MGE detailed information
MGE type: Conjugative plasmid MGE length: 69098 bp
Accession: NZ_CP063517 Location: 1..69098 Organism: Escherichia coli strain EH01-18-04-A Replicon: plasmid pEH01-18-04-A_2
Accession: NZ_CP063517 Location: 1..69098 Organism: Escherichia coli strain EH01-18-04-A Replicon: plasmid pEH01-18-04-A_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS17_RS25425 () | 104..388 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IQS17_RS25430 () | 375..920 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IQS17_RS25435 () | 850..1197 | + | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| IQS17_RS25440 () | 1145..1570 | + | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| IQS17_RS25445 () | 1557..2930 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| IQS17_RS25450 () | 2927..5752 | + | 2826 | WP_012881124.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IQS17_RS25455 () | 5749..6258 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| IQS17_RS25460 () | 6272..7003 | + | 732 | WP_012881123.1 | complement resistance protein TraT | - |
| IQS17_RS25465 () | 7206..7943 | + | 738 | WP_012881122.1 | hypothetical protein | - |
| IQS17_RS25470 () | 7994..10246 | + | 2253 | WP_078207383.1 | type IV conjugative transfer system coupling protein TraD | - |
| IQS17_RS25475 () | 10246..15516 | + | 5271 | WP_117389472.1 | Multifunctional conjugation protein TraI | Relaxase |
| IQS17_RS25480 () | 15536..16282 | + | 747 | WP_059338983.1 | conjugal transfer pilus acetylase TraX | - |
| IQS17_RS25485 () | 16341..17201 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| IQS17_RS25490 () | 17304..17864 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| IQS17_RS25495 () | 17993..18205 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| IQS17_RS25500 () | 18450..18911 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| IQS17_RS25505 () | 18957..19166 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| IQS17_RS25510 () | 19204..19794 | + | 591 | WP_033807967.1 | DUF2726 domain-containing protein | - |
| IQS17_RS25515 () | 19949..20422 | + | 474 | WP_016240489.1 | hypothetical protein | - |
| - () | 20565..20624 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 20565..20624 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 20565..20624 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 20565..20624 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| IQS17_RS25520 () | 20669..20818 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IQS17_RS25525 () | 21103..21351 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| IQS17_RS25530 () | 21596..21670 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| IQS17_RS25535 () | 21663..22520 | + | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| IQS17_RS25540 () | 23221..23433 | + | 213 | WP_094189089.1 | hypothetical protein | - |
| IQS17_RS25545 () | 23548..23856 | - | 309 | Protein_24 | IS91 family transposase ISSbo1 | Transposase |
| IQS17_RS25550 () | 24049..24147 | + | 99 | WP_137491101.1 | transposase | - |
| IQS17_RS25555 () | 24297..24554 | - | 258 | WP_167791825.1 | hypothetical protein | - |
| IQS17_RS25560 () | 24584..25354 | - | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| IQS17_RS25565 () | 25365..25964 | - | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
| IQS17_RS25570 () | 26106..26828 | + | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| IQS17_RS25575 () | 26825..28297 | + | 1473 | WP_000621194.1 | sensor histidine kinase | - |
| IQS17_RS25580 () | 28675..28842 | - | 168 | Protein_31 | IS110 family transposase | - |
| IQS17_RS25585 () | 28896..29600 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS17_RS25590 () | 29735..29830 | + | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| IQS17_RS25595 () | 29956..30693 | + | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| IQS17_RS25600 () | 30638..30808 | + | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| IQS17_RS25605 () | 31456..32153 | + | 698 | Protein_36 | IS1 family transposase IS1R | Transposase |
| IQS17_RS25610 () | 33602..33836 | + | 235 | Protein_37 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IQS17_RS25615 () | 33964..34245 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| IQS17_RS25620 () | 34368..34718 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| IQS17_RS25625 () | 34721..35683 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| IQS17_RS25630 () | 35830..36123 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| IQS17_RS25635 () | 36200..36883 | + | 684 | WP_000085883.1 | DNA methylase | - |
| IQS17_RS25640 () | 36884..37105 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| IQS17_RS25645 () | 37119..37553 | + | 435 | WP_015058992.1 | DUF1380 family protein | - |
| IQS17_RS25650 () | 37598..38368 | + | 771 | WP_015058993.1 | hypothetical protein | - |
| IQS17_RS25655 () | 38904..39206 | + | 303 | WP_072115680.1 | antirestriction protein | - |
| IQS17_RS25660 () | 39253..39675 | + | 423 | WP_000271739.1 | DUF1380 family protein | - |
| IQS17_RS25665 () | 39672..39863 | + | 192 | WP_001027511.1 | hypothetical protein | - |
| IQS17_RS25670 () | 40142..40390 | - | 249 | WP_071587243.1 | hypothetical protein | - |
| IQS17_RS25675 () | 40906..41136 | + | 231 | WP_000218644.1 | hypothetical protein | - |
| IQS17_RS25680 () | 41188..42549 | + | 1362 | WP_025746315.1 | DUF3560 domain-containing protein | - |
| IQS17_RS25685 () | 42596..43159 | + | 564 | WP_016240496.1 | class I SAM-dependent methyltransferase | - |
| IQS17_RS25690 () | 43245..43730 | - | 486 | WP_205590616.1 | hypothetical protein | - |
| IQS17_RS25695 () | 44032..44559 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| IQS17_RS25700 () | 44617..44850 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| IQS17_RS25705 () | 44911..46875 | + | 1965 | WP_117389470.1 | ParB/RepB/Spo0J family partition protein | - |
| IQS17_RS25710 () | 46944..47378 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| IQS17_RS25715 () | 47375..48094 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 48106..48330 | + | 225 | NuclAT_0 | - | - |
| - () | 48106..48330 | + | 225 | NuclAT_0 | - | - |
| - () | 48106..48330 | + | 225 | NuclAT_0 | - | - |
| - () | 48106..48330 | + | 225 | NuclAT_0 | - | - |
| IQS17_RS25720 () | 48115..48294 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - () | 48263..48328 | - | 66 | - | - | Antitoxin Detail |
| IQS17_RS25725 () | 48374..48532 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IQS17_RS25730 () | 48833..49037 | - | 205 | Protein_61 | pilus protein | - |
| IQS17_RS25735 () | 49429..49725 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| IQS17_RS25740 () | 49836..50657 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| IQS17_RS25745 () | 50954..51544 | - | 591 | WP_000252683.1 | hypothetical protein | VF |
| IQS17_RS25750 () | 51877..52260 | + | 384 | WP_001151529.1 | relaxosome protein TraM | - |
| IQS17_RS25755 () | 52452..53099 | + | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| IQS17_RS25760 () | 53207..53446 | + | 240 | WP_042018283.1 | conjugal transfer relaxosome protein TraY | - |
| IQS17_RS25765 () | 53480..53842 | + | 363 | WP_012881131.1 | type IV conjugative transfer system pilin TraA | - |
| IQS17_RS25770 () | 53857..54168 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| IQS17_RS25775 () | 54190..54756 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| IQS17_RS25780 () | 54743..55471 | + | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| IQS17_RS25785 () | 55471..56898 | + | 1428 | WP_012881130.1 | conjugal transfer protein TraB | - |
| IQS17_RS25790 () | 56888..57478 | + | 591 | WP_012881129.1 | conjugal transfer protein TraP | - |
| IQS17_RS25795 () | 57417..57785 | + | 369 | WP_001681801.1 | conjugal transfer protein TrbD | - |
| IQS17_RS25800 () | 57782..58297 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IQS17_RS25805 () | 58432..58653 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| IQS17_RS25810 () | 58646..59122 | + | 477 | WP_012881127.1 | hypothetical protein | - |
| IQS17_RS25815 () | 59221..59439 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| IQS17_RS25820 () | 59467..59814 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| IQS17_RS25825 () | 59940..62570 | + | 2631 | WP_000069772.1 | type IV secretion system protein TraC | - |
| IQS17_RS25830 () | 62567..62953 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| IQS17_RS25835 () | 62950..63582 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| IQS17_RS25840 () | 63579..64571 | + | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| IQS17_RS25845 () | 64601..64906 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| IQS17_RS25850 () | 64915..65553 | + | 639 | WP_015058995.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IQS17_RS25855 () | 65550..67400 | + | 1851 | WP_117389471.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IQS17_RS25860 () | 67427..67684 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| IQS17_RS25865 () | 67677..68420 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IQS17_RS25870 () | 68434..68775 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| IQS17_RS25875 () | 68756..69091 | - | 336 | WP_000736414.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|