MGE detailed information
MGE type: IScluster/Tn MGE length: 13828 bp
Accession: NZ_CP062900 Location: 72663..86490 Organism: Escherichia coli strain Res13-Lact-ER02-39 Replicon: plasmid unnamednovel_0
Accession: NZ_CP062900 Location: 72663..86490 Organism: Escherichia coli strain Res13-Lact-ER02-39 Replicon: plasmid unnamednovel_0
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP38_RS24420 () | 67756..68367 | - | 612 | WP_029488843.1 | hypothetical protein | - |
| IMP38_RS24425 () | 68756..69133 | - | 378 | Protein_73 | transposase | - |
| IMP38_RS24430 () | 69504..70313 | - | 810 | WP_029488841.1 | hypothetical protein | - |
| IMP38_RS24435 () | 70899..71090 | - | 192 | WP_157895655.1 | hypothetical protein | - |
| IMP38_RS24440 () | 71587..72588 | + | 1002 | WP_029488840.1 | DUF2219 family protein | - |
| IMP38_RS24445 () | 72663..73568 | - | 906 | Protein_77 | IS3 family transposase ISCfr6 | Transposase |
| IMP38_RS24450 () | 73578..74729 | - | 1152 | WP_195706813.1 | IS30 family transposase IS30D | Transposase |
| IMP38_RS24455 () | 74797..75099 | - | 303 | Protein_79 | IS3 family transposase ISEc31 | Transposase |
| IMP38_RS24460 () | 75135..75332 | - | 198 | Protein_80 | 3'-5' exonuclease | - |
| IMP38_RS24465 () | 75372..75653 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMP38_RS24470 () | 75650..75919 | - | 270 | WP_000079923.1 | hypothetical protein | Antitoxin Detail |
| IMP38_RS24475 () | 76838..77694 | - | 857 | Protein_83 | incFII family plasmid replication initiator RepA | - |
| IMP38_RS24480 () | 77687..77761 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| IMP38_RS24485 () | 78008..78256 | - | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
| IMP38_RS24490 () | 78540..78746 | - | 207 | WP_032339099.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 78733..78794 | + | 62 | NuclAT_0 | - | - |
| - () | 78733..78794 | + | 62 | NuclAT_0 | - | - |
| - () | 78733..78794 | + | 62 | NuclAT_0 | - | - |
| - () | 78733..78794 | + | 62 | NuclAT_0 | - | - |
| IMP38_RS24495 () | 78969..79352 | - | 384 | Protein_87 | hypothetical protein | - |
| IMP38_RS24500 () | 79470..79916 | - | 447 | WP_032339098.1 | thermonuclease family protein | - |
| IMP38_RS24505 () | 80054..81328 | - | 1275 | Protein_89 | IS66 family transposase ISEc23 | Transposase |
| IMP38_RS24515 () | 82636..82980 | - | 345 | Protein_91 | IS66 family transposase ISEc23 | Transposase |
| IMP38_RS24520 () | 83011..83361 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| IMP38_RS24525 () | 83454..84131 | + | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| IMP38_RS24530 () | 84131..84478 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| IMP38_RS24535 () | 84498..86069 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| IMP38_RS24540 () | 86101..86490 | - | 390 | Protein_96 | IS66 family transposase ISEc23 | Transposase |
| IMP38_RS24545 () | 87219..87422 | - | 204 | WP_001327131.1 | hypothetical protein | - |
| IMP38_RS24550 () | 87577..88134 | - | 558 | WP_000139319.1 | fertility inhibition protein FinO | - |
| IMP38_RS24555 () | 88237..89097 | - | 861 | WP_063115579.1 | alpha/beta hydrolase | - |
| IMP38_RS24560 () | 89156..89902 | - | 747 | WP_032285008.1 | conjugal transfer pilus acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|