MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 73583 bp
Accession: NZ_CP068804 Location: 828197..901779 Organism: Escherichia coli strain RIVM_C018563 Replicon: chromosome
Accession: NZ_CP068804 Location: 828197..901779 Organism: Escherichia coli strain RIVM_C018563 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN37_RS03890 () | 824798..825946 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| JNN37_RS03895 () | 826018..827001 | - | 984 | WP_001296394.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| JNN37_RS03900 () | 827811..827981 | - | 171 | Protein_765 | IS110 family transposase | - |
| JNN37_RS03905 () | 828324..829166 | - | 843 | Protein_766 | DUF4942 domain-containing protein | - |
| JNN37_RS03910 () | 829251..829445 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| JNN37_RS03915 () | 829524..829673 | - | 150 | Protein_768 | hypothetical protein | - |
| JNN37_RS03920 () | 829670..830047 | - | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN37_RS03925 () | 830137..830505 | - | 369 | WP_021553056.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN37_RS03930 () | 830668..830889 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| JNN37_RS03935 () | 830954..831430 | - | 477 | WP_021553055.1 | RadC family protein | - |
| JNN37_RS03940 () | 831446..831925 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| JNN37_RS03945 () | 832191..833009 | - | 819 | WP_001564059.1 | DUF945 domain-containing protein | - |
| JNN37_RS03950 () | 833099..833332 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| JNN37_RS03955 () | 833338..834015 | - | 678 | WP_001564058.1 | hypothetical protein | - |
| JNN37_RS03960 () | 834166..834846 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| JNN37_RS03965 () | 835049..835933 | - | 885 | WP_001564055.1 | 50S ribosome-binding GTPase | - |
| JNN37_RS03970 () | 836034..837257 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| JNN37_RS03975 () | 838421..838951 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| JNN37_RS03980 () | 839621..840352 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| JNN37_RS03985 () | 840873..841325 | + | 453 | WP_000558152.1 | N-acetyltransferase | - |
| JNN37_RS03990 () | 841861..842796 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| JNN37_RS03995 () | 842789..843724 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| JNN37_RS04000 () | 843808..845058 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| JNN37_RS04005 () | 845077..846171 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| JNN37_RS04010 () | 847472..848038 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| JNN37_RS04015 () | 848296..848871 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| JNN37_RS04020 () | 848940..849173 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| JNN37_RS04025 () | 849185..849410 | + | 226 | Protein_790 | hypothetical protein | - |
| JNN37_RS04030 () | 849472..849738 | - | 267 | Protein_791 | transposase | - |
| JNN37_RS04035 () | 849829..850986 | + | 1158 | Protein_792 | efflux RND transporter permease subunit | - |
| JNN37_RS04040 () | 851107..851757 | + | 651 | WP_001564048.1 | TetR/AcrR family transcriptional regulator | - |
| JNN37_RS04045 () | 851780..852073 | + | 294 | Protein_794 | helix-turn-helix domain-containing protein | - |
| JNN37_RS04050 () | 852430..852975 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| JNN37_RS04055 () | 853020..854171 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| JNN37_RS04060 () | 854300..855355 | - | 1056 | WP_001564046.1 | propanediol utilization response regulator transcription factor GrpQ | - |
| JNN37_RS04065 () | 855372..856601 | - | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| JNN37_RS04070 () | 857217..857810 | - | 594 | Protein_799 | maturase | - |
| JNN37_RS04075 () | 857810..858179 | - | 370 | Protein_800 | reverse transcriptase/maturase | - |
| JNN37_RS04080 () | 858791..859696 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| JNN37_RS04085 () | 859833..860750 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| JNN37_RS04090 () | 860859..863411 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| JNN37_RS04095 () | 863460..864035 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| JNN37_RS04100 () | 864046..864345 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| JNN37_RS04105 () | 864369..865886 | - | 1518 | WP_000997839.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| JNN37_RS04110 () | 865947..866732 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| JNN37_RS04115 () | 866754..867035 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| JNN37_RS04120 () | 867320..868516 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| JNN37_RS04125 () | 868545..869042 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| JNN37_RS04130 () | 869070..869339 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| JNN37_RS04135 () | 869351..870055 | - | 705 | WP_000370214.1 | propanediol utilization system flavoprotein GrpD | - |
| JNN37_RS04140 () | 870060..870818 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| JNN37_RS04145 () | 870873..871559 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| JNN37_RS04150 () | 871699..872817 | - | 1119 | WP_000135343.1 | propanediol utilization system alcohol dehydrogenase GrpA | - |
| JNN37_RS04155 () | 873174..873674 | + | 501 | Protein_816 | DNA-binding protein | - |
| JNN37_RS04160 () | 873770..874003 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| JNN37_RS04165 () | 874056..874247 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| JNN37_RS04170 () | 874968..875228 | + | 261 | Protein_819 | transposase | - |
| JNN37_RS04175 () | 875371..877116 | + | 1746 | WP_001564039.1 | AAA family ATPase | - |
| JNN37_RS04180 () | 877510..877950 | + | 441 | WP_001403216.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| JNN37_RS04185 () | 877991..878857 | + | 867 | Protein_822 | ImpA domain protein | - |
| JNN37_RS04190 () | 878974..879618 | + | 645 | WP_024196335.1 | hypothetical protein | - |
| JNN37_RS04195 () | 879759..880991 | + | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| JNN37_RS04200 () | 880976..881614 | + | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| JNN37_RS04205 () | 881693..881962 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| JNN37_RS04210 () | 881983..882627 | + | 645 | WP_106106617.1 | hypothetical protein | - |
| JNN37_RS04215 () | 882692..883015 | + | 324 | WP_001564033.1 | hypothetical protein | - |
| JNN37_RS04220 () | 883063..883854 | - | 792 | Protein_829 | ATP-dependent helicase | - |
| JNN37_RS04225 () | 883849..884238 | + | 390 | Protein_830 | IS3 family transposase | - |
| JNN37_RS04230 () | 884910..886418 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| JNN37_RS04235 () | 886508..886981 | + | 474 | Protein_832 | IS3 family transposase | - |
| JNN37_RS04240 () | 887179..887436 | - | 258 | Protein_833 | IS3 family transposase | - |
| JNN37_RS04245 () | 887506..887853 | - | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| JNN37_RS04250 () | 888472..889165 | - | 694 | Protein_835 | IS1 family transposase | - |
| JNN37_RS04255 () | 889418..890887 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| JNN37_RS04260 () | 890992..893361 | + | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| JNN37_RS04265 () | 893436..894935 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| JNN37_RS04270 () | 895078..895775 | + | 698 | Protein_839 | IS1 family transposase | - |
| JNN37_RS04275 () | 896242..896793 | - | 552 | WP_001447126.1 | MarR family transcriptional regulator | - |
| JNN37_RS04280 () | 896960..897751 | - | 792 | Protein_841 | IS3 family transposase | - |
| JNN37_RS04285 () | 897768..898465 | - | 698 | Protein_842 | IS1 family transposase | - |
| JNN37_RS04290 () | 898995..900038 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| JNN37_RS04295 () | 900294..901559 | - | 1266 | WP_001218869.1 | integrase arm-type DNA-binding domain-containing protein | - |
| JNN37_RS04305 () | 901938..902645 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| JNN37_RS04310 () | 903037..905172 | + | 2136 | WP_001564026.1 | ornithine decarboxylase | - |
| JNN37_RS04315 () | 905221..906477 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|