MGE detailed information
MGE type: Prophage MGE length: 22443 bp
Accession: NZ_CP068279 Location: 1416675..1439117 Organism: Escherichia coli strain CY708 Replicon: chromosome
Accession: NZ_CP068279 Location: 1416675..1439117 Organism: Escherichia coli strain CY708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJW05_RS06705 (1412172) | 1412172..1412573 | + | 402 | WP_000174689.1 | sigma factor-binding protein Crl | - |
| JJW05_RS06710 (1412612) | 1412612..1413667 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| JJW05_RS06715 (1413955) | 1413955..1415058 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JJW05_RS06720 (1415070) | 1415070..1416323 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JJW05_RS06730 (1416895) | 1416895..1417236 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| JJW05_RS06735 (1417257) | 1417257..1417574 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| JJW05_RS06740 (1417593) | 1417593..1417814 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| JJW05_RS06745 (1417823) | 1417823..1418299 | - | 477 | WP_000811693.1 | RadC family protein | - |
| JJW05_RS06750 (1418315) | 1418315..1418773 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| JJW05_RS06755 (1418871) | 1418871..1419110 | - | 240 | WP_000194654.1 | DUF905 family protein | - |
| JJW05_RS06760 (1419187) | 1419187..1419654 | - | 468 | WP_001547765.1 | protein YkfB | - |
| JJW05_RS06765 (1419677) | 1419677..1420120 | - | 444 | WP_000824223.1 | lipoprotein YafY | - |
| JJW05_RS06770 (1420120) | 1420120..1420296 | - | 177 | WP_001285112.1 | hypothetical protein | - |
| JJW05_RS06775 (1420343) | 1420343..1420534 | - | 192 | Protein_1315 | DeoR family transcriptional regulator | - |
| JJW05_RS06780 (1420751) | 1420751..1421572 | - | 822 | WP_000197389.1 | DUF932 domain-containing protein | - |
| JJW05_RS06785 (1421664) | 1421664..1422527 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| JJW05_RS06790 (1422856) | 1422856..1423749 | - | 894 | WP_000770246.1 | LysR substrate-binding domain-containing protein | - |
| JJW05_RS06795 (1423845) | 1423845..1424102 | + | 258 | Protein_1319 | IS3 family transposase ISEc52 | Transposase |
| JJW05_RS06800 (1424170) | 1424170..1425321 | + | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| JJW05_RS06805 (1425331) | 1425331..1425756 | + | 426 | Protein_1321 | IS3 family transposase | - |
| JJW05_RS06810 (1426429) | 1426429..1427520 | + | 1092 | Protein_1322 | reverse transcriptase domain-containing protein | - |
| JJW05_RS06815 (1427668) | 1427668..1428648 | - | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| JJW05_RS06820 (1428892) | 1428892..1430295 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| JJW05_RS06825 (1430282) | 1430282..1431214 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| JJW05_RS06830 (1431323) | 1431323..1432369 | - | 1047 | WP_000192349.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| JJW05_RS06835 (1432381) | 1432381..1432728 | - | 348 | Protein_1327 | ABC transporter permease subunit | - |
| JJW05_RS06845 (1433596) | 1433596..1434327 | + | 732 | WP_000388269.1 | protein YagJ | - |
| JJW05_RS06850 (1434418) | 1434418..1435044 | - | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| JJW05_RS06855 (1435316) | 1435316..1436014 | - | 699 | WP_001214248.1 | recombinase family protein | - |
| JJW05_RS06860 (1436041) | 1436041..1436895 | - | 855 | WP_000072039.1 | protein YagM | - |
| JJW05_RS06865 (1437014) | 1437014..1437238 | - | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| JJW05_RS06870 (1437235) | 1437235..1437675 | - | 441 | WP_000224818.1 | protein YagN | - |
| JJW05_RS06875 (1437792) | 1437792..1439192 | - | 1401 | WP_001407714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JJW05_RS06880 (1439477) | 1439477..1439815 | - | 339 | Protein_1336 | LysR substrate-binding domain-containing protein | - |
| JJW05_RS06885 (1439866) | 1439866..1440822 | - | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| JJW05_RS06890 (1440832) | 1440832..1443030 | - | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| JJW05_RS06895 (1443027) | 1443027..1443983 | - | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|