MGE detailed information
MGE type: Genomic_island MGE length: 23810 bp
Accession: NZ_CP067232 Location: 1185681..1209490 Organism: Escherichia coli strain SBF45 Replicon: chromosome
Accession: NZ_CP067232 Location: 1185681..1209490 Organism: Escherichia coli strain SBF45 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB20_RS05660 (1182351) | 1182351..1183808 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| JJB20_RS05665 (1184045) | 1184045..1185562 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| JJB20_RS05670 (1185681) | 1185681..1185854 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JJB20_RS05675 (1185882) | 1185882..1186178 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JJB20_RS05680 (1186405) | 1186405..1186677 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| JJB20_RS05685 (1186890) | 1186890..1190819 | - | 3930 | WP_001542592.1 | Serine protease EspC | VF |
| JJB20_RS05690 (1191980) | 1191980..1192810 | - | 831 | WP_001088100.1 | AraC family transcriptional regulator | - |
| JJB20_RS05695 (1193717) | 1193717..1197553 | - | 3837 | WP_032141681.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| JJB20_RS05700 (1197903) | 1197903..1198424 | + | 522 | WP_032141680.1 | hypothetical protein | VF |
| JJB20_RS05705 (1198495) | 1198495..1200852 | + | 2358 | WP_032141679.1 | Outer membrane usher protein YraJ | VF |
| JJB20_RS05710 (1200845) | 1200845..1201546 | + | 702 | WP_032141678.1 | Chaperone protein FaeE | VF |
| JJB20_RS05715 (1201566) | 1201566..1202561 | + | 996 | WP_032142086.1 | fimbrial protein | - |
| JJB20_RS05720 (1202575) | 1202575..1203096 | + | 522 | WP_001542589.1 | hypothetical protein | VF |
| JJB20_RS05725 (1203089) | 1203089..1203607 | + | 519 | WP_003582778.1 | fimbrial family protein | - |
| JJB20_RS05730 (1203687) | 1203687..1204417 | + | 731 | Protein_1129 | IS3 family transposase ISKpn1 | Transposase |
| JJB20_RS05740 (1204547) | 1204547..1206610 | - | 2064 | WP_231368599.1 | peptidase domain-containing ABC transporter | - |
| JJB20_RS05745 (1206702) | 1206702..1207922 | - | 1221 | WP_032141676.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| JJB20_RS05750 (1207961) | 1207961..1208533 | - | 573 | WP_000661408.1 | hypothetical protein | - |
| JJB20_RS05755 (1208936) | 1208936..1209687 | + | 752 | Protein_1133 | IS3 family transposase | - |
| JJB20_RS05760 (1209816) | 1209816..1211447 | + | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| JJB20_RS05765 (1211444) | 1211444..1212163 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| JJB20_RS05770 (1212734) | 1212734..1214074 | + | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|