MGE detailed information
MGE type: Prophage MGE length: 46753 bp
Accession: NZ_CP064328 Location: 1553916..1600668 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-14 Replicon: chromosome
Accession: NZ_CP064328 Location: 1553916..1600668 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD25_RS06975 () | 1550205..1550915 | + | 711 | WP_004088272.1 | epoxyqueuosine reductase QueH | - |
| IUD25_RS06980 () | 1550949..1551575 | + | 627 | WP_004088271.1 | nicotinamidase | - |
| IUD25_RS06985 () | 1551650..1553296 | - | 1647 | WP_004088270.1 | AMP-binding protein | - |
| IUD25_RS06990 () | 1553590..1553898 | - | 309 | WP_012382664.1 | lipid-A-disaccharide synthase N-terminal domain-containing protein | - |
| IUD25_RS06995 () | 1553916..1554638 | - | 723 | WP_004088269.1 | glycosyltransferase | - |
| IUD25_RS07000 () | 1554677..1555648 | - | 972 | WP_004088268.1 | UDP-N-acetylglucosamine 4-epimerase | VF |
| IUD25_RS07005 () | 1555955..1556887 | - | 933 | WP_004088267.1 | ParB/RepB/Spo0J family partition protein | - |
| IUD25_RS07010 () | 1556887..1557681 | - | 795 | WP_004088266.1 | Sporulation initiation inhibitor protein Soj | VF |
| IUD25_RS07015 () | 1557980..1558933 | - | 954 | WP_011098046.1 | MBL fold metallo-hydrolase | - |
| IUD25_RS07020 () | 1559734..1561014 | - | 1281 | WP_004088264.1 | serine--tRNA ligase | - |
| IUD25_RS07025 () | 1561136..1561831 | + | 696 | WP_004088263.1 | energy transducer TonB | - |
| IUD25_RS07030 () | 1562108..1563149 | - | 1042 | Protein_1368 | hypothetical protein ; Integrase | Integrase |
| IUD25_RS07035 () | 1563161..1563470 | - | 310 | Protein_1369 | DUF4224 domain-containing protein | - |
| IUD25_RS07040 () | 1563467..1563782 | - | 316 | Protein_1370 | hypothetical protein | - |
| IUD25_RS07045 () | 1563705..1564766 | + | 1062 | Protein_1371 | DNA polymerase | - |
| IUD25_RS07050 () | 1564765..1565151 | - | 387 | Protein_1372 | lysozyme | - |
| IUD25_RS07055 () | 1565252..1565983 | - | 732 | WP_004089563.1 | site-specific DNA-methyltransferase | - |
| IUD25_RS07060 () | 1566228..1566383 | - | 156 | WP_155115072.1 | hypothetical protein | - |
| IUD25_RS07065 () | 1566672..1568537 | + | 1866 | WP_004089558.1 | excinuclease ABC subunit UvrC | - |
| IUD25_RS07070 () | 1568534..1569163 | + | 630 | WP_004089556.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| IUD25_RS07080 () | 1569914..1570372 | - | 459 | WP_011098051.1 | hypothetical protein | - |
| IUD25_RS07085 () | 1570581..1571078 | - | 498 | WP_011098052.1 | hypothetical protein | - |
| IUD25_RS07090 () | 1571683..1572687 | + | 1005 | WP_004089540.1 | porphobilinogen synthase | - |
| IUD25_RS07095 () | 1573251..1573634 | - | 384 | WP_004089538.1 | VOC family protein | - |
| IUD25_RS07100 () | 1573785..1574162 | - | 378 | WP_004089535.1 | DUF2913 family protein | - |
| IUD25_RS07105 () | 1574162..1574865 | + | 704 | Protein_1382 | IS6 family transposase ISEas1 | Transposase |
| IUD25_RS07110 () | 1574997..1576331 | + | 1335 | WP_004089531.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| IUD25_RS07115 () | 1576427..1577281 | - | 855 | WP_011098055.1 | iron-sulfur cluster carrier protein ApbC | - |
| IUD25_RS07120 () | 1577773..1578546 | + | 774 | WP_004089528.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| IUD25_RS07125 () | 1578543..1579007 | + | 465 | WP_011098056.1 | Low molecular weight protein-tyrosine-phosphatase YfkJ | VF |
| IUD25_RS07130 () | 1578994..1579707 | - | 714 | WP_011098057.1 | site-specific DNA-methyltransferase | - |
| IUD25_RS07135 () | 1580058..1580339 | + | 282 | WP_011098058.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IUD25_RS07140 () | 1580349..1580648 | + | 300 | WP_004089519.1 | HigA family addiction module antidote protein | - |
| IUD25_RS07145 () | 1580828..1581163 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| IUD25_RS07150 () | 1581160..1581414 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| IUD25_RS07155 () | 1581467..1582165 | - | 699 | WP_011098059.1 | hypothetical protein | - |
| IUD25_RS07160 () | 1582294..1582755 | - | 462 | WP_011098060.1 | hypothetical protein | - |
| IUD25_RS07165 () | 1582752..1583515 | - | 764 | Protein_1394 | hypothetical protein | - |
| IUD25_RS07170 () | 1583421..1584527 | - | 1107 | WP_012382665.1 | YdaU family protein | - |
| IUD25_RS07175 () | 1584524..1584823 | - | 300 | WP_080513037.1 | hypothetical protein | - |
| IUD25_RS07180 () | 1584822..1585299 | + | 478 | Protein_1397 | conjugal transfer protein | - |
| IUD25_RS07185 () | 1585305..1585910 | + | 606 | WP_004091108.1 | hypothetical protein | VF |
| IUD25_RS07190 () | 1586448..1586895 | + | 448 | Protein_1399 | baseplate J/gp47 family protein | - |
| IUD25_RS07195 () | 1586897..1587574 | + | 678 | WP_004091097.1 | hypothetical protein | - |
| IUD25_RS07200 () | 1587493..1588004 | + | 512 | Protein_1401 | hypothetical protein | - |
| IUD25_RS07205 () | 1588246..1588506 | + | 261 | WP_014607365.1 | hypothetical protein | - |
| IUD25_RS07210 () | 1589021..1589260 | - | 240 | WP_004091081.1 | hypothetical protein | - |
| IUD25_RS07215 () | 1590109..1591437 | - | 1329 | WP_004091079.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| IUD25_RS07220 () | 1591526..1592650 | - | 1125 | WP_004091077.1 | prephenate dehydratase | - |
| IUD25_RS07225 () | 1592730..1593818 | - | 1089 | WP_011098070.1 | phosphoserine transaminase | - |
| IUD25_RS07230 () | 1594480..1595580 | + | 1101 | WP_194957351.1 | energy transducer TonB | - |
| IUD25_RS07235 () | 1595607..1596791 | - | 1185 | WP_011098072.1 | ABC transporter permease | - |
| IUD25_RS07240 () | 1596788..1597534 | - | 747 | WP_004091068.1 | ABC transporter ATP-binding protein NatA | VF |
| IUD25_RS07245 () | 1597531..1599066 | - | 1536 | WP_004091066.1 | alpha/beta hydrolase | - |
| IUD25_RS07250 () | 1599265..1599765 | - | 501 | WP_004091064.1 | dihydrofolate reductase | - |
| IUD25_RS07255 () | 1599874..1600668 | - | 795 | WP_011098074.1 | thymidylate synthase | - |
| IUD25_RS07260 () | 1600665..1601570 | - | 906 | WP_004091059.1 | prolipoprotein diacylglyceryl transferase | - |
| IUD25_RS07265 () | 1601657..1602037 | - | 381 | WP_004091057.1 | diacylglycerol kinase | - |
| IUD25_RS07270 () | 1602332..1603045 | - | 714 | WP_004085858.1 | response regulator transcription factor | - |
| IUD25_RS07275 () | 1603525..1604646 | - | 1122 | WP_011098075.1 | prephenate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|