MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 96331 bp
Accession: NZ_CP063334 Location: 1..96331 Organism: Escherichia coli strain BS74R-D Replicon: plasmid pBS74R-D_2
Accession: NZ_CP063334 Location: 1..96331 Organism: Escherichia coli strain BS74R-D Replicon: plasmid pBS74R-D_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IN878_RS24125 () | 47..1483 | + | 1437 | WP_203037291.1 | phage tail protein | - |
| IN878_RS24130 () | 1487..2014 | + | 528 | WP_001164120.1 | tail fiber assembly protein | - |
| IN878_RS24135 () | 2043..2576 | - | 534 | WP_047630150.1 | tail fiber assembly protein | - |
| IN878_RS24140 () | 2579..5218 | - | 2640 | WP_089659779.1 | tail fiber protein | - |
| IN878_RS24145 () | 5230..5664 | - | 435 | WP_001286328.1 | hypothetical protein | - |
| IN878_RS24150 () | 5743..6579 | - | 837 | WP_001189838.1 | hypothetical protein | - |
| IN878_RS24155 () | 6579..8012 | - | 1434 | WP_000047923.1 | bleomycin hydrolase | - |
| IN878_RS24160 () | 8009..8365 | - | 357 | WP_000002800.1 | hypothetical protein | - |
| IN878_RS24165 () | 8365..11787 | - | 3423 | WP_203037254.1 | transglycosylase SLT domain-containing protein | - |
| IN878_RS24170 () | 11869..12750 | - | 882 | WP_047629998.1 | hypothetical protein | - |
| IN878_RS24175 () | 12765..13376 | - | 612 | WP_000523980.1 | hypothetical protein | - |
| IN878_RS24180 () | 13387..13953 | - | 567 | WP_000188920.1 | hypothetical protein | - |
| IN878_RS24185 () | 14034..14573 | - | 540 | WP_047630001.1 | DUF5384 family protein | - |
| IN878_RS24190 () | 14577..15089 | - | 513 | WP_000039791.1 | hypothetical protein | - |
| IN878_RS24195 () | 15711..15932 | + | 222 | Protein_14 | host cell division inhibitor Icd-like protein | - |
| IN878_RS24200 () | 15929..16972 | + | 1044 | WP_000743164.1 | phage antirepressor Ant | - |
| IN878_RS24205 () | 17136..17936 | + | 801 | WP_001187875.1 | phage antirepressor KilAC domain-containing protein | - |
| IN878_RS24210 () | 17966..18811 | + | 846 | WP_203037255.1 | Replication protein repL | - |
| IN878_RS24215 () | 18862..19107 | + | 246 | WP_001369095.1 | hypothetical protein | - |
| IN878_RS24220 () | 19289..19444 | + | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| IN878_RS24225 () | 19561..20070 | - | 510 | WP_053273039.1 | hypothetical protein | - |
| IN878_RS24230 () | 20082..20663 | - | 582 | WP_000035303.1 | hypothetical protein | - |
| IN878_RS24235 () | 20699..21514 | - | 816 | WP_000041761.1 | hypothetical protein | - |
| IN878_RS24240 () | 21524..23113 | - | 1590 | WP_079918237.1 | hypothetical protein | - |
| IN878_RS24245 () | 23174..24880 | - | 1707 | WP_000067710.1 | hypothetical protein | - |
| IN878_RS24250 () | 25147..26112 | - | 966 | WP_000725191.1 | ParB/RepB/Spo0J family partition protein | - |
| IN878_RS24255 () | 26109..27314 | - | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| IN878_RS24260 () | 27714..28574 | - | 861 | WP_001076427.1 | replication protein RepA | - |
| IN878_RS24265 () | 28893..29285 | - | 393 | WP_001281114.1 | hypothetical protein | - |
| IN878_RS24270 () | 29463..29885 | - | 423 | WP_000007767.1 | hypothetical protein | - |
| IN878_RS24275 () | 29925..30713 | - | 789 | WP_001774492.1 | hypothetical protein | - |
| IN878_RS24280 () | 31176..31460 | + | 285 | WP_001177860.1 | hypothetical protein | - |
| IN878_RS24285 () | 31453..32358 | + | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| IN878_RS24290 () | 32355..34619 | + | 2265 | WP_000660987.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| IN878_RS24305 () | 36374..36799 | + | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| IN878_RS24310 () | 36799..36963 | + | 165 | WP_000234831.1 | DUF3927 family protein | - |
| IN878_RS24320 () | 37436..38800 | + | 1365 | WP_001276603.1 | replicative DNA helicase | - |
| IN878_RS24325 () | 38800..39798 | + | 999 | WP_032167108.1 | hypothetical protein | - |
| IN878_RS24330 () | 39845..40477 | - | 633 | WP_000535208.1 | hypothetical protein | - |
| IN878_RS24335 () | 40470..41486 | - | 1017 | WP_000212018.1 | hypothetical protein | - |
| IN878_RS24340 () | 41488..42273 | - | 786 | WP_000602713.1 | hypothetical protein | - |
| IN878_RS24345 () | 42260..42988 | - | 729 | WP_000896806.1 | hypothetical protein | - |
| IN878_RS24350 () | 42992..44209 | - | 1218 | WP_001141915.1 | hypothetical protein | - |
| IN878_RS24355 () | 44219..44596 | - | 378 | WP_000235786.1 | hypothetical protein | - |
| IN878_RS24360 () | 44743..44988 | + | 246 | WP_000840931.1 | hypothetical protein | - |
| IN878_RS24365 () | 44991..45569 | + | 579 | WP_000943609.1 | VRR-NUC domain-containing protein | - |
| IN878_RS24370 () | 45636..45791 | + | 156 | WP_000096174.1 | hypothetical protein | - |
| IN878_RS24375 () | 45733..46395 | + | 663 | WP_012817939.1 | hypothetical protein | - |
| IN878_RS24380 () | 46293..46919 | + | 627 | WP_000484110.1 | norphogenetic protein | - |
| IN878_RS24385 () | 46916..47593 | + | 678 | WP_001354545.1 | metallophosphoesterase | - |
| IN878_RS24390 () | 47590..48291 | + | 702 | WP_000684845.1 | hypothetical protein | - |
| IN878_RS24395 () | 48593..49855 | + | 1263 | WP_064669532.1 | hypothetical protein | - |
| IN878_RS24400 () | 49928..50434 | + | 507 | WP_064669533.1 | hypothetical protein | - |
| IN878_RS24405 () | 50699..53815 | - | 3117 | WP_072643885.1 | HsdR family type I site-specific deoxyribonuclease | - |
| IN878_RS24410 () | 53937..55142 | - | 1206 | WP_001293319.1 | restriction endonuclease subunit S | - |
| IN878_RS24415 () | 55139..56695 | - | 1557 | WP_016236874.1 | type I restriction-modification system subunit M | - |
| IN878_RS24420 () | 56878..57099 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IN878_RS24425 () | 57099..57479 | + | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| IN878_RS24430 () | 57484..57663 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| IN878_RS24435 () | 57691..58734 | + | 1044 | WP_094319660.1 | DUF968 domain-containing protein | - |
| IN878_RS24440 () | 58823..59275 | + | 453 | WP_016236875.1 | hypothetical protein | - |
| IN878_RS24445 () | 59362..60555 | + | 1194 | WP_000219607.1 | hypothetical protein | - |
| IN878_RS24450 () | 60555..62039 | + | 1485 | WP_000124150.1 | terminase | - |
| IN878_RS24455 () | 62065..62916 | - | 852 | WP_000611657.1 | hypothetical protein | - |
| IN878_RS24460 () | 63027..63236 | - | 210 | WP_000874154.1 | hypothetical protein | - |
| IN878_RS24465 () | 63841..64063 | + | 223 | Protein_65 | creatininase | - |
| IN878_RS24470 () | 64071..65102 | + | 1032 | WP_052908434.1 | site-specific integrase | - |
| IN878_RS24475 () | 65153..65464 | + | 312 | WP_001224236.1 | hypothetical protein | - |
| IN878_RS24480 () | 65711..66271 | + | 561 | WP_094320458.1 | Ref family protein | - |
| IN878_RS24485 () | 66461..67102 | + | 642 | WP_094320457.1 | maturation control protein | - |
| IN878_RS24490 () | 67142..67390 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| IN878_RS24495 () | 67387..67827 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| IN878_RS24500 () | 67861..74628 | - | 6768 | WP_188003491.1 | N-6 DNA methylase | - |
| IN878_RS24505 () | 74704..76425 | + | 1722 | WP_112026189.1 | phage portal protein | - |
| IN878_RS24510 () | 76458..77588 | - | 1131 | WP_024199460.1 | IS200-IS605 family transposase ISEc42 | Transposase |
| IN878_RS24515 () | 77701..78720 | + | 1020 | WP_000132937.1 | head processing protein | - |
| IN878_RS24520 () | 79012..79569 | - | 558 | WP_001345478.1 | lysozyme | - |
| IN878_RS24525 () | 79739..80227 | + | 489 | WP_000068865.1 | single-stranded DNA-binding protein | - |
| IN878_RS24530 () | 80425..81102 | + | 678 | WP_072649189.1 | DUF2829 domain-containing protein | - |
| IN878_RS24535 () | 81109..81897 | + | 789 | WP_001697797.1 | hypothetical protein | - |
| IN878_RS24540 () | 82339..83547 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| IN878_RS24545 () | 83562..84839 | + | 1278 | Protein_81 | PQQ-binding-like beta-propeller repeat protein | - |
| IN878_RS24550 () | 85041..86591 | - | 1551 | WP_001189617.1 | multicopper oxidase CueO | - |
| IN878_RS24555 () | 86748..87956 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| IN878_RS24560 () | 88355..88663 | - | 309 | WP_001697775.1 | hypothetical protein | - |
| IN878_RS24565 () | 88653..91640 | - | 2988 | WP_029401679.1 | hypothetical protein | - |
| IN878_RS24570 () | 91653..92018 | - | 366 | WP_029401678.1 | hypothetical protein | - |
| IN878_RS24575 () | 92015..93934 | - | 1920 | WP_032163796.1 | hypothetical protein | - |
| IN878_RS24580 () | 93936..94538 | - | 603 | WP_001345482.1 | hypothetical protein | - |
| IN878_RS24585 () | 94525..94968 | - | 444 | WP_072643810.1 | lysis protein | - |
| IN878_RS24590 () | 94965..95294 | - | 330 | WP_000887652.1 | holin | - |
| IN878_RS24595 () | 95362..95643 | - | 282 | WP_000332810.1 | hypothetical protein | - |
| IN878_RS24600 () | 95771..96331 | + | 561 | WP_000905118.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|