MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 89201 bp
Accession: NZ_CP063393 Location: 5318196..5407396 Organism: Pseudomonas aeruginosa strain ST167_d67burn2 Replicon: chromosome
Accession: NZ_CP063393 Location: 5318196..5407396 Organism: Pseudomonas aeruginosa strain ST167_d67burn2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IPV41_RS24565 (IPV41_24570) | 5313768..5317967 | + | 4200 | WP_003455748.1 | two-partner secretion system exoprotein TpsA4 | - |
| IPV41_RS24575 (IPV41_24580) | 5318333..5319199 | + | 867 | WP_003111785.1 | ParA family protein | - |
| IPV41_RS24580 (IPV41_24585) | 5319201..5319938 | + | 738 | WP_004347984.1 | hypothetical protein | - |
| IPV41_RS24585 (IPV41_24590) | 5319935..5320432 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| IPV41_RS24590 (IPV41_24595) | 5320429..5321259 | + | 831 | WP_004352853.1 | hypothetical protein | - |
| IPV41_RS24595 (IPV41_24600) | 5321256..5321942 | + | 687 | WP_003122071.1 | hypothetical protein | - |
| IPV41_RS24600 (IPV41_24605) | 5321942..5322643 | + | 702 | WP_004347982.1 | DUF2786 domain-containing protein | - |
| IPV41_RS24605 (IPV41_24610) | 5322640..5323347 | + | 708 | WP_004352852.1 | HNH endonuclease signature motif containing protein | - |
| IPV41_RS24610 (IPV41_24615) | 5323331..5323549 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| IPV41_RS24615 (IPV41_24620) | 5323546..5324889 | + | 1344 | WP_019486079.1 | replicative DNA helicase | - |
| IPV41_RS24620 (IPV41_24625) | 5325328..5325774 | - | 447 | WP_031631896.1 | hypothetical protein | - |
| IPV41_RS24625 (IPV41_24630) | 5325952..5326137 | + | 186 | WP_023083214.1 | hypothetical protein | - |
| IPV41_RS24630 (IPV41_24635) | 5326127..5326654 | + | 528 | WP_004352849.1 | hypothetical protein | - |
| IPV41_RS24635 (IPV41_24640) | 5326651..5326908 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| IPV41_RS24640 (IPV41_24645) | 5326901..5327143 | + | 243 | WP_023083215.1 | hypothetical protein | - |
| IPV41_RS24645 (IPV41_24650) | 5327136..5327369 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| IPV41_RS24650 (IPV41_24655) | 5327369..5328385 | + | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| IPV41_RS24655 (IPV41_24660) | 5328388..5328642 | + | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| IPV41_RS24660 (IPV41_24665) | 5328639..5330375 | + | 1737 | WP_004352845.1 | ParB family protein | - |
| IPV41_RS24665 (IPV41_24670) | 5330403..5331170 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| IPV41_RS24670 (IPV41_24675) | 5331167..5332438 | + | 1272 | WP_023083217.1 | STY4528 family pathogenicity island replication protein | - |
| IPV41_RS24675 | 5332435..5333232 | + | 798 | WP_235597565.1 | hypothetical protein | - |
| IPV41_RS24680 (IPV41_24685) | 5333389..5334117 | + | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| IPV41_RS24685 (IPV41_24690) | 5334123..5334671 | + | 549 | WP_004352841.1 | DUF3158 family protein | - |
| IPV41_RS24690 (IPV41_24695) | 5334718..5335557 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| IPV41_RS24695 (IPV41_24700) | 5335587..5336075 | + | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| IPV41_RS24700 (IPV41_24705) | 5336231..5336398 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| IPV41_RS24705 (IPV41_24710) | 5336464..5336682 | - | 219 | WP_023083218.1 | hypothetical protein | - |
| IPV41_RS24710 (IPV41_24715) | 5336696..5336893 | - | 198 | WP_023083219.1 | hypothetical protein | - |
| IPV41_RS24715 (IPV41_24720) | 5336909..5337319 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IPV41_RS24720 (IPV41_24725) | 5337319..5337549 | - | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| IPV41_RS24725 (IPV41_24730) | 5337805..5339724 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| IPV41_RS24730 (IPV41_24735) | 5340032..5340241 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| IPV41_RS24735 (IPV41_24740) | 5340462..5342351 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| IPV41_RS24740 (IPV41_24745) | 5342348..5344321 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| IPV41_RS24745 (IPV41_24750) | 5344443..5345225 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| IPV41_RS24750 (IPV41_24755) | 5345258..5346511 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| IPV41_RS24755 (IPV41_24760) | 5346685..5347809 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| IPV41_RS24760 (IPV41_24765) | 5347809..5349518 | + | 1710 | WP_004352834.1 | hypothetical protein | VF |
| IPV41_RS24765 (IPV41_24770) | 5349522..5350847 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| IPV41_RS24770 (IPV41_24775) | 5350837..5351370 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| IPV41_RS24775 (IPV41_24780) | 5351379..5352959 | + | 1581 | WP_003123334.1 | hypothetical protein | VF |
| IPV41_RS24780 (IPV41_24785) | 5352959..5354038 | + | 1080 | WP_003123335.1 | hypothetical protein | VF |
| IPV41_RS24785 (IPV41_24790) | 5354060..5354590 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| IPV41_RS24790 (IPV41_24795) | 5354587..5355528 | + | 942 | WP_004352826.1 | ATPase, T2SS/T4P/T4SS family | - |
| IPV41_RS24795 (IPV41_24800) | 5355533..5356861 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| IPV41_RS24800 (IPV41_24805) | 5356890..5357327 | + | 438 | WP_004352822.1 | hypothetical protein | VF |
| IPV41_RS24805 | 5358249..5358638 | + | 390 | WP_004352820.1 | hypothetical protein | - |
| IPV41_RS24810 (IPV41_24815) | 5358713..5358889 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| IPV41_RS30750 | 5358891..5359025 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| IPV41_RS24815 (IPV41_24820) | 5359350..5359829 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| IPV41_RS24820 (IPV41_24825) | 5359967..5360125 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| IPV41_RS24825 (IPV41_24830) | 5360199..5360396 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| IPV41_RS24830 (IPV41_24835) | 5360881..5361588 | + | 708 | WP_004352808.1 | hypothetical protein | - |
| IPV41_RS24835 (IPV41_24840) | 5361824..5362174 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| IPV41_RS24840 (IPV41_24845) | 5362231..5362842 | + | 612 | Protein_4921 | DUF3275 family protein | - |
| IPV41_RS24845 (IPV41_24850) | 5363125..5363487 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| IPV41_RS24850 (IPV41_24855) | 5363555..5363809 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| IPV41_RS24855 (IPV41_24860) | 5363902..5364507 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| IPV41_RS24860 (IPV41_24865) | 5364537..5365982 | + | 1446 | WP_003125297.1 | DUF6094 domain-containing protein | - |
| IPV41_RS24865 (IPV41_24870) | 5366087..5368336 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| IPV41_RS24870 (IPV41_24875) | 5368361..5368744 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| IPV41_RS24875 (IPV41_24880) | 5368950..5369243 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| IPV41_RS24880 (IPV41_24885) | 5369240..5370106 | + | 867 | WP_004352797.1 | IS3 family transposase ISPosp5 | Transposase |
| IPV41_RS24885 (IPV41_24890) | 5370366..5371058 | + | 693 | WP_004352794.1 | hypothetical protein | - |
| IPV41_RS24890 (IPV41_24895) | 5371069..5371824 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| IPV41_RS24895 (IPV41_24900) | 5371809..5372390 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| IPV41_RS24900 (IPV41_24905) | 5372387..5372887 | + | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| IPV41_RS24905 (IPV41_24910) | 5372896..5373165 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| IPV41_RS24910 (IPV41_24915) | 5373169..5375400 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| IPV41_RS24915 (IPV41_24920) | 5375400..5376146 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| IPV41_RS24920 (IPV41_24925) | 5376164..5376655 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| IPV41_RS24925 (IPV41_24930) | 5376896..5378377 | + | 1482 | WP_003109390.1 | UvrD-helicase domain-containing protein | - |
| IPV41_RS24930 (IPV41_24935) | 5378509..5379618 | + | 1110 | WP_003125327.1 | hypothetical protein | - |
| IPV41_RS24935 (IPV41_24940) | 5379663..5379929 | - | 267 | WP_223703940.1 | DUF2845 domain-containing protein | - |
| IPV41_RS24940 (IPV41_24945) | 5380147..5380446 | + | 300 | WP_003125328.1 | hypothetical protein | - |
| IPV41_RS24945 (IPV41_24950) | 5380540..5380878 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| IPV41_RS24950 (IPV41_24955) | 5380875..5381114 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| IPV41_RS24955 (IPV41_24960) | 5381132..5381488 | + | 357 | WP_003159691.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| IPV41_RS24960 (IPV41_24965) | 5381499..5381885 | + | 387 | WP_003125333.1 | TIGR03750 family conjugal transfer protein | - |
| IPV41_RS24965 (IPV41_24970) | 5381882..5382541 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| IPV41_RS24970 (IPV41_24975) | 5382538..5383422 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| IPV41_RS24975 (IPV41_24980) | 5383406..5384911 | + | 1506 | WP_243496775.1 | TIGR03752 family integrating conjugative element protein | - |
| IPV41_RS24980 (IPV41_24985) | 5384889..5385332 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| IPV41_RS24985 (IPV41_24990) | 5385332..5388274 | + | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| IPV41_RS24990 (IPV41_24995) | 5388271..5388555 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| IPV41_RS24995 (IPV41_25000) | 5388552..5389211 | + | 660 | WP_019484424.1 | DsbA family protein | - |
| IPV41_RS25000 (IPV41_25005) | 5389208..5389426 | - | 219 | WP_019484423.1 | hypothetical protein | - |
| IPV41_RS25005 (IPV41_25010) | 5391567..5391998 | + | 432 | WP_023083783.1 | TIGR03757 family integrating conjugative element protein | - |
| IPV41_RS25010 (IPV41_25015) | 5391998..5392936 | + | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| IPV41_RS25015 (IPV41_25020) | 5392954..5394336 | + | 1383 | WP_023083784.1 | integrating conjugative element protein | - |
| IPV41_RS25020 (IPV41_25025) | 5394336..5394683 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| IPV41_RS25025 (IPV41_25030) | 5394680..5396194 | + | 1515 | WP_023083785.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| IPV41_RS25030 (IPV41_25035) | 5396251..5396589 | - | 339 | WP_023083786.1 | hypothetical protein | - |
| IPV41_RS25035 (IPV41_25040) | 5396708..5396980 | + | 273 | WP_023083787.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| IPV41_RS25040 (IPV41_25045) | 5396984..5397334 | + | 351 | WP_023083788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IPV41_RS25045 (IPV41_25050) | 5397745..5400204 | - | 2460 | WP_023083789.1 | ATP-binding protein | - |
| IPV41_RS25050 (IPV41_25055) | 5400492..5402219 | - | 1728 | WP_023083790.1 | ATP-binding protein | - |
| IPV41_RS25055 (IPV41_25060) | 5402230..5403243 | - | 1014 | WP_023083791.1 | SIR2 family protein | - |
| IPV41_RS25060 (IPV41_25065) | 5403785..5405704 | + | 1920 | WP_023083792.1 | MobH family relaxase | - |
| IPV41_RS25065 (IPV41_25070) | 5405701..5406981 | + | 1281 | WP_023083793.1 | hypothetical protein ; Integrase | Integrase |
| IPV41_RS25085 (IPV41_25090) | 5407834..5410398 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| IPV41_RS25090 (IPV41_25095) | 5410554..5411282 | - | 729 | WP_023086644.1 | peptidoglycan editing factor PgeF | - |
| IPV41_RS25095 (IPV41_25100) | 5411279..5412241 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|