MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93946 bp
Accession: NZ_CP064264 Location: 1..93946 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LT7 Replicon: plasmid pSLT7_1
Accession: NZ_CP064264 Location: 1..93946 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LT7 Replicon: plasmid pSLT7_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ITP16_RS23185 () | 22..585 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| ITP16_RS23190 () | 640..1380 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| ITP16_RS23195 () | 1400..6658 | - | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| ITP16_RS23200 () | 6740..6967 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| ITP16_RS23205 () | 6967..7365 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| ITP16_RS23210 () | 7374..9626 | - | 2253 | WP_103103873.1 | type IV conjugative transfer system coupling protein TraD | - |
| ITP16_RS23215 () | 10003..10734 | - | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| ITP16_RS23220 () | 10770..11264 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| ITP16_RS23225 () | 11280..14102 | - | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| ITP16_RS23230 () | 14099..15481 | - | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| ITP16_RS23235 () | 15471..16019 | - | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| ITP16_RS23240 () | 16006..16299 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| ITP16_RS23245 () | 16513..17262 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| ITP16_RS23250 () | 17274..17489 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| ITP16_RS23255 () | 17500..19326 | - | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| ITP16_RS23260 () | 19323..19742 | - | 420 | WP_001229397.1 | HNH endonuclease | - |
| ITP16_RS23265 () | 19779..20417 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| ITP16_RS23270 () | 20402..20641 | - | 240 | WP_001197741.1 | hypothetical protein | - |
| ITP16_RS23275 () | 20728..21720 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| ITP16_RS23280 () | 21717..22349 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| ITP16_RS23285 () | 22346..22732 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| ITP16_RS23290 () | 22707..25355 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| ITP16_RS23295 () | 25371..25634 | - | 264 | WP_001239256.1 | hypothetical protein | - |
| ITP16_RS23300 () | 25751..26218 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| ITP16_RS23305 () | 26211..26432 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| ITP16_RS23310 () | 26567..27082 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| ITP16_RS23315 () | 27079..27324 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| ITP16_RS23320 () | 27302..27898 | - | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| ITP16_RS23325 () | 27888..29309 | - | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| ITP16_RS23330 () | 29309..30049 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| ITP16_RS23335 () | 30036..30602 | - | 567 | WP_000399769.1 | type IV conjugative transfer system protein TraE | - |
| ITP16_RS23340 () | 30624..30935 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| ITP16_RS23345 () | 30950..31312 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| ITP16_RS23350 () | 31354..31581 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| ITP16_RS23355 () | 31675..32361 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| ITP16_RS23360 () | 32554..32934 | - | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| ITP16_RS23365 () | 33349..33819 | + | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| ITP16_RS23370 () | 34130..34948 | - | 819 | Protein_37 | DUF945 domain-containing protein | - |
| ITP16_RS23375 () | 35051..35209 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| ITP16_RS23380 () | 35458..36195 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| ITP16_RS23385 () | 36192..36626 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| ITP16_RS23390 () | 36666..38663 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| ITP16_RS23395 () | 38732..38974 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| ITP16_RS23400 () | 39029..39547 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| ITP16_RS23405 () | 40141..40314 | - | 174 | WP_155522194.1 | hypothetical protein | - |
| ITP16_RS23410 () | 40278..40601 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| ITP16_RS23415 () | 40837..41271 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| ITP16_RS23420 () | 41338..41772 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| ITP16_RS23425 () | 42268..43032 | - | 765 | WP_001246548.1 | membrane protein | - |
| ITP16_RS23430 () | 43104..43517 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| ITP16_RS23435 () | 43573..43794 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| ITP16_RS23440 () | 43794..44474 | - | 681 | WP_000088645.1 | DNA methylase | - |
| ITP16_RS23445 () | 44856..45212 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| ITP16_RS23450 () | 45205..45675 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| ITP16_RS23455 () | 46186..46608 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| ITP16_RS23460 () | 46608..47882 | + | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| ITP16_RS23465 () | 47964..48938 | - | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| ITP16_RS23470 () | 48938..50143 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| ITP16_RS23475 () | 50558..51499 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| ITP16_RS23480 () | 51531..52097 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| ITP16_RS23485 () | 52154..52489 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| ITP16_RS23490 () | 52673..53089 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| ITP16_RS23495 () | 53175..54290 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| ITP16_RS23500 () | 54549..55037 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| ITP16_RS23505 () | 55692..56432 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| ITP16_RS23510 () | 56639..57199 | + | 561 | WP_001240331.1 | recombinase family protein | - |
| ITP16_RS23515 () | 57183..58847 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| ITP16_RS23520 () | 58780..59805 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| ITP16_RS23525 () | 59994..61031 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| ITP16_RS23530 () | 61640..62533 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| ITP16_RS23535 () | 62707..62871 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| ITP16_RS23540 () | 63045..63812 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| ITP16_RS23545 () | 63775..63942 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| ITP16_RS23550 () | 63994..65769 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| ITP16_RS23555 () | 66051..66776 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| ITP16_RS23560 () | 67037..67687 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| ITP16_RS23565 () | 67814..68238 | - | 425 | Protein_76 | IS200/IS605 family transposase | - |
| ITP16_RS23570 () | 68295..68645 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| ITP16_RS23575 () | 68712..69272 | - | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| ITP16_RS23580 () | 69428..69715 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| ITP16_RS23585 () | 69992..70477 | - | 486 | WP_000905606.1 | membrane protein | - |
| ITP16_RS23590 () | 70471..70980 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| ITP16_RS23595 () | 70984..71697 | - | 714 | Protein_82 | EAL domain-containing protein | - |
| ITP16_RS23600 () | 71706..72488 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| ITP16_RS23605 () | 72523..73044 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| ITP16_RS23610 () | 73041..73331 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| ITP16_RS23615 () | 73333..73638 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| ITP16_RS23620 () | 73640..73858 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| ITP16_RS23625 () | 74534..75055 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| ITP16_RS23630 () | 75539..75835 | + | 297 | WP_001687482.1 | hypothetical protein | - |
| ITP16_RS23635 () | 76329..77318 | + | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| ITP16_RS23640 () | 77577..78021 | - | 445 | Protein_91 | site-specific integrase | - |
| ITP16_RS23645 () | 78190..78571 | - | 382 | Protein_92 | YgiW/YdeI family stress tolerance OB fold protein | - |
| ITP16_RS23650 () | 79290..79592 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| ITP16_RS23655 () | 79867..80385 | + | 519 | WP_000748205.1 | major pilin PefA | - |
| ITP16_RS23660 () | 80613..83017 | + | 2405 | Protein_95 | outer membrane usher protein PefC | - |
| ITP16_RS23665 () | 83010..83702 | + | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| ITP16_RS23670 () | 83717..84273 | + | 557 | Protein_97 | hypothetical protein | - |
| ITP16_RS23675 () | 84526..85401 | + | 876 | WP_014343944.1 | hypothetical protein | - |
| ITP16_RS23680 () | 85833..86045 | + | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| ITP16_RS23685 () | 86030..86380 | + | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| ITP16_RS23690 () | 86625..87278 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| ITP16_RS23695 () | 87268..87414 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| ITP16_RS23700 () | 87411..88310 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| ITP16_RS23705 () | 88400..88957 | + | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| ITP16_RS23710 () | 89223..89981 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| ITP16_RS23715 () | 90078..90299 | - | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| ITP16_RS23720 () | 91159..92040 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| ITP16_RS23725 () | 92021..92098 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| ITP16_RS23730 () | 92348..92614 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| ITP16_RS23735 () | 92793..93235 | - | 443 | Protein_110 | phospholipase | - |
| ITP16_RS23740 () | 93401..93556 | - | 156 | WP_000983042.1 | hypothetical protein | - |
| ITP16_RS23745 () | 93569..93853 | - | 285 | WP_000477658.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|