MGE detailed information
MGE type: Genomic_island MGE length: 43700 bp
Accession: NZ_CP064037 Location: 877080..920779 Organism: Vibrio parahaemolyticus strain XMM117 Replicon: chromosome
Accession: NZ_CP064037 Location: 877080..920779 Organism: Vibrio parahaemolyticus strain XMM117 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9J99_RS04080 (H9J99_04050) | 872217..873764 | - | 1548 | WP_005464242.1 | alanine/glycine:cation symporter family protein | - |
| H9J99_RS04085 (H9J99_04055) | 874069..875325 | - | 1257 | WP_248339836.1 | D-amino acid dehydrogenase | - |
| H9J99_RS04090 (H9J99_04060) | 875433..876353 | + | 921 | WP_065769817.1 | LysR substrate-binding domain-containing protein | - |
| H9J99_RS04095 (H9J99_04065) | 876506..877078 | + | 573 | WP_069543100.1 | hypothetical protein | - |
| H9J99_RS04100 (H9J99_04070) | 877080..878222 | + | 1143 | WP_228070175.1 | lipase family protein | - |
| H9J99_RS04105 (H9J99_04075) | 878377..880122 | - | 1746 | WP_045607393.1 | amidohydrolase | - |
| H9J99_RS04110 (H9J99_04080) | 880415..881683 | + | 1269 | WP_020840164.1 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | - |
| H9J99_RS04115 (H9J99_04085) | 881892..883223 | + | 1332 | WP_068864774.1 | aspartate aminotransferase family protein | - |
| H9J99_RS04120 (H9J99_04090) | 883214..884053 | + | 840 | WP_068864776.1 | 3-keto-5-aminohexanoate cleavage protein | - |
| H9J99_RS04125 (H9J99_04095) | 884129..885496 | - | 1368 | WP_045607388.1 | Na+/H+ antiporter NhaC family protein | - |
| H9J99_RS04130 (H9J99_04100) | 885663..886250 | - | 588 | WP_031791282.1 | DedA family protein | - |
| H9J99_RS04135 (H9J99_04105) | 886473..888005 | - | 1533 | WP_005464264.1 | bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein | - |
| H9J99_RS04140 (H9J99_04110) | 888141..889031 | - | 891 | WP_045607387.1 | LysR family transcriptional regulator | - |
| H9J99_RS04145 (H9J99_04115) | 889432..889995 | + | 564 | WP_015296308.1 | porin family protein | - |
| H9J99_RS04150 (H9J99_04120) | 890778..891260 | - | 483 | WP_029786578.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| H9J99_RS04155 (H9J99_04125) | 891245..892606 | - | 1362 | WP_062851242.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| H9J99_RS04160 (H9J99_04130) | 893097..893879 | - | 783 | WP_031428771.1 | metallophosphoesterase | - |
| H9J99_RS04165 (H9J99_04135) | 894496..894882 | - | 387 | WP_062851243.1 | hypothetical protein | - |
| H9J99_RS04170 (H9J99_04140) | 897654..899642 | + | 1989 | WP_040111190.1 | AAA family ATPase | - |
| H9J99_RS04175 (H9J99_04145) | 899639..900298 | + | 660 | WP_040111191.1 | hypothetical protein | - |
| H9J99_RS04180 (H9J99_04150) | 900576..901115 | - | 540 | WP_062851245.1 | hypothetical protein | - |
| H9J99_RS04185 (H9J99_04155) | 901799..902086 | + | 288 | WP_043854181.1 | hypothetical protein | - |
| H9J99_RS04190 (H9J99_04160) | 902326..903535 | + | 1210 | Protein_799 | IS4-like element ISVsa5 family transposase | - |
| H9J99_RS04195 (H9J99_04165) | 904056..904646 | + | 591 | WP_025795013.1 | recombinase family protein | - |
| H9J99_RS04200 (H9J99_04170) | 904848..905819 | + | 972 | WP_248339834.1 | hypothetical protein | - |
| H9J99_RS04205 (H9J99_04175) | 906749..907744 | - | 996 | WP_222771436.1 | hypothetical protein | - |
| H9J99_RS04210 (H9J99_04180) | 907747..909504 | - | 1758 | WP_228086017.1 | restriction endonuclease subunit S | - |
| H9J99_RS04215 (H9J99_04185) | 909504..910994 | - | 1491 | WP_228086018.1 | N-6 DNA methylase | - |
| H9J99_RS04220 (H9J99_04190) | 911160..911558 | + | 399 | WP_228086019.1 | hypothetical protein | - |
| H9J99_RS04225 (H9J99_04195) | 911719..911868 | - | 150 | WP_017790133.1 | hypothetical protein | - |
| H9J99_RS04230 (H9J99_04200) | 911944..912309 | + | 366 | WP_228086020.1 | elongation factor Ts | - |
| H9J99_RS04235 (H9J99_04205) | 912983..913639 | + | 657 | WP_228086021.1 | site-specific DNA-methyltransferase | - |
| H9J99_RS04240 (H9J99_04210) | 913707..916184 | - | 2478 | WP_248365251.1 | DEAD/DEAH box helicase family protein | - |
| H9J99_RS04245 (H9J99_04215) | 916319..918739 | - | 2421 | WP_228086007.1 | hypothetical protein | - |
| H9J99_RS04250 (H9J99_04220) | 918877..919155 | - | 279 | WP_000115789.1 | AlpA family phage regulatory protein | - |
| H9J99_RS04255 (H9J99_04225) | 919553..920779 | - | 1227 | WP_228086008.1 | integrase domain-containing protein | - |
| H9J99_RS04265 (H9J99_04235) | 921398..921883 | - | 486 | WP_005455975.1 | SsrA-binding protein SmpB | - |
| H9J99_RS04270 (H9J99_04240) | 922002..922445 | + | 444 | WP_005381641.1 | SRPBCC family protein | - |
| H9J99_RS04275 (H9J99_04245) | 922435..922782 | + | 348 | WP_005456005.1 | RnfH family protein | - |
| H9J99_RS04280 (H9J99_04250) | 922882..923241 | - | 360 | WP_005455981.1 | outer membrane protein assembly factor BamE | - |
| H9J99_RS04285 (H9J99_04255) | 923481..925145 | - | 1665 | WP_005456006.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|