MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 78833 bp
Accession: NZ_CP062937 Location: 1153657..1232489 Organism: Bifidobacterium longum subsp. infantis strain KCTC 5934 Replicon: chromosome
Accession: NZ_CP062937 Location: 1153657..1232489 Organism: Bifidobacterium longum subsp. infantis strain KCTC 5934 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BL5934_RS05200 () | 1148877..1150508 | + | 1632 | WP_014485612.1 | substrate-binding domain-containing protein | - |
| BL5934_RS05205 () | 1150586..1151275 | - | 690 | WP_007056096.1 | M23 family metallopeptidase | - |
| BL5934_RS05225 () | 1152282..1153325 | - | 1044 | WP_007052691.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| BL5934_RS05230 () | 1153322..1153876 | - | 555 | WP_008783284.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| BL5934_RS05235 () | 1153893..1154774 | - | 882 | WP_007052689.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| BL5934_RS05240 () | 1154836..1155402 | - | 567 | WP_007052688.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| BL5934_RS05245 () | 1155423..1156394 | - | 972 | WP_007054366.1 | DNA polymerase III subunit delta | - |
| BL5934_RS05250 () | 1156461..1157807 | - | 1347 | WP_014485584.1 | amidohydrolase family protein | - |
| BL5934_RS05255 () | 1157947..1159701 | - | 1755 | WP_041473708.1 | ComEC/Rec2 family competence protein | - |
| BL5934_RS05260 () | 1159698..1160195 | - | 498 | WP_165502453.1 | helix-hairpin-helix domain-containing protein | - |
| BL5934_RS05265 () | 1160638..1163601 | - | 2964 | WP_007052683.1 | leucine--tRNA ligase | - |
| BL5934_RS05270 () | 1163644..1164489 | - | 846 | WP_193020264.1 | glutamate ABC transporter substrate-binding protein | - |
| BL5934_RS05275 () | 1164585..1165535 | - | 951 | WP_007052681.1 | magnesium transporter CorA family protein | - |
| BL5934_RS05280 () | 1165650..1166495 | - | 846 | WP_011068056.1 | histidine phosphatase family protein | - |
| BL5934_RS05285 () | 1166564..1167859 | + | 1296 | WP_022527663.1 | class I SAM-dependent methyltransferase | - |
| BL5934_RS05290 () | 1167887..1168291 | - | 405 | WP_007052678.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| BL5934_RS05295 () | 1168570..1169505 | + | 936 | WP_007052677.1 | DMT family transporter | - |
| BL5934_RS05300 () | 1169559..1169669 | + | 111 | Protein_1022 | nitroreductase | - |
| BL5934_RS05305 () | 1169889..1170857 | + | 969 | WP_007052675.1 | hypothetical protein | - |
| BL5934_RS05310 () | 1170930..1171469 | + | 540 | WP_032682381.1 | peptidylprolyl isomerase | - |
| BL5934_RS05315 () | 1171566..1172081 | + | 516 | WP_007054376.1 | helix-turn-helix domain-containing protein | - |
| BL5934_RS05320 () | 1172081..1172935 | + | 855 | WP_193020276.1 | IS3 family transposase | - |
| BL5934_RS05325 () | 1173053..1175377 | - | 2325 | WP_012471819.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| BL5934_RS05330 () | 1175511..1175987 | - | 477 | WP_007055963.1 | dUTP diphosphatase | - |
| BL5934_RS05335 () | 1175987..1176280 | - | 294 | WP_007052669.1 | DUF4193 domain-containing protein | - |
| BL5934_RS05340 () | 1176439..1177530 | + | 1092 | WP_007056777.1 | DUF3071 domain-containing protein | - |
| BL5934_RS05345 () | 1177540..1178808 | - | 1269 | WP_007054496.1 | alkaline phosphatase family protein | - |
| BL5934_RS05350 () | 1179059..1181788 | + | 2730 | WP_007052666.1 | DNA topoisomerase IV subunit A | - |
| BL5934_RS05355 () | 1181933..1182721 | + | 789 | WP_007054494.1 | response regulator transcription factor | - |
| BL5934_RS05360 () | 1182732..1187465 | - | 4734 | WP_007052664.1 | DEAD/DEAH box helicase | - |
| BL5934_RS05365 () | 1187481..1188473 | - | 993 | WP_007056771.1 | ribokinase | - |
| BL5934_RS05370 () | 1188517..1189743 | - | 1227 | WP_007056778.1 | MFS transporter | - |
| BL5934_RS05375 () | 1190103..1192421 | - | 2319 | WP_011068045.1 | type IIA DNA topoisomerase subunit B | - |
| BL5934_RS05380 () | 1192479..1193903 | - | 1425 | WP_007055162.1 | RNA polymerase sigma factor | - |
| BL5934_RS05385 () | 1194106..1194771 | - | 666 | WP_193020037.1 | DUF4192 family protein | - |
| BL5934_RS05390 () | 1194973..1196055 | + | 1083 | WP_007055156.1 | polyprenyl synthetase family protein | - |
| BL5934_RS05395 () | 1196199..1198472 | + | 2274 | WP_032736542.1 | PASTA domain-containing protein | - |
| BL5934_RS05400 () | 1198516..1199217 | - | 702 | WP_007052656.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| BL5934_RS05405 () | 1199278..1199973 | + | 696 | WP_032741572.1 | hypothetical protein | - |
| BL5934_RS05410 () | 1200214..1201260 | - | 1047 | WP_007055165.1 | anthranilate phosphoribosyltransferase | - |
| BL5934_RS05415 () | 1201461..1202598 | + | 1138 | Protein_1045 | transposase | - |
| BL5934_RS05420 () | 1203008..1205902 | - | 2895 | WP_007052649.1 | preprotein translocase subunit SecA | - |
| BL5934_RS05425 () | 1206064..1206726 | - | 663 | WP_007052648.1 | ribosome-associated translation inhibitor RaiA | - |
| BL5934_RS05435 () | 1207603..1208196 | - | 594 | WP_118294149.1 | RecX family transcriptional regulator | - |
| BL5934_RS05440 () | 1208199..1209392 | - | 1194 | WP_013140879.1 | recombinase RecA | - |
| BL5934_RS05445 () | 1209693..1209926 | - | 234 | WP_007052642.1 | DUF3046 domain-containing protein | - |
| BL5934_RS05450 () | 1210038..1210553 | - | 516 | WP_007052641.1 | helix-turn-helix transcriptional regulator | - |
| BL5934_RS05455 () | 1210613..1211146 | - | 534 | WP_007052640.1 | CinA family protein | - |
| BL5934_RS05460 () | 1211158..1211793 | - | 636 | WP_007052639.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| BL5934_RS05465 () | 1211970..1214879 | - | 2910 | WP_007052638.1 | DNA translocase FtsK | - |
| BL5934_RS05470 () | 1215102..1215851 | + | 750 | WP_007056215.1 | Fic family protein | - |
| BL5934_RS05475 () | 1215885..1216871 | - | 987 | WP_007052636.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| BL5934_RS05480 () | 1216882..1218336 | - | 1455 | WP_007052635.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| BL5934_RS05485 () | 1218468..1219208 | + | 741 | WP_007056209.1 | GTP pyrophosphokinase family protein | - |
| BL5934_RS05490 () | 1219241..1220257 | - | 1017 | WP_007052632.1 | DMT family transporter | - |
| BL5934_RS05495 () | 1220397..1221296 | - | 900 | WP_007052631.1 | Bax inhibitor-1/YccA family protein | - |
| BL5934_RS05500 () | 1221477..1222322 | - | 846 | WP_007052630.1 | DUF5067 domain-containing protein | - |
| BL5934_RS05505 () | 1222657..1223889 | + | 1233 | WP_007056207.1 | sensor histidine kinase | - |
| BL5934_RS05510 () | 1223924..1224649 | + | 726 | WP_007056206.1 | response regulator transcription factor | - |
| BL5934_RS05515 () | 1224689..1225330 | + | 642 | WP_007052627.1 | GNAT family N-acetyltransferase | - |
| BL5934_RS05520 () | 1225420..1227525 | + | 2106 | WP_193020038.1 | DUF262 domain-containing protein | - |
| BL5934_RS05525 () | 1227575..1228066 | - | 492 | WP_007052625.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BL5934_RS05530 () | 1228063..1228455 | - | 393 | WP_013410773.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BL5934_RS05535 () | 1228600..1231299 | - | 2700 | WP_114555089.1 | aconitate hydratase AcnA | - |
| BL5934_RS05540 () | 1231417..1234005 | - | 2589 | WP_100985104.1 | cation-translocating P-type ATPase | - |
| BL5934_RS05545 () | 1234096..1234791 | - | 696 | WP_007055252.1 | hypothetical protein | - |
| BL5934_RS05550 () | 1234803..1236071 | - | 1269 | WP_193020277.1 | RsmD family RNA methyltransferase | - |
| BL5934_RS05555 () | 1236061..1236819 | - | 759 | WP_014485550.1 | DUF3159 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|