MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 89201 bp
Accession: NZ_CP063396 Location: 5318210..5407410 Organism: Pseudomonas aeruginosa strain ST167_d26burn Replicon: chromosome
Accession: NZ_CP063396 Location: 5318210..5407410 Organism: Pseudomonas aeruginosa strain ST167_d26burn Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IPV38_RS24565 (IPV38_24560) | 5313782..5317981 | + | 4200 | WP_003455748.1 | two-partner secretion system exoprotein TpsA4 | - |
| IPV38_RS24575 (IPV38_24570) | 5318347..5319213 | + | 867 | WP_003111785.1 | ParA family protein | - |
| IPV38_RS24580 (IPV38_24575) | 5319215..5319952 | + | 738 | WP_004347984.1 | hypothetical protein | - |
| IPV38_RS24585 (IPV38_24580) | 5319949..5320446 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| IPV38_RS24590 (IPV38_24585) | 5320443..5321273 | + | 831 | WP_004352853.1 | hypothetical protein | - |
| IPV38_RS24595 (IPV38_24590) | 5321270..5321956 | + | 687 | WP_003122071.1 | hypothetical protein | - |
| IPV38_RS24600 (IPV38_24595) | 5321956..5322657 | + | 702 | WP_004347982.1 | DUF2786 domain-containing protein | - |
| IPV38_RS24605 (IPV38_24600) | 5322654..5323361 | + | 708 | WP_004352852.1 | HNH endonuclease signature motif containing protein | - |
| IPV38_RS24610 (IPV38_24605) | 5323345..5323563 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| IPV38_RS24615 (IPV38_24610) | 5323560..5324903 | + | 1344 | WP_019486079.1 | replicative DNA helicase | - |
| IPV38_RS24620 (IPV38_24615) | 5325342..5325788 | - | 447 | WP_031631896.1 | hypothetical protein | - |
| IPV38_RS24625 (IPV38_24620) | 5325966..5326151 | + | 186 | WP_023083214.1 | hypothetical protein | - |
| IPV38_RS24630 (IPV38_24625) | 5326141..5326668 | + | 528 | WP_004352849.1 | hypothetical protein | - |
| IPV38_RS24635 (IPV38_24630) | 5326665..5326922 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| IPV38_RS24640 (IPV38_24635) | 5326915..5327157 | + | 243 | WP_023083215.1 | hypothetical protein | - |
| IPV38_RS24645 (IPV38_24640) | 5327150..5327383 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| IPV38_RS24650 (IPV38_24645) | 5327383..5328399 | + | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| IPV38_RS24655 (IPV38_24650) | 5328402..5328656 | + | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| IPV38_RS24660 (IPV38_24655) | 5328653..5330389 | + | 1737 | WP_004352845.1 | ParB family protein | - |
| IPV38_RS24665 (IPV38_24660) | 5330417..5331184 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| IPV38_RS24670 (IPV38_24665) | 5331181..5332452 | + | 1272 | WP_023083217.1 | STY4528 family pathogenicity island replication protein | - |
| IPV38_RS24675 | 5332449..5333246 | + | 798 | WP_235597565.1 | hypothetical protein | - |
| IPV38_RS24680 (IPV38_24675) | 5333403..5334131 | + | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| IPV38_RS24685 (IPV38_24680) | 5334137..5334685 | + | 549 | WP_004352841.1 | DUF3158 family protein | - |
| IPV38_RS24690 (IPV38_24685) | 5334732..5335571 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| IPV38_RS24695 (IPV38_24690) | 5335601..5336089 | + | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| IPV38_RS24700 (IPV38_24695) | 5336245..5336412 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| IPV38_RS24705 (IPV38_24700) | 5336478..5336696 | - | 219 | WP_023083218.1 | hypothetical protein | - |
| IPV38_RS24710 (IPV38_24705) | 5336710..5336907 | - | 198 | WP_023083219.1 | hypothetical protein | - |
| IPV38_RS24715 (IPV38_24710) | 5336923..5337333 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IPV38_RS24720 (IPV38_24715) | 5337333..5337563 | - | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| IPV38_RS24725 (IPV38_24720) | 5337819..5339738 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| IPV38_RS24730 (IPV38_24725) | 5340046..5340255 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| IPV38_RS24735 (IPV38_24730) | 5340476..5342365 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| IPV38_RS24740 (IPV38_24735) | 5342362..5344335 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| IPV38_RS24745 (IPV38_24740) | 5344457..5345239 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| IPV38_RS24750 (IPV38_24745) | 5345272..5346525 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| IPV38_RS24755 (IPV38_24750) | 5346699..5347823 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| IPV38_RS24760 (IPV38_24755) | 5347823..5349532 | + | 1710 | WP_004352834.1 | hypothetical protein | VF |
| IPV38_RS24765 (IPV38_24760) | 5349536..5350861 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| IPV38_RS24770 (IPV38_24765) | 5350851..5351384 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| IPV38_RS24775 (IPV38_24770) | 5351393..5352973 | + | 1581 | WP_003123334.1 | hypothetical protein | VF |
| IPV38_RS24780 (IPV38_24775) | 5352973..5354052 | + | 1080 | WP_003123335.1 | hypothetical protein | VF |
| IPV38_RS24785 (IPV38_24780) | 5354074..5354604 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| IPV38_RS24790 (IPV38_24785) | 5354601..5355542 | + | 942 | WP_004352826.1 | ATPase, T2SS/T4P/T4SS family | - |
| IPV38_RS24795 (IPV38_24790) | 5355547..5356875 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| IPV38_RS24800 (IPV38_24795) | 5356904..5357341 | + | 438 | WP_004352822.1 | hypothetical protein | VF |
| IPV38_RS24805 | 5358263..5358652 | + | 390 | WP_004352820.1 | hypothetical protein | - |
| IPV38_RS24810 (IPV38_24805) | 5358727..5358903 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| IPV38_RS30750 | 5358905..5359039 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| IPV38_RS24815 (IPV38_24810) | 5359364..5359843 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| IPV38_RS24820 (IPV38_24815) | 5359981..5360139 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| IPV38_RS24825 (IPV38_24820) | 5360213..5360410 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| IPV38_RS24830 (IPV38_24825) | 5360895..5361602 | + | 708 | WP_004352808.1 | hypothetical protein | - |
| IPV38_RS24835 (IPV38_24830) | 5361838..5362188 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| IPV38_RS24840 (IPV38_24835) | 5362245..5362856 | + | 612 | Protein_4921 | DUF3275 family protein | - |
| IPV38_RS24845 (IPV38_24840) | 5363139..5363501 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| IPV38_RS24850 (IPV38_24845) | 5363569..5363823 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| IPV38_RS24855 (IPV38_24850) | 5363916..5364521 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| IPV38_RS24860 (IPV38_24855) | 5364551..5365996 | + | 1446 | WP_003125297.1 | DUF6094 domain-containing protein | - |
| IPV38_RS24865 (IPV38_24860) | 5366101..5368350 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| IPV38_RS24870 (IPV38_24865) | 5368375..5368758 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| IPV38_RS24875 (IPV38_24870) | 5368964..5369257 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| IPV38_RS24880 (IPV38_24875) | 5369254..5370120 | + | 867 | WP_004352797.1 | IS3 family transposase ISPosp5 | Transposase |
| IPV38_RS24885 (IPV38_24880) | 5370380..5371072 | + | 693 | WP_004352794.1 | hypothetical protein | - |
| IPV38_RS24890 (IPV38_24885) | 5371083..5371838 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| IPV38_RS24895 (IPV38_24890) | 5371823..5372404 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| IPV38_RS24900 (IPV38_24895) | 5372401..5372901 | + | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| IPV38_RS24905 (IPV38_24900) | 5372910..5373179 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| IPV38_RS24910 (IPV38_24905) | 5373183..5375414 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| IPV38_RS24915 (IPV38_24910) | 5375414..5376160 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| IPV38_RS24920 (IPV38_24915) | 5376178..5376669 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| IPV38_RS24925 (IPV38_24920) | 5376910..5378391 | + | 1482 | WP_003109390.1 | UvrD-helicase domain-containing protein | - |
| IPV38_RS24930 (IPV38_24925) | 5378523..5379632 | + | 1110 | WP_003125327.1 | hypothetical protein | - |
| IPV38_RS24935 (IPV38_24930) | 5379677..5379943 | - | 267 | WP_223703940.1 | DUF2845 domain-containing protein | - |
| IPV38_RS24940 (IPV38_24935) | 5380161..5380460 | + | 300 | WP_003125328.1 | hypothetical protein | - |
| IPV38_RS24945 (IPV38_24940) | 5380554..5380892 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| IPV38_RS24950 (IPV38_24945) | 5380889..5381128 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| IPV38_RS24955 (IPV38_24950) | 5381146..5381502 | + | 357 | WP_003159691.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| IPV38_RS24960 (IPV38_24955) | 5381513..5381899 | + | 387 | WP_003125333.1 | TIGR03750 family conjugal transfer protein | - |
| IPV38_RS24965 (IPV38_24960) | 5381896..5382555 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| IPV38_RS24970 (IPV38_24965) | 5382552..5383436 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| IPV38_RS24975 (IPV38_24970) | 5383420..5384925 | + | 1506 | WP_243496775.1 | TIGR03752 family integrating conjugative element protein | - |
| IPV38_RS24980 (IPV38_24975) | 5384903..5385346 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| IPV38_RS24985 (IPV38_24980) | 5385346..5388288 | + | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| IPV38_RS24990 (IPV38_24985) | 5388285..5388569 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| IPV38_RS24995 (IPV38_24990) | 5388566..5389225 | + | 660 | WP_019484424.1 | DsbA family protein | - |
| IPV38_RS25000 (IPV38_24995) | 5389222..5389440 | - | 219 | WP_019484423.1 | hypothetical protein | - |
| IPV38_RS25005 (IPV38_25000) | 5391581..5392012 | + | 432 | WP_023083783.1 | TIGR03757 family integrating conjugative element protein | - |
| IPV38_RS25010 (IPV38_25005) | 5392012..5392950 | + | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| IPV38_RS25015 (IPV38_25010) | 5392968..5394350 | + | 1383 | WP_023083784.1 | integrating conjugative element protein | - |
| IPV38_RS25020 (IPV38_25015) | 5394350..5394697 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| IPV38_RS25025 (IPV38_25020) | 5394694..5396208 | + | 1515 | WP_023083785.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| IPV38_RS25030 (IPV38_25025) | 5396265..5396603 | - | 339 | WP_023083786.1 | hypothetical protein | - |
| IPV38_RS25035 (IPV38_25030) | 5396722..5396994 | + | 273 | WP_023083787.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| IPV38_RS25040 (IPV38_25035) | 5396998..5397348 | + | 351 | WP_023083788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IPV38_RS25045 (IPV38_25040) | 5397759..5400218 | - | 2460 | WP_023083789.1 | ATP-binding protein | - |
| IPV38_RS25050 (IPV38_25045) | 5400506..5402233 | - | 1728 | WP_023083790.1 | ATP-binding protein | - |
| IPV38_RS25055 (IPV38_25050) | 5402244..5403257 | - | 1014 | WP_023083791.1 | SIR2 family protein | - |
| IPV38_RS25060 (IPV38_25055) | 5403799..5405718 | + | 1920 | WP_023083792.1 | MobH family relaxase | - |
| IPV38_RS25065 (IPV38_25060) | 5405715..5406995 | + | 1281 | WP_023083793.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IPV38_RS25085 (IPV38_25080) | 5407848..5410412 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| IPV38_RS25090 (IPV38_25085) | 5410568..5411296 | - | 729 | WP_023086644.1 | peptidoglycan editing factor PgeF | - |
| IPV38_RS25095 (IPV38_25090) | 5411293..5412255 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|