 | Na+/H+ antiporter | - |
| JNN49_RS20865 () | 4352901..4353872 | + | 972 | WP_000034589.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| JNN49_RS20870 () | 4353936..4354409 | + | 474 | WP_001235678.1 | TRAP transporter small permease | - |
| JNN49_RS20875 () | 4354406..4355677 | + | 1272 | WP_000118642.1 | TRAP transporter large permease | - |
| JNN49_RS20880 () | 4355720..4357384 | - | 1665 | WP_000919563.1 | Methyl-accepting chemotaxis protein I | VF |
| JNN49_RS20885 () | 4357761..4359911 | + | 2151 | WP_001298085.1 | pyruvate/proton symporter BtsT | - |
| JNN49_RS20890 () | 4360029..4360232 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| JNN49_RS20895 () | 4360243..4361199 | + | 957 | WP_001298065.1 | GTPase | - |
| JNN49_RS20900 () | 4361268..4362920 | - | 1653 | WP_001298048.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| JNN49_RS20905 () | 4363198..4365630 | + | 2433 | WP_000819015.1 | DEAD/DEAH box helicase family protein | - |
| JNN49_RS20910 () | 4365697..4367166 | + | 1470 | WP_001540814.1 | type I restriction-modification system subunit M | - |
| JNN49_RS20915 () | 4367166..4368872 | + | 1707 | WP_001100194.1 | restriction endonuclease subunit S | - |
| - () | 4369022..4369098 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4369022..4369098 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4369022..4369098 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4369022..4369098 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4369022..4369098 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4369022..4369098 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4369022..4369098 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4369022..4369098 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| JNN49_RS20920 () | 4369093..4369434 | + | 342 | WP_000132614.1 | endoribonuclease SymE | Toxin Detail |
| JNN49_RS20925 () | 4369481..4371574 | - | 2094 | WP_000648237.1 | DUF262 domain-containing protein | - |
| JNN49_RS20930 () | 4371672..4371752 | - | 81 | WP_020233658.1 | hypothetical protein | - |
| JNN49_RS20935 () | 4371980..4372900 | - | 921 | WP_000181195.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| JNN49_RS20940 () | 4373085..4374365 | + | 1281 | WP_001298033.1 | DUF445 domain-containing protein | - |
| JNN49_RS20945 () | 4374481..4375632 | + | 1152 | WP_001298064.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| JNN49_RS20950 () | 4375642..4376409 | + | 768 | WP_001298028.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|