MGE detailed information
MGE type: Conjugative plasmid MGE length: 142252 bp
Accession: NZ_CP063749 Location: 1..142252 Organism: Klebsiella pneumoniae strain KP19-3023 Replicon: plasmid pKP19-3023-142k
Accession: NZ_CP063749 Location: 1..142252 Organism: Klebsiella pneumoniae strain KP19-3023 Replicon: plasmid pKP19-3023-142k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMY55_RS27960 () | 1..1020 | + | 1020 | WP_009652816.1 | replication initiation protein | - |
| IMY55_RS27965 () | 2005..2184 | + | 180 | Protein_2 | SOS response-associated peptidase | - |
| IMY55_RS27970 () | 2514..5321 | - | 2808 | WP_040228250.1 | DEAD/DEAH box helicase family protein | - |
| IMY55_RS27975 () | 5331..5831 | - | 501 | WP_040228248.1 | hypothetical protein | - |
| IMY55_RS27980 () | 5831..9046 | - | 3216 | WP_040228246.1 | DUF1156 domain-containing protein | - |
| IMY55_RS27985 () | 9057..10850 | - | 1794 | WP_064176592.1 | ATP-binding protein | - |
| IMY55_RS27990 () | 10858..11934 | - | 1077 | WP_040228241.1 | SIR2 family protein | - |
| IMY55_RS27995 () | 11941..12960 | - | 1020 | WP_040227127.1 | hypothetical protein | - |
| IMY55_RS28000 () | 12960..15077 | - | 2118 | WP_088903447.1 | DUF499 domain-containing protein | - |
| IMY55_RS28005 () | 15456..16073 | + | 618 | Protein_10 | replication protein | - |
| IMY55_RS28010 () | 16607..16885 | + | 279 | WP_013213990.1 | hypothetical protein | - |
| IMY55_RS28015 () | 16996..17421 | + | 426 | WP_013213989.1 | antirestriction protein | - |
| IMY55_RS28020 () | 17549..17704 | + | 156 | WP_013213988.1 | hypothetical protein | - |
| IMY55_RS28025 () | 17750..18046 | + | 297 | WP_013213987.1 | transcriptional regulator | - |
| IMY55_RS28030 () | 18150..19031 | + | 882 | Protein_15 | IS1182 family transposase ISKpn6 | Transposase |
| IMY55_RS28035 () | 19281..20162 | - | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| IMY55_RS28040 () | 20438..21418 | - | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| IMY55_RS28045 () | 21541..22098 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| IMY55_RS28050 () | 22261..25266 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IMY55_RS28055 () | 25313..25654 | + | 342 | WP_088903446.1 | HNH endonuclease | - |
| IMY55_RS28060 () | 25692..25970 | + | 279 | WP_020314648.1 | hypothetical protein | - |
| IMY55_RS28065 () | 26288..26899 | + | 612 | WP_020804876.1 | DUF2913 family protein | - |
| IMY55_RS28070 () | 26896..27849 | - | 954 | WP_020314639.1 | Recombination-promoting nuclease RpnA | VF |
| IMY55_RS28075 () | 27974..28237 | - | 264 | WP_088903441.1 | hypothetical protein | - |
| IMY55_RS28080 () | 28257..28877 | - | 621 | WP_020314642.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IMY55_RS28085 () | 29286..30689 | + | 1404 | WP_164722696.1 | DNA cytosine methyltransferase | - |
| IMY55_RS28090 () | 30724..31938 | - | 1215 | WP_148237948.1 | type II restriction endonuclease | - |
| IMY55_RS28095 () | 32246..34999 | + | 2754 | WP_075606932.1 | ABC transporter | - |
| IMY55_RS28100 () | 35105..35701 | - | 597 | WP_032635043.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| IMY55_RS28105 () | 35954..36472 | - | 519 | WP_088903439.1 | hypothetical protein | - |
| IMY55_RS28110 () | 37377..38003 | + | 627 | WP_022644718.1 | ParA family protein | - |
| IMY55_RS28115 () | 38048..38275 | + | 228 | WP_020314634.1 | hypothetical protein | - |
| IMY55_RS28120 () | 38450..39724 | - | 1275 | WP_020314652.1 | Y-family DNA polymerase | - |
| IMY55_RS28125 () | 39736..40185 | - | 450 | WP_046960466.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IMY55_RS28130 () | 40182..40427 | - | 246 | WP_020314635.1 | DinI-like family protein | - |
| IMY55_RS28135 () | 40631..40861 | + | 231 | WP_020314631.1 | hypothetical protein | - |
| IMY55_RS28140 () | 41031..41224 | + | 194 | Protein_37 | hypothetical protein | - |
| IMY55_RS28145 () | 41296..41886 | + | 591 | Protein_38 | DNA methylase | - |
| IMY55_RS28150 () | 41916..44813 | - | 2898 | WP_023307208.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| IMY55_RS28155 () | 44908..45513 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| IMY55_RS28160 () | 46173..47354 | + | 1182 | WP_004194048.1 | Na+/H+ antiporter NhaA | - |
| IMY55_RS28165 () | 47781..48095 | - | 315 | WP_000091613.1 | hypothetical protein | - |
| IMY55_RS28170 () | 48350..48706 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| IMY55_RS28175 () | 48696..49097 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| IMY55_RS28180 () | 49094..49384 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| IMY55_RS28185 () | 49459..52425 | + | 2967 | WP_003100881.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| IMY55_RS28190 () | 52504..53508 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| IMY55_RS28195 () | 53690..53893 | - | 204 | WP_004197809.1 | hypothetical protein | - |
| IMY55_RS28200 () | 53907..54110 | - | 204 | WP_004197808.1 | hemolysin expression modulator Hha | - |
| IMY55_RS28205 () | 54144..54512 | - | 369 | WP_004197807.1 | hypothetical protein | - |
| IMY55_RS28210 () | 54556..55050 | - | 495 | WP_020805591.1 | hypothetical protein | - |
| IMY55_RS28215 () | 55081..55653 | - | 573 | WP_020805590.1 | hypothetical protein | - |
| IMY55_RS28220 () | 55650..55898 | - | 249 | WP_000272716.1 | hypothetical protein | - |
| IMY55_RS28225 () | 56335..57024 | + | 690 | WP_020315560.1 | RES family NAD+ phosphorylase | - |
| IMY55_RS28230 () | 57056..57745 | - | 690 | WP_004193995.1 | hypothetical protein | - |
| IMY55_RS28235 () | 58012..58267 | + | 256 | Protein_56 | hypothetical protein | - |
| IMY55_RS28240 () | 58995..59243 | + | 249 | WP_053389907.1 | hypothetical protein | - |
| IMY55_RS28245 () | 59297..59911 | - | 615 | WP_053389911.1 | hypothetical protein | - |
| IMY55_RS28250 () | 60421..60675 | + | 255 | Protein_59 | hypothetical protein | - |
| IMY55_RS28255 () | 60845..61063 | + | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IMY55_RS28260 () | 61065..61370 | + | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IMY55_RS28265 () | 61539..61934 | + | 396 | WP_162269742.1 | hypothetical protein | - |
| IMY55_RS28270 () | 61961..62275 | + | 315 | WP_053389906.1 | hypothetical protein | - |
| IMY55_RS28275 () | 62286..63302 | + | 1017 | WP_017899884.1 | hypothetical protein | - |
| IMY55_RS28280 () | 63500..64294 | + | 795 | WP_053389905.1 | site-specific integrase | - |
| IMY55_RS28285 () | 64734..64913 | - | 180 | WP_006788217.1 | hypothetical protein | - |
| IMY55_RS28290 () | 65033..65659 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| IMY55_RS28295 () | 66268..67143 | - | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
| IMY55_RS28300 () | 67555..68826 | - | 1272 | WP_053390143.1 | Y-family DNA polymerase | - |
| IMY55_RS28305 () | 68826..69257 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IMY55_RS28310 () | 69663..71150 | + | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| IMY55_RS28315 () | 71399..72370 | + | 972 | WP_004152353.1 | mediator of plasmid stability | - |
| IMY55_RS28320 () | 72373..73044 | + | 672 | WP_053390142.1 | plasmid partitioning/stability family protein | - |
| IMY55_RS28325 () | 73108..73338 | + | 231 | WP_023329036.1 | hypothetical protein | - |
| IMY55_RS28330 () | 73775..74476 | + | 702 | WP_004152355.1 | DNA methylase | - |
| IMY55_RS28335 () | 74476..74697 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| IMY55_RS28340 () | 74707..75126 | + | 420 | WP_053390283.1 | DUF1380 domain-containing protein | - |
| IMY55_RS28345 () | 75180..75947 | + | 768 | WP_110522032.1 | hypothetical protein | - |
| IMY55_RS28350 () | 76628..77056 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| IMY55_RS28355 () | 77099..77605 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| IMY55_RS28360 () | 77648..77839 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| IMY55_RS28365 () | 78027..78281 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| IMY55_RS28370 () | 78316..78636 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| IMY55_RS28375 () | 79316..79543 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| IMY55_RS28380 () | 79635..79865 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| IMY55_RS28385 () | 79917..81272 | + | 1356 | WP_053390261.1 | DUF3560 domain-containing protein | - |
| IMY55_RS28390 () | 81320..81883 | + | 564 | WP_004152756.1 | methyltransferase | - |
| IMY55_RS28395 () | 82714..83256 | + | 543 | WP_014343512.1 | single-stranded DNA-binding protein | - |
| IMY55_RS28400 () | 83305..83553 | + | 249 | WP_009310026.1 | DUF905 domain-containing protein | - |
| IMY55_RS28405 () | 83623..85680 | + | 2058 | WP_009310025.1 | ParB/RepB/Spo0J family partition protein | - |
| IMY55_RS28410 () | 85725..86156 | + | 432 | WP_020804497.1 | conjugation system SOS inhibitor PsiB | - |
| IMY55_RS28415 () | 86153..86881 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| IMY55_RS28420 () | 86878..87204 | + | 327 | WP_001568059.1 | hypothetical protein | - |
| IMY55_RS28425 () | 87260..87634 | + | 375 | WP_023280872.1 | hypothetical protein | - |
| IMY55_RS28430 () | 87835..89210 | + | 1376 | WP_100250078.1 | IS3 family transposase ISKpn8 | Transposase |
| IMY55_RS28435 () | 89380..90420 | + | 1041 | WP_009310020.1 | ATP-binding protein | - |
| IMY55_RS28440 () | 90626..92908 | + | 2283 | WP_162859354.1 | S8 family peptidase | - |
| IMY55_RS28445 () | 93284..93442 | + | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| IMY55_RS28450 () | 93808..94212 | + | 405 | WP_053390087.1 | IS66 family transposase ISKpn24 | Transposase |
| IMY55_RS28455 () | 94209..94556 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| IMY55_RS28460 () | 94605..96143 | + | 1539 | WP_048213845.1 | IS66 family transposase ISKpn24 | Transposase |
| IMY55_RS28465 () | 96602..96874 | + | 273 | WP_023287105.1 | hypothetical protein | - |
| IMY55_RS28470 () | 96871..97221 | + | 351 | WP_023287104.1 | hypothetical protein | - |
| IMY55_RS28475 () | 97853..98209 | + | 357 | WP_019706019.1 | hypothetical protein | - |
| IMY55_RS28480 () | 98270..98482 | + | 213 | WP_019706020.1 | hypothetical protein | - |
| IMY55_RS28485 () | 98493..98717 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| IMY55_RS28490 () | 98798..99118 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IMY55_RS28495 () | 99108..99386 | + | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| IMY55_RS28500 () | 99387..99800 | + | 414 | WP_023287139.1 | helix-turn-helix domain-containing protein | - |
| IMY55_RS28505 () | 100630..101451 | + | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| IMY55_RS28510 () | 101484..101813 | + | 330 | WP_053390269.1 | hypothetical protein | - |
| IMY55_RS28515 () | 101846..102331 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| IMY55_RS28520 () | 102765..103157 | + | 393 | WP_053390193.1 | relaxosome protein TraM | - |
| IMY55_RS28525 () | 103395..104096 | + | 702 | WP_094898581.1 | hypothetical protein | - |
| IMY55_RS28530 () | 104257..104418 | + | 162 | WP_172686697.1 | TraY domain-containing protein | - |
| IMY55_RS28535 () | 104483..104851 | + | 369 | WP_064386081.1 | type IV conjugative transfer system pilin TraA | - |
| IMY55_RS28540 () | 104865..105170 | + | 306 | WP_064343526.1 | type IV conjugative transfer system protein TraL | - |
| IMY55_RS28545 () | 105186..105752 | + | 567 | WP_064359954.1 | type IV conjugative transfer system protein TraE | - |
| IMY55_RS28550 () | 105739..106473 | + | 735 | WP_064343528.1 | type-F conjugative transfer system secretin TraK | - |
| IMY55_RS28555 () | 106473..107894 | + | 1422 | WP_053390199.1 | conjugal transfer protein TraB | - |
| IMY55_RS28560 () | 107887..108321 | + | 435 | WP_020322358.1 | TraP protein | - |
| IMY55_RS28565 () | 108355..108939 | + | 585 | WP_064343530.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IMY55_RS28570 () | 109552..109740 | + | 189 | WP_053390286.1 | hypothetical protein | - |
| IMY55_RS28575 () | 110007..110225 | + | 219 | WP_087498964.1 | hypothetical protein | - |
| IMY55_RS28580 () | 110222..110521 | + | 300 | WP_181726264.1 | hypothetical protein | - |
| IMY55_RS28585 () | 110609..110992 | + | 384 | WP_042946290.1 | hypothetical protein | - |
| IMY55_RS28590 () | 111085..113724 | + | 2640 | WP_064343533.1 | type IV secretion system protein TraC | - |
| IMY55_RS28595 () | 113724..114116 | + | 393 | WP_064343534.1 | type-F conjugative transfer system protein TrbI | - |
| IMY55_RS28600 () | 114113..114739 | + | 627 | WP_064343535.1 | type-F conjugative transfer system protein TraW | - |
| IMY55_RS28605 () | 114750..115742 | + | 993 | WP_053390276.1 | conjugal transfer pilus assembly protein TraU | - |
| IMY55_RS28610 () | 115755..116402 | + | 648 | WP_064343536.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IMY55_RS28615 () | 116399..116782 | + | 384 | WP_053390297.1 | hypothetical protein | - |
| IMY55_RS28620 () | 116779..118734 | + | 1956 | WP_064343537.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IMY55_RS28625 () | 118766..119026 | + | 261 | WP_053390216.1 | hypothetical protein | - |
| IMY55_RS28630 () | 119019..119630 | + | 612 | WP_053390217.1 | hypothetical protein | - |
| IMY55_RS28635 () | 119620..119862 | + | 243 | WP_053390218.1 | conjugal transfer protein TrbE | - |
| IMY55_RS28640 () | 119908..120234 | + | 327 | WP_053390219.1 | hypothetical protein | - |
| IMY55_RS28645 () | 120255..121007 | + | 753 | WP_053390220.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IMY55_RS28650 () | 121018..121254 | + | 237 | WP_053390221.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IMY55_RS28655 () | 121229..121789 | + | 561 | WP_039698500.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IMY55_RS28660 () | 121776..123146 | + | 1371 | WP_075606918.1 | conjugal transfer protein TraH | - |
| IMY55_RS28665 () | 123146..126025 | + | 2880 | WP_064386194.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IMY55_RS28670 () | 126042..126710 | + | 669 | WP_128317877.1 | hypothetical protein | - |
| IMY55_RS28675 () | 127069..127800 | + | 732 | WP_064386198.1 | complement resistance protein TraT | - |
| IMY55_RS28680 () | 128298..128684 | + | 387 | WP_053390238.1 | hypothetical protein | - |
| IMY55_RS28685 () | 128803..131121 | + | 2319 | WP_075606915.1 | type IV conjugative transfer system coupling protein TraD | - |
| IMY55_RS28690 () | 131121..136379 | + | 5259 | WP_075606914.1 | Multifunctional conjugation protein TraI | Relaxase |
| IMY55_RS28695 () | 136462..137187 | + | 726 | WP_064386205.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| IMY55_RS28700 () | 137344..137934 | + | 591 | WP_009651737.1 | fertility inhibition protein FinO | - |
| IMY55_RS28705 () | 138084..138875 | + | 792 | WP_075606913.1 | DsbA family protein | - |
| IMY55_RS28710 () | 139005..139601 | + | 597 | WP_042927543.1 | hypothetical protein | - |
| IMY55_RS28715 () | 139671..140315 | + | 645 | WP_042927545.1 | hypothetical protein | - |
| IMY55_RS28720 () | 140371..140997 | + | 627 | WP_009652809.1 | DUF2726 domain-containing protein | - |
| IMY55_RS28725 () | 140994..141560 | + | 567 | WP_052544827.1 | Phospholipase D | VF |
| IMY55_RS28730 () | 141693..141959 | + | 267 | WP_042927547.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|