MGE detailed information
MGE type: Genomic_island MGE length: 48966 bp
Accession: NZ_CP063515 Location: 4112951..4161916 Organism: Escherichia coli strain EH01-18-04-A Replicon: chromosome
Accession: NZ_CP063515 Location: 4112951..4161916 Organism: Escherichia coli strain EH01-18-04-A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS17_RS19915 () | 4108245..4108646 | + | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
| IQS17_RS19920 () | 4108685..4109740 | - | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| IQS17_RS19925 () | 4110029..4111132 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| IQS17_RS19930 () | 4111144..4112397 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| IQS17_RS19940 () | 4112602..4112805 | - | 204 | Protein_3891 | integrase | - |
| IQS17_RS19945 () | 4112951..4113421 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| IQS17_RS19950 () | 4113399..4113584 | - | 186 | WP_101918754.1 | ash family protein | - |
| IQS17_RS19955 () | 4113764..4115011 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| IQS17_RS19960 () | 4115001..4116638 | - | 1638 | WP_000229741.1 | type I restriction-modification system subunit M | - |
| IQS17_RS19965 () | 4116632..4119730 | - | 3099 | WP_000673070.1 | type I restriction endonuclease subunit R | - |
| IQS17_RS19970 () | 4120014..4120796 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| IQS17_RS19975 () | 4120783..4121703 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| IQS17_RS19980 () | 4121868..4123187 | - | 1320 | Protein_3899 | Prophage integrase IntA ; Integrase | Integrase |
| IQS17_RS19985 () | 4123414..4123572 | - | 159 | Protein_3900 | integrase | - |
| IQS17_RS19990 () | 4123621..4123806 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| IQS17_RS19995 () | 4124021..4124635 | + | 615 | WP_001019923.1 | YagU family protein | - |
| IQS17_RS20000 () | 4124709..4124872 | + | 164 | Protein_3903 | tail fiber assembly protein | - |
| IQS17_RS20005 () | 4124884..4125213 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| IQS17_RS20010 () | 4125520..4126230 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| IQS17_RS20015 () | 4126199..4127842 | - | 1644 | WP_001265649.1 | Fimbria adhesin EcpD | VF |
| IQS17_RS20020 () | 4127832..4130357 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| IQS17_RS20025 () | 4130383..4131051 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| IQS17_RS20030 () | 4131108..4131695 | - | 588 | WP_001545819.1 | Common pilus major fimbrillin subunit EcpA | VF |
| IQS17_RS20035 () | 4131770..4132312 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| IQS17_RS20040 () | 4133136..4133326 | + | 191 | Protein_3911 | hypothetical protein | - |
| IQS17_RS20045 () | 4133396..4133536 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| IQS17_RS20050 () | 4133536..4133799 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| IQS17_RS20055 () | 4134164..4134265 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| IQS17_RS20060 () | 4134738..4135880 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| IQS17_RS20065 () | 4136053..4136973 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| IQS17_RS20070 () | 4137130..4138056 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| IQS17_RS20075 () | 4138256..4139149 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| IQS17_RS20080 () | 4139180..4140169 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| IQS17_RS20085 () | 4140196..4141047 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| IQS17_RS20090 () | 4141613..4145860 | + | 4248 | WP_000092553.1 | Invasin | VF |
| IQS17_RS20095 () | 4145985..4146842 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| IQS17_RS20100 () | 4147090..4147959 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| IQS17_RS20105 () | 4148119..4148712 | - | 594 | WP_203075279.1 | YkgB family protein | - |
| IQS17_RS20110 () | 4148724..4148960 | - | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| IQS17_RS20115 () | 4149069..4150394 | - | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| IQS17_RS20120 () | 4150621..4151475 | + | 855 | WP_001295801.1 | DNA-binding transcriptional regulator RclR | - |
| IQS17_RS20125 () | 4152001..4152720 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| IQS17_RS20130 () | 4152731..4154158 | + | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| IQS17_RS20135 () | 4154151..4154846 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| IQS17_RS20140 () | 4155089..4155757 | - | 669 | WP_001545820.1 | hypothetical protein | - |
| IQS17_RS20145 () | 4155941..4157134 | - | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| IQS17_RS20150 () | 4157156..4158232 | - | 1077 | Protein_3933 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| IQS17_RS20155 () | 4158274..4159035 | - | 762 | WP_001524129.1 | protein HyxA | - |
| IQS17_RS20160 () | 4159189..4159983 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| IQS17_RS20165 () | 4160313..4160876 | - | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| IQS17_RS20170 () | 4161958..4163628 | - | 1671 | WP_001159126.1 | choline dehydrogenase | - |
| IQS17_RS20175 () | 4163642..4165114 | - | 1473 | WP_001545821.1 | betaine-aldehyde dehydrogenase | - |
| IQS17_RS20180 () | 4165128..4165715 | - | 588 | WP_001545822.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|