MGE detailed information
MGE type: IS/Tn MGE length: 165 bp
Accession: NZ_CP065946 Location: 1234339..1234503 Organism: Pectobacterium parmentieri strain WC19161 Replicon: chromosome
Accession: NZ_CP065946 Location: 1234339..1234503 Organism: Pectobacterium parmentieri strain WC19161 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JBL47_RS05640 () | 1231185..1231469 | + | 285 | WP_198482232.1 | DUF3892 domain-containing protein | - |
| JBL47_RS05645 () | 1231725..1231982 | + | 258 | WP_198482233.1 | hypothetical protein | - |
| JBL47_RS05650 () | 1231979..1232263 | + | 285 | WP_198482234.1 | conjugal transfer protein TraD | - |
| JBL47_RS05655 () | 1232455..1233702 | + | 1248 | Protein_1106 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| JBL47_RS05660 () | 1234339..1234517 | + | 179 | Protein_1107 | IS3 family transposase IS1400 | Transposase |
| JBL47_RS05665 () | 1234689..1235225 | + | 537 | WP_198482235.1 | SLATT domain-containing protein | - |
| JBL47_RS05670 () | 1235222..1236595 | + | 1374 | WP_198482236.1 | RNA-directed DNA polymerase | - |
| JBL47_RS05675 () | 1236782..1237294 | - | 513 | WP_198482237.1 | hypothetical protein | - |
| JBL47_RS05680 () | 1237418..1238935 | - | 1518 | WP_198482238.1 | RNA-directed DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|