MGE detailed information
MGE type: Prophage MGE length: 63161 bp
Accession: NZ_CP068283 Location: 221614..284774 Organism: Escherichia coli strain CY598 Replicon: chromosome
Accession: NZ_CP068283 Location: 221614..284774 Organism: Escherichia coli strain CY598 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JI738_RS00980 (217057) | 217057..218775 | - | 1719 | WP_001260717.1 | proline--tRNA ligase | - |
| JI738_RS00985 (218887) | 218887..219594 | - | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| JI738_RS00990 (219591) | 219591..219995 | - | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| JI738_RS00995 (220113) | 220113..220928 | - | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| JI738_RS01000 (220968) | 220968..221621 | - | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| JI738_RS01005 (221614) | 221614..222645 | - | 1032 | WP_000594006.1 | hypothetical protein | VF |
| JI738_RS01010 (222833) | 222833..223408 | + | 576 | WP_001140187.1 | hypothetical protein | VF |
| JI738_RS01045 (229167) | 229167..229970 | + | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| JI738_RS01050 (229967) | 229967..230881 | - | 915 | WP_000648572.1 | hypothetical protein | VF |
| JI738_RS01055 (231122) | 231122..231922 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| JI738_RS01060 (231953) | 231953..232549 | + | 597 | Protein_205 | methyltransferase domain-containing protein | - |
| JI738_RS01065 (232597) | 232597..233955 | - | 1359 | WP_000644685.1 | hypothetical protein | VF |
| JI738_RS01070 (234027) | 234027..234782 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| JI738_RS01075 (234816) | 234816..235538 | + | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| JI738_RS01080 (235535) | 235535..236002 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| JI738_RS01085 (236067) | 236067..236798 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| JI738_RS01095 (237335) | 237335..238120 | + | 786 | WP_001086141.1 | lipoprotein | - |
| JI738_RS01100 (238257) | 238257..238736 | - | 480 | WP_001236645.1 | protein YkfM | - |
| JI738_RS01105 (238746) | 238746..239102 | - | 357 | Protein_213 | hypothetical protein | - |
| JI738_RS01110 (239100) | 239100..239378 | + | 279 | Protein_214 | ISAs1 family transposase | - |
| JI738_RS01115 (239419) | 239419..240189 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| JI738_RS01120 (240370) | 240370..240816 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| JI738_RS01125 (240859) | 240859..243303 | - | 2445 | WP_000973083.1 | hypothetical protein | VF |
| JI738_RS01130 (243543) | 243543..244121 | + | 579 | WP_000284050.1 | hypothetical protein | VF |
| JI738_RS01135 (244327) | 244327..245094 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| JI738_RS01140 (245065) | 245065..245805 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| JI738_RS01145 (245961) | 245961..246239 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| JI738_RS01150 (246242) | 246242..246502 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| JI738_RS01155 (246712) | 246712..247461 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
| JI738_RS01160 (247637) | 247637..248134 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| JI738_RS01165 (248358) | 248358..250070 | - | 1713 | Protein_225 | hypothetical protein | VF |
| JI738_RS01170 (250042) | 250042..250827 | + | 786 | WP_000207552.1 | hypothetical protein | VF |
| JI738_RS01175 (250898) | 250898..251953 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| JI738_RS01180 (252005) | 252005..252298 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JI738_RS01185 (252301) | 252301..252699 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JI738_RS01190 (252709) | 252709..253161 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| JI738_RS01195 (253479) | 253479..253685 | + | 207 | Protein_231 | RtcB family protein | - |
| JI738_RS01200 (253681) | 253681..254202 | + | 522 | Protein_232 | peptide chain release factor H | - |
| JI738_RS01205 (254259) | 254259..255716 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| JI738_RS01210 (255977) | 255977..256435 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (257031) | 257031..257111 | + | 81 | NuclAT_12 | - | - |
| - (257031) | 257031..257111 | + | 81 | NuclAT_12 | - | - |
| - (257031) | 257031..257111 | + | 81 | NuclAT_12 | - | - |
| - (257031) | 257031..257111 | + | 81 | NuclAT_12 | - | - |
| JI738_RS01215 (256527) | 256527..257771 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| JI738_RS01220 (257829) | 257829..258230 | + | 402 | WP_000174689.1 | sigma factor-binding protein Crl | - |
| JI738_RS01225 (258269) | 258269..259324 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| JI738_RS01230 (259612) | 259612..260715 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JI738_RS01235 (260727) | 260727..261980 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JI738_RS01245 (262552) | 262552..262893 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| JI738_RS01250 (262914) | 262914..263231 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| JI738_RS01255 (263250) | 263250..263471 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| JI738_RS01260 (263480) | 263480..263956 | - | 477 | WP_000811693.1 | RadC family protein | - |
| JI738_RS01265 (263972) | 263972..264430 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| JI738_RS01270 (264528) | 264528..264767 | - | 240 | WP_000194654.1 | DUF905 family protein | - |
| JI738_RS01275 (264844) | 264844..265311 | - | 468 | WP_001547765.1 | protein YkfB | - |
| JI738_RS01280 (265334) | 265334..265777 | - | 444 | WP_000824223.1 | lipoprotein YafY | - |
| JI738_RS01285 (265777) | 265777..265953 | - | 177 | WP_001285112.1 | hypothetical protein | - |
| JI738_RS01290 (266000) | 266000..266191 | - | 192 | Protein_249 | DeoR family transcriptional regulator | - |
| JI738_RS01295 (266408) | 266408..267229 | - | 822 | WP_000197389.1 | DUF932 domain-containing protein | - |
| JI738_RS01300 (267321) | 267321..268184 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| JI738_RS01305 (268513) | 268513..269406 | - | 894 | WP_000770246.1 | LysR substrate-binding domain-containing protein | - |
| JI738_RS01310 (269502) | 269502..269759 | + | 258 | Protein_253 | IS3 family transposase ISEc52 | Transposase |
| JI738_RS01315 (269827) | 269827..270978 | + | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| JI738_RS01320 (270988) | 270988..271413 | + | 426 | Protein_255 | IS3 family transposase | - |
| JI738_RS01325 (272086) | 272086..273177 | + | 1092 | Protein_256 | reverse transcriptase domain-containing protein | - |
| JI738_RS01330 (273325) | 273325..274305 | - | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| JI738_RS01335 (274549) | 274549..275952 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| JI738_RS01340 (275939) | 275939..276871 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| JI738_RS01345 (276980) | 276980..278026 | - | 1047 | WP_000192349.1 | hypothetical protein | VF |
| JI738_RS01350 (278038) | 278038..278385 | - | 348 | Protein_261 | ABC transporter permease subunit | - |
| JI738_RS01360 (279253) | 279253..279984 | + | 732 | WP_000388269.1 | protein YagJ | - |
| JI738_RS01365 (280075) | 280075..280701 | - | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| JI738_RS01370 (280973) | 280973..281671 | - | 699 | WP_001214248.1 | recombinase family protein | - |
| JI738_RS01375 (281698) | 281698..282552 | - | 855 | WP_000072039.1 | protein YagM | - |
| JI738_RS01380 (282671) | 282671..282895 | - | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| JI738_RS01385 (282892) | 282892..283332 | - | 441 | WP_000224818.1 | protein YagN | - |
| JI738_RS01390 (283449) | 283449..284849 | - | 1401 | WP_001407714.1 | hypothetical protein ; Integrase | Integrase |
| JI738_RS01395 (285134) | 285134..285472 | - | 339 | Protein_270 | LysR substrate-binding domain-containing protein | - |
| JI738_RS01400 (285523) | 285523..286479 | - | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| JI738_RS01405 (286489) | 286489..288687 | - | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| JI738_RS01410 (288684) | 288684..289640 | - | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|