MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP068811 Location: 3965891..3976649 Organism: Escherichia coli strain RIVM_C028568 Replicon: chromosome
Accession: NZ_CP068811 Location: 3965891..3976649 Organism: Escherichia coli strain RIVM_C028568 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN42_RS19020 () | 3961237..3962019 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JNN42_RS19025 () | 3962335..3965544 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| JNN42_RS19030 () | 3965705..3965845 | + | 141 | WP_001308408.1 | ash family protein | - |
| JNN42_RS19035 () | 3965891..3966361 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| JNN42_RS19040 () | 3966358..3966460 | + | 103 | Protein_3727 | helix-turn-helix domain-containing protein | - |
| JNN42_RS19045 () | 3966552..3966710 | + | 159 | Protein_3728 | integrase | - |
| JNN42_RS19055 () | 3966915..3968168 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JNN42_RS19060 () | 3968180..3969283 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JNN42_RS19065 () | 3969571..3970626 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| JNN42_RS19070 () | 3970665..3971066 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| JNN42_RS19075 () | 3971124..3972368 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3971784..3971864 | - | 81 | NuclAT_10 | - | - |
| - () | 3971784..3971864 | - | 81 | NuclAT_10 | - | - |
| - () | 3971784..3971864 | - | 81 | NuclAT_10 | - | - |
| - () | 3971784..3971864 | - | 81 | NuclAT_10 | - | - |
| JNN42_RS19080 () | 3972460..3972918 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JNN42_RS19085 () | 3973179..3974636 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JNN42_RS19090 () | 3974693..3975045 | - | 353 | Protein_3736 | peptide chain release factor H | - |
| JNN42_RS19095 () | 3975041..3975247 | - | 207 | Protein_3737 | RtcB family protein | - |
| JNN42_RS19100 () | 3975493..3975945 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| JNN42_RS19105 () | 3975955..3976353 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JNN42_RS19110 () | 3976356..3976649 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JNN42_RS19115 () | 3976701..3977756 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| JNN42_RS19120 () | 3977827..3978612 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| JNN42_RS19125 () | 3978584..3980296 | + | 1713 | Protein_3743 | flagellar biosynthesis protein FlhA | - |
| JNN42_RS19130 () | 3980401..3980679 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| JNN42_RS19135 () | 3980672..3981028 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|