MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 138182 bp
Accession: NZ_CP062951 Location: 1429492..1567673 Organism: Bifidobacterium longum subsp. infantis strain JCM 11347 Replicon: chromosome
Accession: NZ_CP062951 Location: 1429492..1567673 Organism: Bifidobacterium longum subsp. infantis strain JCM 11347 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BL1347_RS06315 () | 1425683..1426777 | + | 1095 | WP_014484723.1 | ABC transporter permease | - |
| BL1347_RS06320 () | 1426779..1427960 | + | 1182 | WP_193641250.1 | ABC transporter permease | - |
| BL1347_RS06325 () | 1427966..1429678 | + | 1713 | WP_193641251.1 | ABC transporter ATP-binding protein | - |
| BL1347_RS06330 () | 1429872..1430993 | + | 1122 | WP_032745268.1 | LacI family transcriptional regulator | - |
| BL1347_RS06335 () | 1431077..1432312 | - | 1236 | WP_193641252.1 | AGE family epimerase/isomerase | - |
| BL1347_RS06340 () | 1432379..1433676 | - | 1298 | Protein_1228 | glycoside hydrolase family 125 protein | - |
| BL1347_RS06345 () | 1433890..1434786 | - | 897 | WP_193641253.1 | carbohydrate kinase | - |
| BL1347_RS06350 () | 1434859..1436073 | - | 1215 | WP_193641254.1 | ROK family transcriptional regulator | - |
| BL1347_RS06355 () | 1436300..1437214 | + | 915 | WP_193641255.1 | ROK family protein | - |
| BL1347_RS06360 () | 1437355..1438479 | - | 1125 | WP_032745260.1 | ROK family protein | - |
| BL1347_RS06365 () | 1438817..1439629 | + | 813 | WP_193641256.1 | glucosamine-6-phosphate deaminase | - |
| BL1347_RS06370 () | 1439809..1441086 | + | 1278 | WP_193641257.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| BL1347_RS06375 () | 1441518..1442855 | + | 1338 | WP_080714915.1 | carbohydrate ABC transporter substrate-binding protein | - |
| BL1347_RS06380 () | 1443038..1443913 | + | 876 | WP_014484728.1 | sugar ABC transporter permease | - |
| BL1347_RS06385 () | 1444026..1444862 | + | 837 | WP_014484729.1 | carbohydrate ABC transporter permease | - |
| BL1347_RS06390 () | 1444859..1445038 | + | 180 | WP_012577257.1 | hypothetical protein | - |
| BL1347_RS06395 () | 1445467..1446225 | + | 759 | WP_143081243.1 | peptidyl-prolyl cis-trans isomerase | - |
| BL1347_RS06400 () | 1446301..1449285 | + | 2985 | WP_193641258.1 | discoidin domain-containing protein | - |
| BL1347_RS06405 () | 1449489..1450010 | - | 522 | WP_065436232.1 | NUDIX domain-containing protein | - |
| BL1347_RS06410 () | 1450007..1451596 | - | 1590 | WP_193641259.1 | aminopeptidase P family protein | - |
| BL1347_RS06415 () | 1451900..1452751 | - | 852 | WP_193642247.1 | hypothetical protein | - |
| BL1347_RS06420 () | 1454005..1455594 | + | 1590 | WP_193641260.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| BL1347_RS06425 () | 1455655..1459332 | + | 3678 | WP_193641261.1 | chromosome segregation protein SMC | - |
| BL1347_RS06430 () | 1459451..1460446 | - | 996 | WP_065473520.1 | GNAT family N-acetyltransferase | - |
| BL1347_RS06435 () | 1460568..1462121 | - | 1554 | WP_193641262.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase | - |
| BL1347_RS06440 () | 1462296..1463048 | + | 753 | WP_193642248.1 | sigma-70 family RNA polymerase sigma factor | - |
| BL1347_RS06445 () | 1463048..1463368 | + | 321 | WP_007055264.1 | hypothetical protein | - |
| BL1347_RS06450 () | 1463634..1464578 | - | 945 | WP_143723472.1 | aldose 1-epimerase family protein | - |
| BL1347_RS06455 () | 1464703..1465659 | - | 957 | WP_012577267.1 | aldose 1-epimerase family protein | - |
| BL1347_RS06460 () | 1465884..1466942 | + | 1059 | WP_193641263.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| BL1347_RS06465 () | 1466982..1467491 | - | 510 | WP_013410753.1 | Cys-tRNA(Pro) deacylase | - |
| BL1347_RS06470 () | 1467585..1468643 | - | 1059 | WP_003830594.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| BL1347_RS06475 () | 1468883..1469608 | - | 726 | WP_193641264.1 | thiamine diphosphokinase | - |
| BL1347_RS06480 () | 1469919..1470641 | + | 723 | WP_032682519.1 | translation initiation factor IF-3 | - |
| BL1347_RS06485 () | 1470622..1470816 | + | 195 | WP_007052593.1 | 50S ribosomal protein L35 | - |
| BL1347_RS06490 () | 1470870..1471253 | + | 384 | WP_011068013.1 | 50S ribosomal protein L20 | - |
| BL1347_RS06495 () | 1471368..1472294 | + | 927 | WP_174773102.1 | Tyrosine recombinase XerD | VF |
| BL1347_RS06500 () | 1472542..1473381 | + | 840 | WP_010080876.1 | hypothetical protein | VF |
| BL1347_RS06505 () | 1473400..1474314 | + | 915 | WP_193641265.1 | segregation/condensation protein A | - |
| BL1347_RS06510 () | 1474327..1475043 | + | 717 | WP_065473533.1 | SMC-Scp complex subunit ScpB | - |
| BL1347_RS06515 () | 1475175..1476002 | + | 828 | WP_012577276.1 | NUDIX hydrolase | - |
| BL1347_RS06520 () | 1476062..1477342 | + | 1281 | WP_193641266.1 | quinolinate synthase NadA | - |
| BL1347_RS06525 () | 1477432..1479063 | + | 1632 | WP_193641267.1 | L-aspartate oxidase | - |
| BL1347_RS06530 () | 1479067..1479960 | + | 894 | WP_193641268.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| BL1347_RS06535 () | 1479963..1481210 | + | 1248 | WP_193641269.1 | cysteine desulfurase | - |
| BL1347_RS06540 () | 1481396..1483327 | + | 1932 | WP_012577281.1 | GTP-binding protein TypA/BipA | VF |
| BL1347_RS06545 () | 1483511..1484918 | - | 1408 | Protein_1269 | MFS transporter | - |
| BL1347_RS06550 () | 1485200..1485553 | + | 354 | Protein_1270 | IS3 family transposase ISBlo11 | Transposase |
| BL1347_RS06555 () | 1485592..1486038 | + | 447 | WP_065473541.1 | alcohol dehydrogenase | - |
| BL1347_RS06560 () | 1486118..1487095 | + | 978 | WP_193641270.1 | chorismate mutase | - |
| BL1347_RS06565 () | 1487089..1488153 | + | 1065 | WP_193641271.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
| BL1347_RS06570 () | 1488363..1488620 | + | 258 | WP_007052610.1 | hypothetical protein | - |
| BL1347_RS06575 () | 1488655..1489728 | + | 1074 | WP_193641272.1 | Tyrosine recombinase XerC | VF |
| BL1347_RS06580 () | 1489982..1491622 | + | 1641 | WP_193641273.1 | ABC transporter substrate-binding protein | - |
| BL1347_RS06585 () | 1491923..1492849 | + | 927 | WP_154535869.1 | ABC transporter permease | - |
| BL1347_RS06590 () | 1492870..1493874 | + | 1005 | WP_060620896.1 | ABC transporter permease | - |
| BL1347_RS06595 () | 1493897..1495906 | + | 2010 | WP_193641274.1 | Glutathione import ATP-binding protein GsiA | VF |
| BL1347_RS06600 () | 1496215..1497075 | - | 861 | WP_193641275.1 | exodeoxyribonuclease III | - |
| BL1347_RS06605 () | 1497200..1498054 | + | 855 | WP_193641276.1 | DUF3710 domain-containing protein | - |
| BL1347_RS06610 () | 1498070..1498849 | + | 780 | WP_193641277.1 | DUF3159 domain-containing protein | - |
| BL1347_RS06615 () | 1498839..1500107 | + | 1269 | WP_193642249.1 | class I SAM-dependent RNA methyltransferase | - |
| BL1347_RS06620 () | 1500119..1500814 | + | 696 | WP_065435924.1 | hypothetical protein | - |
| BL1347_RS06625 () | 1500905..1503406 | + | 2502 | WP_193641278.1 | HAD-IC family P-type ATPase | - |
| BL1347_RS06630 () | 1503527..1506226 | + | 2700 | WP_193641279.1 | aconitate hydratase AcnA | - |
| BL1347_RS06635 () | 1506372..1506734 | + | 363 | WP_011068030.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BL1347_RS06640 () | 1506734..1507225 | + | 492 | WP_193641280.1 | PIN domain-containing protein | Toxin Detail |
| BL1347_RS06645 () | 1507285..1509390 | - | 2106 | WP_193641281.1 | DUF262 domain-containing protein | - |
| BL1347_RS06650 () | 1509479..1510120 | - | 642 | WP_065435929.1 | GNAT family N-acetyltransferase | - |
| BL1347_RS06655 () | 1510161..1510301 | - | 141 | Protein_1291 | response regulator transcription factor | - |
| BL1347_RS06660 () | 1510470..1511372 | + | 903 | WP_032745207.1 | Bax inhibitor-1/YccA family protein | - |
| BL1347_RS06665 () | 1511512..1512528 | + | 1017 | WP_193642250.1 | DMT family transporter | - |
| BL1347_RS06670 () | 1512561..1513301 | - | 741 | WP_080771594.1 | GTP pyrophosphokinase YwaC | VF |
| BL1347_RS06675 () | 1513448..1514632 | - | 1185 | WP_193641282.1 | IS256 family transposase ISBlo5 | Transposase |
| BL1347_RS06680 () | 1514800..1516155 | + | 1356 | WP_193641283.1 | IS3 family transposase ISBmu11 | Transposase |
| BL1347_RS06685 () | 1516309..1516479 | + | 171 | WP_158082793.1 | hypothetical protein | - |
| BL1347_RS06690 () | 1516552..1517391 | + | 840 | WP_060620910.1 | phosphotransferase | - |
| BL1347_RS06695 () | 1517388..1518146 | + | 759 | WP_129558979.1 | hypothetical protein | - |
| BL1347_RS06700 () | 1518951..1519529 | + | 579 | WP_065435934.1 | flavoprotein | - |
| BL1347_RS06705 () | 1519542..1520129 | + | 588 | WP_129558980.1 | hypothetical protein | - |
| BL1347_RS06710 () | 1520133..1521134 | + | 1002 | WP_060620912.1 | methyltransferase domain-containing protein | - |
| BL1347_RS06715 () | 1521148..1522773 | + | 1626 | WP_060620913.1 | ATP-binding cassette domain-containing protein | - |
| BL1347_RS06720 () | 1523227..1524261 | + | 1035 | WP_193642251.1 | IS30 family transposase ISBlo4 | Transposase |
| BL1347_RS06725 () | 1524536..1525735 | + | 1200 | WP_193642252.1 | IS110 family transposase ISRhosp7 | Transposase |
| BL1347_RS06730 () | 1525909..1527363 | + | 1455 | WP_012577306.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| BL1347_RS06735 () | 1527374..1528360 | + | 987 | WP_012577307.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| BL1347_RS06740 () | 1528394..1529143 | - | 750 | WP_081292253.1 | putative adenosine monophosphate-protein transferase fic | VF |
| BL1347_RS06745 () | 1529366..1532275 | + | 2910 | WP_193641284.1 | DNA translocase FtsK | - |
| BL1347_RS06750 () | 1532455..1533090 | + | 636 | WP_060620917.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| BL1347_RS06755 () | 1533102..1533635 | + | 534 | WP_060620918.1 | CinA family protein | - |
| BL1347_RS06760 () | 1533695..1534210 | + | 516 | WP_077323764.1 | helix-turn-helix transcriptional regulator | - |
| BL1347_RS06765 () | 1534322..1534555 | + | 234 | WP_032745197.1 | DUF3046 domain-containing protein | - |
| BL1347_RS06770 () | 1534856..1536049 | + | 1194 | WP_193641285.1 | recombinase RecA | - |
| BL1347_RS06775 () | 1536052..1536645 | + | 594 | WP_071477740.1 | RecX family transcriptional regulator | - |
| BL1347_RS06785 () | 1537502..1538164 | + | 663 | WP_193641286.1 | ribosome-associated translation inhibitor RaiA | - |
| BL1347_RS06790 () | 1538326..1541220 | + | 2895 | WP_193641287.1 | preprotein translocase subunit SecA | - |
| BL1347_RS06795 () | 1541347..1541979 | - | 633 | WP_193641288.1 | GDSL family lipase | - |
| BL1347_RS06800 () | 1542203..1543249 | + | 1047 | WP_193641289.1 | anthranilate phosphoribosyltransferase | - |
| BL1347_RS06805 () | 1543246..1543902 | - | 657 | WP_193641290.1 | hypothetical protein | - |
| BL1347_RS06810 () | 1543963..1544664 | + | 702 | WP_012577321.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| BL1347_RS06815 () | 1544708..1546981 | - | 2274 | WP_193641291.1 | Serine/threonine-protein kinase PK-1 | VF |
| BL1347_RS06820 () | 1547125..1548207 | - | 1083 | WP_007058720.1 | polyprenyl synthetase family protein | - |
| BL1347_RS06825 () | 1548412..1549074 | + | 663 | WP_007052659.1 | DUF4192 family protein | - |
| BL1347_RS06830 () | 1549277..1550677 | + | 1401 | WP_065436211.1 | RNA polymerase principal sigma factor HrdB | VF |
| BL1347_RS06835 () | 1550735..1553053 | + | 2319 | WP_077425483.1 | type IIA DNA topoisomerase subunit B | - |
| BL1347_RS06840 () | 1553220..1554446 | + | 1227 | WP_193641292.1 | MFS transporter | - |
| BL1347_RS06845 () | 1554493..1555089 | + | 597 | WP_193641293.1 | hypothetical protein | - |
| BL1347_RS06850 () | 1555105..1559838 | + | 4734 | WP_193641294.1 | DEAD/DEAH box helicase | - |
| BL1347_RS06855 () | 1559849..1560637 | - | 789 | WP_193641295.1 | hypothetical protein | VF |
| BL1347_RS06860 () | 1560781..1563510 | - | 2730 | WP_060620931.1 | DNA topoisomerase IV subunit A | - |
| BL1347_RS06865 () | 1563761..1565029 | + | 1269 | WP_193641296.1 | alkaline phosphatase family protein | - |
| BL1347_RS06870 () | 1565039..1566130 | - | 1092 | WP_193641297.1 | DUF3071 domain-containing protein | - |
| BL1347_RS06875 () | 1566289..1566582 | + | 294 | WP_032745175.1 | DUF4193 domain-containing protein | - |
| BL1347_RS06880 () | 1566582..1567058 | + | 477 | WP_060620934.1 | dUTP diphosphatase | - |
| BL1347_RS06885 () | 1567192..1569516 | + | 2325 | WP_060621615.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| BL1347_RS06890 () | 1569618..1570157 | - | 540 | WP_013140857.1 | peptidylprolyl isomerase | - |
| BL1347_RS06895 () | 1570443..1570766 | + | 324 | WP_193641298.1 | hypothetical protein | - |
| BL1347_RS06900 () | 1570768..1570956 | + | 189 | WP_193642253.1 | helix-turn-helix transcriptional regulator | - |
| BL1347_RS06905 () | 1571151..1571342 | + | 192 | WP_013140855.1 | antitoxin VbhA family protein | - |
| BL1347_RS06910 () | 1571345..1571602 | + | 258 | Protein_1341 | cell filamentation protein Fic | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|